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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:268.4 nTPM
GTEx:268.4 nTPM
FANTOM5:3.6 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051075Antibody CAB075755Antibody CAB075756
Squamous epithelial cells HighMediumMedium




VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

268.4
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 268.4
Samples: 156

Max nTPM: 521.9
Min nTPM: 171.0
Std nTPM: 54.6
Median nTPM: 260.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 521.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 455.3
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 393.5
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 389.8
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 385.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 373.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 371.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 365.9
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 364.2
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 363.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 362.6
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 358.5
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 356.7
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 348.0
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 344.3
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 332.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 330.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 325.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 324.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 324.8
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 323.5
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 322.3
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 321.9
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 321.7
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 321.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 313.6
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 313.3
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 310.3
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 309.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 309.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 309.0
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 308.8
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 305.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 305.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 302.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 302.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 301.5
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 301.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 299.5
GTEX-14PKU-1326-SM-6871B 40-49 years, female 299.2
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 297.4
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 293.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 293.3
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 292.9
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 288.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 287.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 287.9
GTEX-16NPV-2526-SM-6M483 50-59 years, female 287.7
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 287.5
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 287.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 286.1
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 286.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 285.1
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 284.7
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 283.9
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 283.8
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 283.0
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 282.9
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 282.2
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 281.3
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 279.0
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 279.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 278.0
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 276.8
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 275.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 275.1
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 274.5
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 272.1
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 270.3
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 268.0
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 267.9
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 266.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 264.8
GTEX-11I78-2026-SM-5987C 50-59 years, female 264.1
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 263.6
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 263.2
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 261.4
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 260.8
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 259.7
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 259.0
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 258.0
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 257.8
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 255.8
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 255.7
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 255.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 254.3
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 252.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 252.5
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 251.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 250.8
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 250.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 250.2
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 249.7
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 248.8
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 248.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 247.3
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 245.3
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 243.0
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 242.5
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 241.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 241.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 240.5
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 238.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 237.2
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 236.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 236.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 236.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 233.6
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 233.0
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 233.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 232.1
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 231.0
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 230.8
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 230.7
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 230.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 230.6
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 230.4
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 230.4
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 230.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 229.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 229.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 228.7
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 226.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 225.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 225.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 224.4
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 221.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 220.5
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 219.8
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 218.6
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 217.6
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 216.3
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 215.0
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 214.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 212.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 210.4
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 209.6
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 209.5
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 208.4
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 208.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 208.1
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 207.8
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 204.2
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 204.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 202.1
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 201.8
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 200.1
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 199.5
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 199.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 189.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 188.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 184.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 183.5
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 183.2
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 172.1
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 171.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 3.6
FF:10204-103F6 68 years, female 3.6

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