We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
HNRNPC
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • HNRNPC
TISSUE PRIMARY DATA BREAST Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Breast
Tissue proteome
Breast
BREAST - Expression summary
Protein expression
Breasti

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Adipocytes: High
Glandular cells: High
Myoepithelial cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:319.6 nTPM
HPA:319.6 nTPM
GTEx:244.3 nTPM
FANTOM5:18.5 Scaled Tags Per Million

BREAST - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051075Antibody CAB005223Antibody CAB075755Antibody CAB075756
Adipocytes MediumHighMediumLow
Glandular cells HighHighMediumMedium
Myoepithelial cells HighHighMediumMedium









BREAST - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

319.6
overview
Female, age 52
Breast sample 373
nTPM: 314.8
Cell types%
Glandular cells:
15

Adipocytes:
5

Other cell types:
80

overview
Female, age 80
Breast sample 390
nTPM: 199.4
Cell types%
Glandular cells:
5

Adipocytes:
15

Other cell types:
80

overview
Female, age 47
Breast sample 405
nTPM: 404.2
Cell types%
Glandular cells:
5

Adipocytes:
5

Other cell types:
90

overview
Female, age 38
Breast sample 410
nTPM: 360.2
Cell types%
Glandular cells:
40

Adipocytes:
5

Other cell types:
55


BREAST - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

244.3
GTEx sample id Sample description nTPM
Breast - Mammary Tissue
Average nTPM: 244.3
Samples: 459

Max nTPM: 524.3
Min nTPM: 145.5
Std nTPM: 52.5
Median nTPM: 233.8
GTEX-15G19-2126-SM-6M48J 60-69 years, male 524.3
GTEX-1N2EF-2226-SM-E9J33 60-69 years, male 457.9
GTEX-1IDFM-0426-SM-B2LVV 60-69 years, male 445.1
GTEX-1HCU7-1026-SM-ADEIP 50-59 years, male 425.6
GTEX-1ICLZ-0426-SM-B2LW2 60-69 years, male 416.3
GTEX-X62O-0526-SM-EWRMA 50-59 years, male 405.2
GTEX-1ICLY-1726-SM-B2LVT 50-59 years, male 397.8
GTEX-1QP29-1726-SM-E8VMQ 50-59 years, male 388.5
GTEX-1HCU8-0126-SM-ADEHH 60-69 years, female 387.5
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 385.2
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 379.5
GTEX-183WM-0726-SM-7LTAA 70-79 years, female 374.6
GTEX-1I1GP-0426-SM-COH3N 50-59 years, male 374.5
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 370.7
GTEX-1JJE9-2326-SM-ARL8Q 70-79 years, male 368.6
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 365.6
GTEX-14E6C-1326-SM-62LEQ 40-49 years, male 359.6
GTEX-1H1DG-0526-SM-9YFLN 70-79 years, male 357.2
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 356.1
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 353.5
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 352.6
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 349.5
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 347.5
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 346.5
GTEX-1A8G7-2426-SM-731AK 60-69 years, male 341.5
GTEX-1AMEY-1026-SM-718AA 30-39 years, female 341.4
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 339.7
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 334.1
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 334.1
GTEX-1HSMO-0826-SM-ADEIV 60-69 years, male 333.2
GTEX-1F5PK-2126-SM-7PC28 50-59 years, male 332.2
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 332.0
GTEX-14LLW-0626-SM-62LFC 70-79 years, female 330.3
GTEX-QEG5-0726-SM-D4P1T 20-29 years, male 329.7
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 329.0
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 328.5
GTEX-11P82-1326-SM-5HL62 20-29 years, male 327.0
GTEX-1I19N-2826-SM-CL55D 70-79 years, male 326.7
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 326.0
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 322.5
GTEX-14753-2426-SM-5LU8U 60-69 years, male 322.3
GTEX-17F97-2526-SM-7EWDV 50-59 years, male 321.8
GTEX-1IGQW-0926-SM-ADEH6 60-69 years, male 321.1
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 320.4
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 318.1
GTEX-1C6VS-0726-SM-7EPHF 60-69 years, male 317.7
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 317.3
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 311.9
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 311.7
GTEX-1MJK2-2226-SM-EVYCR 50-59 years, male 311.7
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 304.4
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 303.1
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 302.4
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 301.6
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 301.2
GTEX-ZLV1-1426-SM-DO92Z 60-69 years, female 300.1
GTEX-14BMU-1626-SM-5TDE7 20-29 years, female 299.9
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 299.4
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 297.1
GTEX-13SLX-2326-SM-5ZZWE 50-59 years, female 297.0
GTEX-14PHY-1926-SM-5YY95 60-69 years, female 295.9
GTEX-17EVQ-0426-SM-7LG57 70-79 years, male 295.8
GTEX-14H4A-2526-SM-5YYAY 40-49 years, female 295.2
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 294.9
GTEX-QEL4-2126-SM-447AE 50-59 years, male 294.2
GTEX-1M5QR-2526-SM-E9U5P 40-49 years, male 292.9
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 292.1
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 292.0
GTEX-1PPGY-1526-SM-EVYBK 60-69 years, male 291.1
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 290.9
GTEX-1HR9M-2426-SM-ACKXI 60-69 years, male 290.7
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 290.2
GTEX-1GZ2Q-2626-SM-7MXV9 40-49 years, male 290.2
GTEX-1JJEA-2726-SM-ARL8V 60-69 years, male 288.0
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 287.2
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 286.9
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 286.4
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 286.3
GTEX-ZLWG-1926-SM-DO92J 50-59 years, female 286.3
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 286.0
GTEX-13SLW-2526-SM-62LDQ 70-79 years, male 285.7
GTEX-1NV8Z-2826-SM-E8VME 60-69 years, male 284.3
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 283.6
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 283.0
GTEX-16NGA-0826-SM-718AF 40-49 years, female 282.9
GTEX-1M4P7-2626-SM-E9U5F 60-69 years, male 282.8
GTEX-1R9JW-0326-SM-EAZ45 30-39 years, female 281.9
GTEX-REY6-2426-SM-48FF5 60-69 years, male 281.5
GTEX-1KD5A-1926-SM-DKPQA 50-59 years, male 280.6
GTEX-1JN1M-3026-SM-CMKGK 60-69 years, female 279.4
GTEX-X261-0626-SM-3NMD9 50-59 years, male 279.0
GTEX-17HG3-0126-SM-7IGNH 30-39 years, female 278.9
GTEX-1192X-2326-SM-5987X 50-59 years, male 278.1
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 277.8
GTEX-1LVAM-0926-SM-E9TJ2 50-59 years, female 277.3
GTEX-1IE54-0626-SM-ARL8D 40-49 years, female 276.9
GTEX-1GMR8-0726-SM-9KNVI 50-59 years, female 276.5
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 276.1
GTEX-1KANA-2026-SM-DIPFB 20-29 years, male 275.1
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 274.5
GTEX-1PPH7-0826-SM-E8VNX 40-49 years, male 274.3
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 274.2
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 274.2
GTEX-11EI6-0626-SM-5985T 60-69 years, male 273.7
GTEX-14ICK-2426-SM-6EU27 40-49 years, male 273.7
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 273.4
GTEX-17JCI-0726-SM-7EPH1 60-69 years, female 273.3
GTEX-1F75I-2026-SM-7SB7N 40-49 years, male 273.1
GTEX-1LC47-1226-SM-D4P44 60-69 years, male 273.0
GTEX-1H1E6-0926-SM-9YFLT 30-39 years, male 272.7
GTEX-1GMR3-2626-SM-7RHHG 40-49 years, male 272.5
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 272.2
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 272.2
GTEX-1RLM8-2226-SM-EVYD1 50-59 years, male 271.7
GTEX-1ICG6-1326-SM-ACKWR 70-79 years, female 271.5
GTEX-17MF6-0326-SM-7EPH5 40-49 years, male 270.8
GTEX-1PDJ9-1126-SM-EXUSW 20-29 years, male 270.8
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 269.7
GTEX-1NUQO-2226-SM-E9U68 20-29 years, female 269.7
GTEX-1R9PN-0326-SM-DTX85 40-49 years, female 269.4
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 269.1
GTEX-17F96-2426-SM-7IGLN 70-79 years, male 268.9
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 268.6
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 268.3
GTEX-1R7EU-1226-SM-E8VMR 60-69 years, male 267.8
GTEX-1GF9X-1026-SM-ACKX2 40-49 years, female 267.4
GTEX-1CAMS-1426-SM-7IGPM 40-49 years, female 267.2
GTEX-1JMLX-2026-SM-CMKGN 50-59 years, male 266.8
GTEX-1LVAN-1326-SM-CNPQE 50-59 years, female 266.3
GTEX-15ER7-1626-SM-6PAMZ 20-29 years, female 266.2
GTEX-1POEN-0926-SM-DTX88 30-39 years, female 265.4
GTEX-117YX-1426-SM-5H12H 50-59 years, male 264.9
GTEX-1GN1W-1926-SM-7P8TH 50-59 years, female 264.6
GTEX-144GM-0926-SM-5O994 20-29 years, male 264.3
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 263.8
GTEX-1RQEC-2026-SM-DTXDM 60-69 years, male 263.8
GTEX-1IDJH-2226-SM-E6CJV 70-79 years, male 263.6
GTEX-1J8Q2-2726-SM-A9G2X 60-69 years, male 263.5
GTEX-1L5NE-2126-SM-CY8IH 50-59 years, male 263.5
GTEX-18A66-1726-SM-7LG5N 60-69 years, male 262.0
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 261.5
GTEX-1H11D-1526-SM-9MQJY 40-49 years, male 261.1
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 259.9
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 259.8
GTEX-14B4R-1226-SM-5TDDT 30-39 years, male 258.4
GTEX-18A7A-0726-SM-7LTAI 50-59 years, female 258.4
GTEX-R55D-0826-SM-48FEA 50-59 years, male 258.3
GTEX-RU72-0626-SM-46MUI 50-59 years, female 258.1
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 257.1
GTEX-1QMI2-0726-SM-E9J4F 60-69 years, male 257.0
GTEX-1LSNL-2826-SM-E9U5L 50-59 years, male 256.3
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 255.4
GTEX-15UF6-0126-SM-6PAMB 70-79 years, female 255.3
GTEX-1AX8Z-0926-SM-731AW 60-69 years, male 255.2
GTEX-14PN4-0626-SM-62LFP 50-59 years, male 255.1
GTEX-1JN6P-2426-SM-ARL99 60-69 years, male 254.9
GTEX-ZF3C-2326-SM-5S2NC 50-59 years, female 254.4
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 254.2
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 253.7
GTEX-1R46S-2526-SM-E8VN2 60-69 years, female 253.6
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 252.8
GTEX-145MF-2226-SM-7EPIR 50-59 years, male 252.4
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 251.6
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 251.5
GTEX-17EUY-1926-SM-7DUF6 20-29 years, male 250.9
GTEX-RU1J-0626-SM-4WAWY 20-29 years, female 250.9
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 249.8
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 249.7
GTEX-15EOM-5019-SM-793DK 20-29 years, female 249.4
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 249.4
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 249.2
GTEX-14PJO-0726-SM-69LO8 60-69 years, male 249.1
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 248.7
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 248.6
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 248.5
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 248.4
GTEX-1MCC2-2126-SM-EWRON 30-39 years, female 248.1
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 247.7
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 247.7
GTEX-1KAFJ-0226-SM-DIPEL 50-59 years, male 247.7
GTEX-1EU9M-2826-SM-7EWFH 60-69 years, male 247.1
GTEX-ZLFU-2126-SM-DO931 40-49 years, male 246.6
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 246.1
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 245.7
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 245.7
GTEX-13113-5013-SM-7SB7G 60-69 years, female 245.4
GTEX-1CB4J-1826-SM-7EWF9 60-69 years, male 244.5
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 244.3
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 244.0
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 243.9
GTEX-1QEPI-0926-SM-DTXF3 60-69 years, female 243.8
GTEX-1H1CY-2226-SM-9WG7E 60-69 years, female 243.6
GTEX-13VXU-2826-SM-664MA 50-59 years, male 243.4
GTEX-1JMOU-2026-SM-CMKGU 60-69 years, female 243.4
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 242.9
GTEX-11OF3-1926-SM-59889 60-69 years, male 242.8
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 242.7
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 242.5
GTEX-13QJ3-0826-SM-7DHKK 50-59 years, male 242.2
GTEX-1I1GU-1026-SM-ADEHJ 40-49 years, male 241.0
GTEX-1HR98-0426-SM-COH36 60-69 years, male 240.9
GTEX-1HSKV-2026-SM-CMKGX 60-69 years, male 240.9
GTEX-1LGRB-1826-SM-CNPQL 50-59 years, female 240.2
GTEX-15SHW-1326-SM-6PAL8 60-69 years, male 239.9
GTEX-17KNJ-2026-SM-7LG53 50-59 years, male 239.8
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 239.7
GTEX-1GPI7-0926-SM-7PC3J 20-29 years, male 239.7
GTEX-1K9T9-1426-SM-DIPFQ 50-59 years, female 239.7
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 239.4
GTEX-1B8KZ-1526-SM-7DUG7 50-59 years, male 239.1
GTEX-TML8-1226-SM-32QON 40-49 years, female 238.7
GTEX-183FY-1126-SM-7DHLJ 20-29 years, male 238.3
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 237.9
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 237.5
GTEX-1RAZQ-1226-SM-EWRNL 30-39 years, male 237.5
GTEX-1S82Z-0726-SM-E6CHX 30-39 years, female 237.3
GTEX-1QW4Y-1026-SM-DTXE2 30-39 years, male 237.1
GTEX-1I6K6-0826-SM-ARL7Z 30-39 years, male 236.9
GTEX-1B932-0826-SM-73KXG 40-49 years, female 236.7
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 236.5
GTEX-1JMPZ-1626-SM-COH31 30-39 years, male 236.5
GTEX-YECK-0726-SM-EZ6LV 60-69 years, male 236.1
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 235.3
GTEX-1HC8U-0826-SM-ADEIL 40-49 years, female 235.2
GTEX-14PKU-0426-SM-6EU1P 40-49 years, female 235.1
GTEX-14E7W-0826-SM-62LEJ 70-79 years, male 234.8
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 234.8
GTEX-15ETS-0626-SM-7KUMX 40-49 years, female 234.5
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 234.4
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 233.8
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 233.6
GTEX-18D9A-1526-SM-7LG4J 30-39 years, female 233.2
GTEX-1LNCM-0226-SM-DIPF4 50-59 years, female 233.2
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 233.1
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 233.1
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 233.0
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 232.7
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 232.7
GTEX-14A5I-0726-SM-5TDEB 50-59 years, female 232.5
GTEX-1K2DA-1726-SM-CGQGS 50-59 years, male 232.2
GTEX-1MA7W-1026-SM-DKPQK 20-29 years, female 232.2
GTEX-1C64O-0726-SM-7DUFU 60-69 years, male 232.0
GTEX-1H23P-0726-SM-9WG7K 60-69 years, male 231.8
GTEX-17MFQ-0926-SM-7LG4S 20-29 years, male 231.7
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 231.2
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 230.7
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 230.2
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 229.1
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 229.1
GTEX-1A3MV-1626-SM-731C1 30-39 years, male 229.0
GTEX-ZDTT-2126-SM-DKPOM 60-69 years, male 228.5
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 228.4
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 228.4
GTEX-1R7EV-1526-SM-E8VOD 40-49 years, male 228.3
GTEX-1CB4E-0226-SM-79OLW 60-69 years, male 228.0
GTEX-1HT8W-2226-SM-CGQEC 30-39 years, male 227.8
GTEX-1IKJJ-2326-SM-COH3U 60-69 years, male 227.8
GTEX-1GF9V-2526-SM-7SB8K 60-69 years, male 227.7
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 227.5
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 227.4
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 227.3
GTEX-169BO-1126-SM-7MGWN 50-59 years, male 227.1
GTEX-1HBPM-0126-SM-ARL9E 60-69 years, female 226.9
GTEX-1HCVE-2626-SM-ADEJ8 50-59 years, male 226.9
GTEX-1HKZK-1826-SM-ADEJ2 40-49 years, male 226.9
GTEX-1IOXB-1926-SM-ARL8E 50-59 years, male 226.9
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 226.8
GTEX-1OKEX-0826-SM-E9J2B 60-69 years, male 225.4
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 225.2
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 225.0
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 224.9
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 224.7
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 224.6
GTEX-1C6VQ-0426-SM-79OOX 50-59 years, male 224.3
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 224.3
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 223.9
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 223.8
GTEX-1KD4Q-2326-SM-D4P3M 40-49 years, male 223.5
GTEX-1QPFJ-2026-SM-EVYBE 30-39 years, female 223.3
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 223.2
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 223.0
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 223.0
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 223.0
GTEX-1IKOE-1326-SM-CE6T6 30-39 years, female 222.6
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 222.5
GTEX-1J8QM-2026-SM-ARZMW 60-69 years, female 222.4
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 222.3
GTEX-15UF7-0726-SM-6M46D 40-49 years, male 222.2
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 222.1
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 222.1
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 221.5
GTEX-1R9PM-1826-SM-EVYBH 20-29 years, male 221.3
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 221.1
GTEX-15RJE-2626-SM-7KFT1 40-49 years, male 220.7
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 220.0
GTEX-1GZ4I-2826-SM-9MQK5 50-59 years, male 220.0
GTEX-1GMRU-0826-SM-9WYT7 50-59 years, male 219.3
GTEX-1I4MK-1626-SM-CM2TJ 50-59 years, female 219.0
GTEX-1GF9U-1726-SM-7MGY5 40-49 years, female 218.7
GTEX-1NHNU-0926-SM-E9J2T 50-59 years, male 218.6
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 218.5
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 218.3
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 218.1
GTEX-1IDJE-0826-SM-CKZNZ 50-59 years, female 218.1
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 217.9
GTEX-1GZHY-0726-SM-9WG6B 50-59 years, female 217.1
GTEX-1LG7Z-0726-SM-CXKYD 30-39 years, male 217.1
GTEX-1JK1U-1826-SM-ARL8W 60-69 years, male 216.9
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 216.8
GTEX-17GQL-0326-SM-7LG5U 60-69 years, male 216.8
GTEX-1F5PL-1026-SM-7RHI1 40-49 years, female 216.8
GTEX-1H3VY-0926-SM-ACKXE 50-59 years, male 216.8
GTEX-1JMPY-0526-SM-CL54O 30-39 years, male 216.8
GTEX-1HFI7-0126-SM-CGQFQ 50-59 years, female 214.9
GTEX-18QFQ-0826-SM-718AX 30-39 years, male 214.7
GTEX-1QP28-1226-SM-E9J2M 50-59 years, female 214.2
GTEX-17F98-0526-SM-79OK5 40-49 years, female 214.0
GTEX-1GN1U-0526-SM-9KNTT 50-59 years, female 214.0
GTEX-1B933-2526-SM-7IGO5 50-59 years, female 213.5
GTEX-1I1GT-1126-SM-ARL7J 60-69 years, female 213.4
GTEX-1QCLY-1626-SM-DTXDW 30-39 years, male 213.0
GTEX-1N5O9-1126-SM-DTXEQ 60-69 years, male 212.9
GTEX-1LBAC-0926-SM-CXKY9 20-29 years, male 212.7
GTEX-1HSGN-1526-SM-A9SMO 40-49 years, female 212.6
GTEX-11P81-1926-SM-5BC53 30-39 years, female 212.4
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 212.4
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 211.6
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 210.7
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 210.4
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 210.3
GTEX-14BMV-0626-SM-793AU 50-59 years, male 210.1
GTEX-WFON-1826-SM-3GILG 40-49 years, male 210.1
GTEX-WFG8-2026-SM-EXOHO 20-29 years, male 210.1
GTEX-Z9EW-1526-SM-EZ6LU 40-49 years, male 210.1
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 209.8
GTEX-1BAJH-0826-SM-7EWEF 70-79 years, male 209.6
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 209.4
GTEX-QVJO-1826-SM-447C9 60-69 years, female 208.8
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 208.6
GTEX-1LSVX-2426-SM-E6CJX 60-69 years, male 208.6
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 208.4
GTEX-1N2EE-2126-SM-E8VNN 60-69 years, male 208.3
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 208.0
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 207.9
GTEX-1HSEH-2026-SM-ADEHN 60-69 years, male 207.9
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 207.8
GTEX-S341-1526-SM-4AD6K 40-49 years, female 207.8
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 207.2
GTEX-1F75B-0626-SM-7SB8A 50-59 years, male 206.8
GTEX-1HCUA-0726-SM-ACKVU 50-59 years, female 206.4
GTEX-111YS-1926-SM-5GICC 60-69 years, male 206.0
GTEX-1GZ4H-0326-SM-7P8QX 50-59 years, female 205.4
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 205.2
GTEX-T6MN-0726-SM-32PML 50-59 years, male 204.9
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 204.7
GTEX-R53T-1526-SM-48FEK 50-59 years, female 204.7
GTEX-V955-2026-SM-3GAFA 60-69 years, male 204.5
GTEX-1GPI6-0626-SM-7RHHJ 60-69 years, male 204.5
GTEX-QMRM-1626-SM-D4P1U 50-59 years, male 204.0
GTEX-1EKGG-2626-SM-7IGPY 60-69 years, male 203.9
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 203.5
GTEX-1J8EW-2626-SM-CL53E 60-69 years, female 203.2
GTEX-17EVP-0226-SM-79OND 40-49 years, male 203.0
GTEX-11GSP-0926-SM-9WYSG 60-69 years, female 203.0
GTEX-1IDJU-1826-SM-CMKHV 60-69 years, female 203.0
GTEX-1A3MX-2726-SM-718B6 60-69 years, male 202.8
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 201.9
GTEX-1QCLZ-2326-SM-DTXDO 60-69 years, female 201.6
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 201.1
GTEX-1JMQK-2626-SM-COH2W 60-69 years, male 201.0
GTEX-1B8SG-1226-SM-7IGPF 50-59 years, male 200.9
GTEX-1GN2E-2226-SM-9WG6J 60-69 years, male 200.0
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 199.8
GTEX-ZGAY-1726-SM-DO91P 40-49 years, female 199.6
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 199.4
GTEX-1LSNM-1326-SM-E9TJ1 50-59 years, male 199.3
GTEX-16BQI-1026-SM-7KUEA 30-39 years, female 198.9
GTEX-17HHE-1426-SM-7EPH4 50-59 years, male 198.5
GTEX-1E2YA-2726-SM-7IGPW 50-59 years, male 198.3
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 198.1
GTEX-1QP9N-1826-SM-E8VMP 30-39 years, male 198.0
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 197.2
GTEX-WHSB-1926-SM-EXOHH 50-59 years, male 197.2
GTEX-1F75A-1826-SM-7SB8G 50-59 years, male 197.1
GTEX-1P4AB-1826-SM-E76PU 50-59 years, male 197.1
GTEX-18A6Q-0926-SM-7LG4N 60-69 years, male 197.0
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 196.8
GTEX-ZTPG-2826-SM-57WGA 20-29 years, female 196.8
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 195.3
GTEX-1AX9I-0726-SM-73KWV 60-69 years, male 195.2
GTEX-1JKYN-0726-SM-ARZMY 30-39 years, male 195.1
GTEX-1B97I-0426-SM-79OL7 40-49 years, male 194.7
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 194.7
GTEX-1KANC-1426-SM-CYPT9 50-59 years, female 194.2
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 194.1
GTEX-1HCU9-0326-SM-9WYSC 20-29 years, male 194.1
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 193.3
GTEX-1KXAM-1026-SM-CY8IA 60-69 years, male 193.3
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 193.2
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 192.8
GTEX-17F9E-2526-SM-7MGW2 50-59 years, male 192.8
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 192.7
GTEX-1122O-1226-SM-5H113 60-69 years, female 192.1
GTEX-13PVR-2226-SM-7DHKP 60-69 years, female 192.1
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 191.7
GTEX-1I1HK-2426-SM-ADEHX 60-69 years, male 191.6
GTEX-1JKYR-0926-SM-CMKGJ 20-29 years, male 191.4
GTEX-16YQH-2826-SM-6PAMY 30-39 years, male 191.3
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 190.9
GTEX-1HUB1-1626-SM-CM2SL 60-69 years, male 190.1
GTEX-1MA7X-1626-SM-E9U5B 60-69 years, male 189.9
GTEX-XBED-1626-SM-47JYN 60-69 years, male 189.2
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 189.2
GTEX-15FZZ-0726-SM-7KUFZ 30-39 years, female 188.5
GTEX-1AX9J-1126-SM-731B7 60-69 years, male 188.1
GTEX-14PJ4-2126-SM-6ETZJ 60-69 years, male 187.7
GTEX-1CB4G-2326-SM-79OOI 60-69 years, male 187.5
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 187.1
GTEX-1H4P4-2226-SM-9MQKQ 50-59 years, male 186.8
GTEX-17HGU-1326-SM-79OKB 50-59 years, male 185.9
GTEX-1CAMR-1426-SM-793BO 20-29 years, male 184.3
GTEX-1IKOH-2326-SM-CM2TW 60-69 years, female 184.2
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 183.9
GTEX-1IDJF-2326-SM-ARL86 20-29 years, male 183.8
GTEX-1IY9M-2726-SM-CMKG5 60-69 years, male 183.5
GTEX-1MJK3-1126-SM-E9J3F 20-29 years, male 183.4
GTEX-1MCYP-0126-SM-E6CIS 20-29 years, female 183.3
GTEX-1H1ZS-0126-SM-9YFKQ 70-79 years, male 182.9
GTEX-1B8KE-1226-SM-73KWK 50-59 years, male 182.3
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 181.3
GTEX-1J8Q3-1326-SM-CMKI1 60-69 years, male 181.1
GTEX-117XS-1926-SM-5GICO 60-69 years, male 180.6
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 179.6
GTEX-1RAZS-1226-SM-E8VMT 50-59 years, male 179.1
GTEX-1GMR2-1926-SM-9MQLZ 50-59 years, male 179.0
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 178.0
GTEX-17HHY-0926-SM-793C1 50-59 years, male 177.8
GTEX-1I1GV-2426-SM-CGQFM 60-69 years, male 177.8
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 177.5
GTEX-1HBPN-2326-SM-9WPPU 50-59 years, male 175.7
GTEX-1S82U-1126-SM-E9U6I 30-39 years, female 175.6
GTEX-1I6K7-1026-SM-A9SLK 40-49 years, male 174.5
GTEX-1C6WA-2426-SM-7SB86 60-69 years, male 174.2
GTEX-1C475-1226-SM-7SB72 40-49 years, female 174.0
GTEX-18465-2026-SM-718AP 50-59 years, male 173.8
GTEX-ZAK1-1326-SM-EVYAS 50-59 years, female 173.7
GTEX-14DAR-1326-SM-7DUEG 50-59 years, male 172.6
GTEX-1F6I4-2526-SM-7SB8F 60-69 years, male 172.4
GTEX-1B8L1-2426-SM-9WYTE 60-69 years, male 171.4
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 170.3
GTEX-1EWIQ-1726-SM-7SB7T 70-79 years, female 169.4
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 169.2
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 167.9
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 167.4
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 166.9
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 165.6
GTEX-1EN7A-1426-SM-7PBY4 40-49 years, male 152.7
GTEX-18A7B-2626-SM-7LG55 70-79 years, male 149.5
GTEX-1B97J-0426-SM-79OLQ 50-59 years, female 145.5
Show allShow less

BREAST - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

18.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Breast
Scaled Tags Per Million: 18.5
FF:10080-102A8 77 years, female 18.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org