We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CDIP1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • CDIP1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:118.4 nTPM
HPA Brain:97.2 nTPM
GTEx:118.4 nTPM
Pig:117.7 nTPM
Mouse:234.2 nTPM
Allen mouse:19.2 Expression energy

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 78.6
1961 Female, age 42, unknown 78.7
2226 Male, age 75, left hemisphere 78.4
Dorsomedial nucleus
nTPM: 95.2
1989 Male, age 62, unknown 121.7
2041 Female, age 72, unknown 84.8
2017 Female, age 42, unknown 79.1
Lateral hypothalamic area
nTPM: 97.2
1791 Male, age 80, right hemisphere 109.7
2412 Male, age 62, unknown 94.4
2271 Male, age 75, both hemispheres 93.4
2228 Male, age 66, unknown 91.2
Mammillary body
nTPM: 89.7
1923 Female, age 72, unknown 106.6
2413 Male, age 66, unknown 97.1
1834 Female, age 42, unknown 85.0
1948 Female, age 72, unknown 84.9
1945 Male, age 80, right hemisphere 75.0
Paraventricular nucleus
nTPM: 93.4
2700 Male, age 62, unknown 93.4
Preoptic area
nTPM: 85.5
1907 Male, age 80, right hemisphere 90.7
1861 Female, age 42, unknown 84.9
2414 Female, age 72, unknown 80.9
Supraoptic nucleus
nTPM: 85.4
2835 Female, age 72, unknown 105.6
1894 Female, age 72, unknown 79.1
2043 Male, age 62, unknown 71.6
Ventromedial nucleus
nTPM: 85.2
1982 Female, age 72, unknown 90.6
1822 Female, age 42, unknown 79.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 118.4
Samples: 202

Max nTPM: 210.4
Min nTPM: 30.6
Std nTPM: 30.6
Median nTPM: 118.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 210.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 199.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 195.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 195.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 192.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 187.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 185.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 184.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 170.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 164.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 161.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 161.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 160.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 159.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 158.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 158.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 156.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 156.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 155.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 155.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 154.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 154.9
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 152.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 150.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 149.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 149.1
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 148.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 148.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 148.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 148.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 147.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 146.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 146.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 144.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 144.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 144.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 143.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 143.6
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 143.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 142.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 142.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 141.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 141.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 141.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 141.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 141.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 139.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 139.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 138.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 138.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 138.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 137.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 137.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 137.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 137.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 136.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 136.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 134.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 134.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 133.9
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 132.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 132.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 132.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 132.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 131.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 131.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 131.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 130.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 130.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 129.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 128.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 128.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 128.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 127.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 127.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 127.3
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 127.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 127.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 126.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 126.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 125.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 124.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 124.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 124.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 124.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 124.1
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 123.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 123.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 123.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 122.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 121.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 121.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 121.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 120.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 120.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 120.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 119.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 119.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 119.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 119.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 118.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 118.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 118.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 117.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 116.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 116.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 116.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 116.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 115.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 115.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 115.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 115.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 114.5
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 114.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 113.8
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 113.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 112.7
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 112.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 112.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 112.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 111.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 111.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 110.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 110.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 110.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 109.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 108.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 108.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 108.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 108.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 108.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 107.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 107.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 107.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 107.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 107.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 107.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 105.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 105.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 105.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 104.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 104.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 103.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 102.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 102.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 102.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 102.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 101.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 101.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 101.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 101.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 100.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 100.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 98.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 98.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 98.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 97.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 97.2
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 97.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 96.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 95.8
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 94.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 94.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 94.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 94.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 94.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 94.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 94.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 93.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 92.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 91.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 91.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 89.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 88.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 88.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 86.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 81.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 81.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 80.9
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 80.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 79.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 79.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 78.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 76.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 75.6
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 74.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 73.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 72.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 68.3
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 68.2
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 67.4
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 64.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 60.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 60.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 59.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 58.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 58.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 57.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 57.0
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 42.7
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 36.6
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 30.6
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 117.7
Samples: 4

Max nTPM: 155.8
Min nTPM: 96.2
Sample A Female 155.8
Sample B Female 113.3
Sample C Male 105.6
Sample D Male 96.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

234.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 234.3
Samples: 4

Max nTPM: 245.9
Min nTPM: 223.1
Sample A Male 223.1
Sample B Male 244.7
Sample C Female 245.9
Sample D Female 223.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 19.2
413811 Antisense, RP_040809_01_F07, Mouse strain C57BL/6J (56 days, male) 19.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org