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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:130.1 nTPM
FANTOM5:131.5 Scaled Tags Per Million
Pig:114.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001527Antibody HPA005692Antibody CAB009538
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowLowLow






CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 130.1
Samples: 246

Max nTPM: 585.9
Min nTPM: 29.5
Std nTPM: 77.2
Median nTPM: 114.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 585.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 556.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 483.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 326.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 306.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 295.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 292.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 287.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 281.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 278.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 277.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 275.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 273.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 271.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 269.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 259.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 258.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 248.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 237.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 235.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 231.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 228.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 226.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 225.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 225.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 224.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 221.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 221.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 220.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 215.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 212.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 206.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 203.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 203.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 202.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 200.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 199.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 196.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 193.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 191.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 191.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 187.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 183.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 182.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 175.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 175.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 174.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 173.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 173.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 172.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 168.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 167.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 167.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 166.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 165.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 165.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 164.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 164.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 164.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 162.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 162.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 162.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 161.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 161.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 160.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 158.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 158.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 157.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 157.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 155.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 155.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 153.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 153.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 151.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 149.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 149.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 148.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 147.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 146.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 144.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 143.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 142.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 140.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 139.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 136.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 135.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 135.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 134.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 133.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 133.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 132.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 132.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 132.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 132.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 131.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 130.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 128.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 128.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 127.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 127.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 126.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 125.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 125.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 123.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 123.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 122.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 121.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 120.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 120.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 119.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 119.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 118.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 118.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 117.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 117.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 117.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 116.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 115.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 115.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 115.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 114.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 114.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 114.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 113.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 113.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 113.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 112.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 112.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 111.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 110.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 110.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 108.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 108.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 106.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 106.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 106.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 106.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 105.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 104.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 104.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 104.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 103.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 103.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 103.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 102.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 102.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 99.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 99.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 98.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 98.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 98.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 97.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 95.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 92.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 92.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 91.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 91.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 91.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 90.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 89.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 89.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 89.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 88.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 86.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 85.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 85.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 85.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 84.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 84.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 84.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 84.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 83.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 82.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 81.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 81.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 81.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 80.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 80.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 79.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 79.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 78.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 78.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 78.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 77.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 77.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 76.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 75.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 74.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 74.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 74.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 73.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 73.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 73.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 72.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 71.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 71.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 71.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 70.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 70.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 69.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 68.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 67.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 66.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 66.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 66.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 66.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 66.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 65.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 65.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 64.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 64.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 62.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 62.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 61.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 61.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 60.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 60.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 60.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 60.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 59.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 59.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 59.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 57.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 57.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 56.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 56.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 56.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 54.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 53.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 53.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 50.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 50.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 49.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 49.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 49.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 49.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 48.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 46.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 45.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 43.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 43.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 40.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 34.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 34.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 34.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 29.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

131.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 131.5
FF:10164-103B2 76 years, female 131.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.5
Pig sample Sample description nTPM
Caudate
nTPM: 114.5
Samples: 4

Max nTPM: 135.1
Min nTPM: 98.6
Sample A Female 135.1
Sample B Female 98.6
Sample C Male 110.1
Sample D Male 114.3

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