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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

87.219
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:123.1 nTPM
HPA Brain:264.6 nTPM
GTEx:123.1 nTPM
Pig:95.6 nTPM
Mouse:208.1 nTPM
Allen mouse:21.1 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA012602
Hypothalamus mean intensity 87.219
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 40.044
Periventricular hypothalamic nucleus 54.236
Supraoptic nucleus 63.732
Tuberal nucleus 66.515
Ventral tuberomammillary nucleus -
Lateral preoptic area 34.890
Medial preoptic area 50.421
Suprachiasmatic nucleus 57.213
Paraventricular hypothalamic nucleus 36.494
Anterior hypothalamic area, central 28.214
Ventral medial hypothalamic nucleus 51.023
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 80.249
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 44.589
Dorsal medial hypothalamic nucleus 43.761
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

264.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 264.6
2226 Male, age 75, left hemisphere 405.6
1961 Female, age 42, unknown 123.5
Dorsomedial nucleus
nTPM: 70.2
2041 Female, age 72, unknown 103.6
2017 Female, age 42, unknown 62.5
1989 Male, age 62, unknown 44.5
Lateral hypothalamic area
nTPM: 182.3
2271 Male, age 75, both hemispheres 304.5
2228 Male, age 66, unknown 189.4
1791 Male, age 80, right hemisphere 146.7
2412 Male, age 62, unknown 88.4
Mammillary body
nTPM: 54.5
1948 Female, age 72, unknown 76.1
1923 Female, age 72, unknown 66.9
2413 Male, age 66, unknown 59.6
1834 Female, age 42, unknown 39.2
1945 Male, age 80, right hemisphere 30.8
Paraventricular nucleus
nTPM: 105.1
2700 Male, age 62, unknown 105.1
Preoptic area
nTPM: 78.6
2414 Female, age 72, unknown 91.2
1907 Male, age 80, right hemisphere 87.4
1861 Female, age 42, unknown 57.1
Supraoptic nucleus
nTPM: 67.5
2835 Female, age 72, unknown 100.8
1894 Female, age 72, unknown 60.1
2043 Male, age 62, unknown 41.6
Ventromedial nucleus
nTPM: 100.2
1982 Female, age 72, unknown 100.2
1822 Female, age 42, unknown 100.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

123.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 123.1
Samples: 202

Max nTPM: 450.6
Min nTPM: 3.4
Std nTPM: 92.6
Median nTPM: 108.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 450.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 450.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 441.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 413.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 408.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 387.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 330.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 327.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 303.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 298.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 292.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 291.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 288.8
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 285.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 282.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 269.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 265.0
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 250.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 250.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 249.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 241.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 238.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 233.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 230.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 228.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 219.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 216.9
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 212.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 209.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 207.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 206.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 204.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 202.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 200.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 199.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 198.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 196.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 191.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 191.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 190.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 190.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 188.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 186.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 182.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 181.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 180.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 178.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 172.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 170.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 170.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 170.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 166.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 164.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 163.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 163.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 161.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 159.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 156.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 156.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 155.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 154.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 152.7
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 152.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 152.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 150.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 149.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 146.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 146.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 145.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 145.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 144.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 142.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 141.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 140.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 139.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 138.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 138.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 136.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 135.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 132.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 132.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 129.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 128.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 126.1
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 123.7
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 122.5
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 121.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 119.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 119.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 118.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 117.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 116.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 116.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 116.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 116.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 115.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 115.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 114.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 111.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 111.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 110.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 107.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 106.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 105.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 104.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 104.0
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 101.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 99.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 99.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 98.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 97.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 94.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 94.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 94.1
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 94.0
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 92.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 89.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 88.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 86.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 86.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 85.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 83.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 82.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 81.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 79.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 75.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 74.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 74.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 72.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 71.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 69.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 69.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 67.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 67.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 66.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 65.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 63.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 63.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 63.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 62.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 60.5
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 60.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 60.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 60.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 58.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 56.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 56.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 55.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 54.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 53.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 51.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 50.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 50.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 49.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 48.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 48.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 45.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 43.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 42.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 42.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 42.3
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 37.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 37.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 36.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 36.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 36.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 35.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 35.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 33.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 33.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 33.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 32.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 31.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 31.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 29.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 28.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 28.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 27.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 27.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 26.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 24.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 21.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 21.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 20.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 20.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 20.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 19.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 19.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 18.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 18.3
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 17.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 16.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 15.7
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 15.1
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 9.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 7.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 7.3
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 6.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 6.8
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 6.3
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 3.8
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 3.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 95.7
Samples: 4

Max nTPM: 109.0
Min nTPM: 64.5
Sample A Female 109.0
Sample B Female 104.0
Sample C Male 105.1
Sample D Male 64.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

208.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 208.1
Samples: 4

Max nTPM: 219.3
Min nTPM: 195.0
Sample A Male 219.3
Sample B Male 212.0
Sample C Female 206.2
Sample D Female 195.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

21.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 21.1
70743886 Antisense, RP_050725_01_H10, Mouse strain C57BL/6J (56 days, male) 21.1
73834103 Antisense, RP_050725_01_H10, Mouse strain C57BL/6J (56 days, male) 19.2

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