HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:57.2 nTPM
HPA Brain:39.6 nTPM
GTEx:57.2 nTPM
FANTOM5:95.2 Scaled Tags Per Million
Pig:31.7 nTPM
Mouse:74.0 nTPM
Allen mouse:10.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024032
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 39.6
Sample id Sample description nTPM
Hippocampus
nTPM: 35.9
1898 Male, age 80, left hemisphere 43.7
1855 Male, age 76, left hemisphere 37.6
2621 Female, age 67, right hemisphere 36.6
2529 Female, age 94, left hemisphere 34.3
2148 Female, age 91, left hemisphere 31.7
1911 Female, age 85, right hemisphere 31.6
Dentate gyrus
nTPM: 34.0
2530 Female, age 94, left hemisphere 38.0
2010 Male, age 76, both hemispheres 37.5
2246 Female, age 85, both hemispheres 34.6
1927 Female, age 91, both hemispheres 34.2
2531 Female, age 67, both hemispheres 30.8
2528 Male, age 74, both hemispheres 29.1
Entorhinal gyrus
nTPM: 35.3
2764 Male, age 80, right hemisphere 39.2
1938 Female, age 85, left hemisphere 38.5
1787 Male, age 76, left hemisphere 36.0
2117 Female, age 91, right hemisphere 33.7
2686 Male, age 75, right hemisphere 33.6
2613 Female, age 94, left hemisphere 30.7
Hippocampus, CA1
nTPM: 39.6
2749 Male, age 80, left hemisphere 57.6
2527 Male, age 74, both hemispheres 38.4
1873 Female, age 85, both hemispheres 37.1
2045 Male, age 76, both hemispheres 33.1
2082 Female, age 91, right hemisphere 31.7
Hippocampus, CA2
nTPM: 36.3
1892 Male, age 76, both hemispheres 42.1
1963 Male, age 80, left hemisphere 41.3
2249 Male, age 74, both hemispheres 37.2
1940 Female, age 85, left hemisphere 34.1
2437 Female, age 94, left hemisphere 32.6
2113 Female, age 91, right hemisphere 30.6
Hippocampus, CA3
nTPM: 36.0
2137 Male, age 80, left hemisphere 42.4
1867 Male, age 76, both hemispheres 40.8
2436 Male, age 74, both hemispheres 39.3
2620 Female, age 94, left hemisphere 32.7
1891 Female, age 85, both hemispheres 32.5
2861 Female, age 67, both hemispheres 28.6
Parahippocampal cortex
nTPM: 34.8
1850 Male, age 80, both hemispheres 40.3
1933 Female, age 85, both hemispheres 39.2
2245 Female, age 91, both hemispheres 38.3
2250 Female, age 67, right hemisphere 36.2
1990 Female, age 91, right hemisphere 35.7
2532 Female, age 72, left hemisphere 34.2
2692 Male, age 74, both hemispheres 33.1
2622 Female, age 67, right hemisphere 31.7
2018 Male, age 76, both hemispheres 31.1
2693 Female, age 94, both hemispheres 28.7
Perirhinal gyrus
nTPM: 38.2
1847 Female, age 91, left hemisphere 42.5
1794 Male, age 80, right hemisphere 41.6
1841 Female, age 85, right hemisphere 38.4
2521 Female, age 94, right hemisphere 36.0
2848 Male, age 76, right hemisphere 32.5
Subiculum
nTPM: 34.3
1901 Male, age 80, both hemispheres 40.5
2042 Male, age 76, both hemispheres 36.0
1977 Female, age 85, both hemispheres 35.3
2619 Male, age 74, both hemispheres 32.9
2438 Female, age 94, left hemisphere 32.8
2729 Female, age 91, right hemisphere 28.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 57.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.2
Samples: 197

Max nTPM: 135.1
Min nTPM: 23.4
Std nTPM: 15.9
Median nTPM: 55.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 135.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 105.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 104.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 103.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 100.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 97.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 93.5
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 87.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 86.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 84.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 83.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 95.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 95.2
FF:10169-103B7 60 years, female 117.3
FF:10153-102I9 76 years, female 73.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 31.7
Pig sample Sample description nTPM
Subiculum
nTPM: 29.7
Samples: 4

Max nTPM: 33.1
Min nTPM: 26.2
Sample A Female 33.1
Sample B Female 30.6
Sample C Male 28.8
Sample D Male 26.2
Dorsal hippocampus
nTPM: 30.2
Samples: 4

Max nTPM: 34.4
Min nTPM: 27.1
Sample A Female 34.4
Sample B Female 27.1
Sample C Male 30.7
Sample D Male 28.4
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 33.9
Min nTPM: 27.6
Sample A Female 32.3
Sample B Female 33.9
Sample C Male 27.6
Sample D Male 33.0
Ventral hippocampus
nTPM: 28.4
Samples: 4

Max nTPM: 30.3
Min nTPM: 25.8
Sample A Female 28.3
Sample B Female 25.8
Sample C Male 30.3
Sample D Male 29.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 74.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.0
Samples: 4

Max nTPM: 79.6
Min nTPM: 69.4
Sample A Male 74.8
Sample B Male 72.0
Sample C Female 69.4
Sample D Female 79.6
Hippocampal formation
nTPM: 71.0
Samples: 4

Max nTPM: 80.6
Min nTPM: 65.5
Sample A Male 80.6
Sample B Male 71.4
Sample C Female 66.4
Sample D Female 65.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
69014949 Antisense, RP_050310_02_A09, Mouse strain C57BL/6J (56 days, male) 10.7

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