We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
IGBP1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • IGBP1
TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Low
Ovarian stroma cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:121.3 nTPM
HPA:121.3 nTPM
GTEx:97.7 nTPM
FANTOM5:175.3 Scaled Tags Per Million

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000634Antibody HPA001004Antibody CAB034139
Follicle cells LowLow-
Ovarian stroma cells LowNot detectedNot detected






OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

121.3
overview
Female, age 64
Ovary sample 192
nTPM: 92.6
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 125.7
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 128
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 111.1
N/A
Female, age 16
Ovary sample 3663
nTPM: 166.3
N/A
Female, age 20
Ovary sample 3664
nTPM: 118.8
N/A
Female, age 32
Ovary sample 3665
nTPM: 106.7

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.7
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 97.7
Samples: 180

Max nTPM: 290.6
Min nTPM: 29.1
Std nTPM: 42.3
Median nTPM: 90.0
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 290.6
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 233.9
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 229.4
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 228.2
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 224.8
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 203.1
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 201.6
GTEX-183WM-1926-SM-72D5F 70-79 years, female 201.1
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 188.2
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 187.2
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 178.3
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 172.8
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 168.0
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 163.7
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 162.6
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 162.0
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 151.3
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 150.3
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 149.9
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 143.8
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 142.8
GTEX-QVJO-3126-SM-COH22 60-69 years, female 142.7
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 141.1
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 139.7
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 137.8
GTEX-RU72-2226-SM-46MUE 50-59 years, female 133.0
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 132.9
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 130.3
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 129.8
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 129.7
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 129.5
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 126.1
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 125.9
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 125.1
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 124.5
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 124.1
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 124.0
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 123.1
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 122.6
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 122.4
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 119.9
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 119.1
GTEX-13SLX-2426-SM-664OM 50-59 years, female 115.8
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 114.8
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 114.7
GTEX-15EOM-1526-SM-68723 20-29 years, female 114.5
GTEX-14BIN-1426-SM-664NI 50-59 years, female 114.3
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 114.2
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 114.2
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 113.4
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 113.1
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 111.9
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 108.9
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 108.2
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 106.2
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 106.1
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 105.5
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 104.5
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 104.4
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 104.2
GTEX-18D9A-0826-SM-718C1 30-39 years, female 104.0
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 103.6
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 103.4
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 102.8
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 102.2
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 101.3
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 101.1
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 98.5
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 98.3
GTEX-P78B-1926-SM-3P616 40-49 years, female 98.2
GTEX-13X6H-1026-SM-5SIBE 50-59 years, female 98.1
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 97.8
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 97.2
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 97.1
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 96.6
GTEX-14PKV-1226-SM-6871T 20-29 years, female 96.2
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 95.3
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 95.1
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 94.9
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 94.9
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 94.2
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 93.5
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 93.4
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 92.9
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 92.7
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 92.3
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 90.4
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 90.2
GTEX-S32W-1226-SM-4AD67 50-59 years, female 90.2
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 90.1
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 89.8
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 88.0
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 87.7
GTEX-11I78-1926-SM-59878 50-59 years, female 87.5
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 87.1
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 86.8
GTEX-Q734-0726-SM-48TZP 40-49 years, female 86.7
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 85.8
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 85.0
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 83.9
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 83.6
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 83.5
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 83.2
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 81.5
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 81.5
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 80.8
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 80.8
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 80.6
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 80.4
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 80.3
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 80.1
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 79.3
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 78.9
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 78.8
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 78.4
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 77.9
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 77.5
GTEX-145ME-1226-SM-5SIB6 40-49 years, female 77.4
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 76.8
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 76.6
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 76.3
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 75.7
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 75.0
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 74.7
GTEX-WI4N-2526-SM-4OOSE 40-49 years, female 74.0
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 74.0
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 73.9
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 72.5
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 70.9
GTEX-1399S-2126-SM-5J2MH 30-39 years, female 70.7
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 70.3
GTEX-S341-0726-SM-4AD5R 40-49 years, female 70.0
GTEX-1GN1U-2326-SM-9MQK4 50-59 years, female 69.8
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 69.0
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 68.3
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 68.2
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 67.7
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 67.6
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 67.5
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 67.1
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 67.0
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 66.9
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 66.9
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 66.0
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 65.4
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 64.1
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 64.0
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 63.6
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 63.0
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 62.7
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 62.5
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 62.3
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 61.1
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 60.1
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 59.0
GTEX-QCQG-1426-SM-48U22 50-59 years, female 58.9
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 57.0
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 57.0
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 55.5
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 55.1
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 54.6
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 54.4
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 53.2
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 52.2
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 52.1
GTEX-1LVAN-2726-SM-CNPQG 50-59 years, female 52.1
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 51.0
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 50.4
GTEX-1GF9X-2426-SM-7SB7W 40-49 years, female 49.0
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 47.7
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 47.2
GTEX-14JG6-0626-SM-68716 30-39 years, female 46.5
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 46.1
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 45.8
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 43.7
GTEX-ZV6S-1426-SM-59HKX 40-49 years, female 42.2
GTEX-1F88F-2126-SM-9KNUK 60-69 years, female 38.2
GTEX-R55G-1526-SM-48FER 40-49 years, female 38.1
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 35.8
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 29.1
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

175.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 175.3
FF:10020-101D2 47,75,84 years, female 175.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org