PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:1169.5 nTPM
FANTOM5:1249.2 Scaled Tags Per Million
Pig:751.5 nTPM
Mouse:44.4 nTPM
Allen mouse:13.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1169.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 970.5
2301 Female, age 85, both hemispheres 1116.1
2188 Female, age 91, both hemispheres 989.4
2090 Male, age 80, both hemispheres 975.9
1984 Male, age 76, both hemispheres 800.6
Area postrema
nTPM: 937.6
2799 Male, age 61, both hemispheres 1164.4
2306 Male, age 80, both hemispheres 958.6
2054 Male, age 76, both hemispheres 689.8
Dorsal cochlear nucleus
nTPM: 898.7
2058 Male, age 76, both hemispheres 942.0
2802 Male, age 74, right hemisphere 936.3
2187 Female, age 91, both hemispheres 923.1
2370 Male, age 61, both hemispheres 878.5
2378 Male, age 80, both hemispheres 813.8
Dorsal medullary reticular nucleus
nTPM: 896.1
2040 Female, age 85, both hemispheres 1105.7
2373 Male, age 61, both hemispheres 802.4
2088 Male, age 76, both hemispheres 780.0
Dorsal motor vagal complex
nTPM: 787.1
2000 Male, age 74, unknown 925.0
2133 Female, age 91, both hemispheres 846.2
2185 Male, age 76, both hemispheres 821.5
2844 Male, age 55, unknown 821.4
2797 Male, age 61, both hemispheres 809.5
2643 Male, age 74, both hemispheres 759.0
2813 Female, age 72, unknown 705.9
2807 Female, age 85, both hemispheres 608.3
Dorsal tegmental nucleus
nTPM: 895.4
2083 Male, age 80, both hemispheres 1024.6
2326 Male, age 74, both hemispheres 932.9
2358 Male, age 61, both hemispheres 834.5
1936 Male, age 76, left hemisphere 789.6
Dorsolateral tegmental area
nTPM: 847.4
2751 Female, age 85, both hemispheres 1013.2
2654 Male, age 80, both hemispheres 936.2
2337 Male, age 61, both hemispheres 774.7
2360 Male, age 74, both hemispheres 756.6
2141 Male, age 76, both hemispheres 756.4
Gigantocellular reticular nuclei, medullary
nTPM: 942.5
2462 Male, age 74, both hemispheres 1018.8
1876 Female, age 85, both hemispheres 1005.4
2314 Male, age 61, both hemispheres 984.5
2387 Female, age 91, both hemispheres 940.0
2310 Male, age 80, both hemispheres 902.0
2022 Male, age 76, right hemisphere 804.4
Gigantocellular reticular nuclei, pars
nTPM: 944.5
2168 Male, age 76, both hemispheres 1090.8
2084 Female, age 85, both hemispheres 975.8
2336 Male, age 61, both hemispheres 931.5
2330 Male, age 80, both hemispheres 902.7
2706 Male, age 80, both hemispheres 821.5
Inferior olive
nTPM: 953.1
2563 Male, age 74, both hemispheres 1092.1
2085 Female, age 85, both hemispheres 1042.0
2178 Male, age 61, both hemispheres 920.9
2628 Female, age 91, both hemispheres 903.2
2379 Male, age 80, both hemispheres 807.1
Kolliker-Fuse nucleus
nTPM: 1003.8
2315 Male, age 76, right hemisphere 1036.4
2793 Female, age 91, left hemisphere 1022.7
2163 Male, age 80, both hemispheres 952.2
Lateral lemniscal nuclei
nTPM: 1043.4
2169 Male, age 76, both hemispheres 1122.5
2746 Female, age 85, left hemisphere 1094.8
2036 Male, age 80, both hemispheres 1041.3
2453 Male, age 74, right hemisphere 989.9
2320 Female, age 91, left hemisphere 968.2
Lateral medullary reticular nucleus
nTPM: 988.3
2305 Male, age 74, both hemispheres 1183.7
2852 Male, age 80, both hemispheres 1056.2
2044 Male, age 76, both hemispheres 1011.6
2190 Female, age 85, both hemispheres 942.4
2374 Male, age 61, both hemispheres 890.3
2804 Female, age 91, both hemispheres 845.5
Lateral parabrachial nucleus
nTPM: 1041.7
2792 Male, age 76, both hemispheres 1151.0
2139 Female, age 85, right hemisphere 1138.1
2013 Male, age 80, both hemispheres 1028.1
2790 Male, age 61, both hemispheres 849.5
Lateral vestibular nucleus
nTPM: 956.6
2311 Male, age 80, both hemispheres 985.2
2184 Male, age 76, both hemispheres 928.1
Locus coeruleus
nTPM: 853.8
2014 Male, age 55, unknown 1011.5
2317 Female, age 72, unknown 879.3
2123 Female, age 91, both hemispheres 869.1
2162 Male, age 80, both hemispheres 846.7
1980 Male, age 76, both hemispheres 837.3
2788 Male, age 74, unknown 775.1
2720 Male, age 74, both hemispheres 757.9
Medial olivary nucleus
nTPM: 1033.8
1962 Male, age 76, both hemispheres 1162.8
2138 Female, age 91, both hemispheres 1037.2
1943 Male, age 61, both hemispheres 995.0
2851 Male, age 80, both hemispheres 940.2
Medial parabrachial nucleus
nTPM: 935.8
2170 Female, age 91, both hemispheres 980.8
2463 Female, age 85, right hemisphere 976.3
2156 Male, age 61, both hemispheres 955.4
2854 Male, age 80, both hemispheres 894.2
2786 Male, age 76, both hemispheres 872.1
Medial periolivary nuclei
nTPM: 1022.8
2063 Male, age 76, both hemispheres 1211.2
2791 Male, age 74, right hemisphere 1121.4
2171 Female, age 85, both hemispheres 1018.8
2081 Male, age 80, both hemispheres 931.0
2458 Female, age 91, both hemispheres 831.7
Medial vestibular nucleus
nTPM: 944.8
2801 Male, age 74, both hemispheres 1053.7
2093 Male, age 80, both hemispheres 977.5
2803 Female, age 91, both hemispheres 945.2
2624 Male, age 61, both hemispheres 944.8
2743 Female, age 85, both hemispheres 884.2
2134 Male, age 76, both hemispheres 863.6
Motor facial nucleus
nTPM: 1026.6
2365 Male, age 74, right hemisphere 1240.4
2062 Male, age 76, both hemispheres 1209.2
2126 Male, age 61, both hemispheres 965.9
2697 Female, age 85, both hemispheres 947.3
2327 Male, age 80, both hemispheres 944.2
2795 Female, age 91, both hemispheres 852.5
Motor hypoglossal nucleus
nTPM: 908.8
2125 Female, age 91, both hemispheres 1026.2
2132 Female, age 85, both hemispheres 1025.9
2182 Male, age 80, both hemispheres 955.9
2461 Male, age 61, both hemispheres 860.1
2277 Male, age 76, both hemispheres 676.1
Motor trigeminal nucleus
nTPM: 942.3
2560 Male, age 74, both hemispheres 1036.5
2079 Male, age 80, both hemispheres 1009.2
2335 Male, age 61, both hemispheres 931.5
2309 Male, age 76, both hemispheres 899.1
2321 Female, age 91, both hemispheres 835.3
Nuclei of the trapezoid body
nTPM: 1041.5
1983 Male, age 76, both hemispheres 1164.6
2159 Male, age 61, both hemispheres 1164.3
2735 Female, age 85, both hemispheres 1055.0
2166 Male, age 80, both hemispheres 941.0
2368 Female, age 91, both hemispheres 882.5
Nucleus ambiguus
nTPM: 1130.5
2071 Male, age 76, both hemispheres 1194.2
2096 Female, age 85, both hemispheres 1066.9
Nucleus cuneatus
nTPM: 870.7
2100 Male, age 76, both hemispheres 1026.1
2808 Female, age 85, both hemispheres 978.6
2564 Male, age 74, both hemispheres 970.4
2380 Male, age 80, both hemispheres 899.4
2131 Male, age 76, both hemispheres 867.4
2381 Male, age 80, both hemispheres 842.5
2376 Male, age 61, both hemispheres 813.3
2562 Male, age 61, both hemispheres 789.7
2805 Female, age 91, both hemispheres 648.8
Nucleus gracilis
nTPM: 957.0
2627 Male, age 74, both hemispheres 1044.6
2382 Male, age 80, both hemispheres 985.8
2299 Female, age 85, both hemispheres 840.7
Nucleus raphe magnus
nTPM: 1061.1
2160 Male, age 61, both hemispheres 1299.1
2455 Male, age 74, both hemispheres 1116.8
2172 Female, age 85, both hemispheres 1039.5
2051 Male, age 76, both hemispheres 1006.3
2328 Male, age 80, both hemispheres 983.0
2459 Female, age 91, both hemispheres 922.1
Nucleus raphe obscurus
nTPM: 1052.8
2845 Female, age 85, midline 1159.3
2142 Male, age 76, midline 1073.7
2800 Male, age 61, midline 925.4
Nucleus raphe pallidus
nTPM: 1107.8
1924 Male, age 61, midline 1198.4
2145 Male, age 76, midline 1124.6
2183 Male, age 80, midline 1000.5
Nucleus tractus solitarii
nTPM: 642.0
2656 Male, age 76, both hemispheres 703.6
2144 Female, age 91, right hemisphere 625.7
2307 Male, age 80, both hemispheres 621.1
2191 Female, age 85, both hemispheres 617.4
Paramedian reticular nucleus
nTPM: 963.5
2057 Male, age 80, both hemispheres 1054.5
2050 Female, age 85, both hemispheres 1049.1
2313 Male, age 61, both hemispheres 942.5
2052 Male, age 76, both hemispheres 807.9
Parvicellular reticular nuclei
nTPM: 956.6
2119 Male, age 80, both hemispheres 1002.5
2095 Male, age 76, both hemispheres 981.7
2558 Male, age 74, both hemispheres 885.7
Parvicellular reticular nuclei, medullary
nTPM: 930.6
2189 Female, age 91, both hemispheres 951.3
2091 Female, age 85, both hemispheres 943.5
2181 Male, age 80, left hemisphere 896.8
Pedunculopontine tegmental nucleus
nTPM: 847.4
2334 Male, age 80, both hemispheres 880.9
2338 Male, age 61, both hemispheres 836.9
1921 Female, age 85, both hemispheres 824.3
Peritrigeminal nucleus
nTPM: 1060.8
2067 Female, age 85, both hemispheres 1113.9
2136 Male, age 76, both hemispheres 1061.0
2179 Male, age 61, both hemispheres 1007.6
Pontine nuclei
nTPM: 1169.5
1863 Male, age 55, unknown 1298.8
2454 Male, age 74, left hemisphere 1275.3
2787 Female, age 85, both hemispheres 1257.1
2109 Female, age 72, unknown 1244.2
2727 Male, age 61, right hemisphere 1207.9
1968 Male, age 76, left hemisphere 1185.9
2319 Female, age 91, both hemispheres 974.3
2115 Male, age 80, left hemisphere 912.7
Pontine raphe nucleus
nTPM: 914.7
2122 Female, age 85, midline 1021.1
2853 Male, age 76, midline 808.4
Posteroventral cochlear nucleus
nTPM: 950.8
2135 Female, age 91, both hemispheres 1011.9
2070 Male, age 76, both hemispheres 972.8
2752 Female, age 85, both hemispheres 953.6
2341 Male, age 80, both hemispheres 910.9
2371 Male, age 61, both hemispheres 904.9
Prepositus hypoglossal nucleus
nTPM: 938.1
2855 Female, age 85, right hemisphere 1024.9
2086 Male, age 80, both hemispheres 851.3
Principal sensory trigeminal nucleus
nTPM: 1007.3
2158 Male, age 61, both hemispheres 1186.4
2008 Male, age 80, left hemisphere 975.7
2367 Female, age 91, left hemisphere 952.1
2324 Male, age 76, both hemispheres 915.2
Reticular pontine nucleus, caudal
nTPM: 1037.2
2092 Male, age 76, both hemispheres 1179.3
2559 Male, age 74, both hemispheres 1023.8
2332 Male, age 80, right hemisphere 982.8
2457 Female, age 91, both hemispheres 962.9
Reticular pontine nucleus, oral
nTPM: 1003.3
2361 Male, age 74, both hemispheres 1175.3
2012 Female, age 85, both hemispheres 1046.5
2366 Female, age 91, both hemispheres 1015.0
1939 Male, age 80, both hemispheres 908.5
2167 Male, age 76, both hemispheres 871.2
Reticulotegmental nucleus
nTPM: 897.5
2452 Male, age 74, both hemispheres 925.0
2325 Male, age 76, both hemispheres 906.3
2333 Male, age 80, both hemispheres 888.8
2322 Female, age 91, both hemispheres 870.0
Spinal trigeminal nucleus, caudal
nTPM: 918.5
2447 Male, age 76, both hemispheres 1003.6
2390 Female, age 91, both hemispheres 962.1
2312 Male, age 61, both hemispheres 924.1
2308 Male, age 80, both hemispheres 892.6
2642 Male, age 74, both hemispheres 810.2
Spinal trigeminal nucleus, interpolar
nTPM: 942.9
2066 Male, age 76, right hemisphere 1063.1
2625 Male, age 61, both hemispheres 1012.4
2033 Male, age 80, both hemispheres 893.7
2389 Female, age 91, both hemispheres 887.3
2386 Female, age 85, both hemispheres 858.2
Spinal trigeminal nucleus, oral
nTPM: 869.5
2164 Male, age 80, both hemispheres 895.7
1978 Male, age 76, both hemispheres 876.3
2737 Female, age 85, both hemispheres 836.6
Spinal vestibular nucleus
nTPM: 939.3
2748 Male, age 76, both hemispheres 1035.3
2186 Female, age 91, both hemispheres 962.0
2806 Female, age 85, both hemispheres 951.8
2780 Male, age 80, both hemispheres 933.2
2384 Male, age 74, both hemispheres 917.3
2796 Male, age 61, both hemispheres 836.0
Subcoeruleus area
nTPM: 899.5
2369 Female, age 85, left hemisphere 1030.6
2089 Male, age 76, left hemisphere 992.1
1958 Male, age 80, both hemispheres 920.7
2323 Female, age 91, left hemisphere 798.2
2451 Male, age 74, both hemispheres 756.1
Superior olive
nTPM: 1041.4
2364 Male, age 74, right hemisphere 1203.2
2020 Male, age 76, both hemispheres 1127.4
1875 Female, age 85, both hemispheres 1075.4
2329 Male, age 80, right hemisphere 977.6
2561 Female, age 91, both hemispheres 823.4
Superior vestibular nucleus
nTPM: 954.9
2061 Male, age 76, both hemispheres 1034.1
2015 Male, age 80, both hemispheres 970.4
2383 Male, age 74, both hemispheres 860.3
Ventral medullary reticular nucleus
nTPM: 900.0
2060 Male, age 76, both hemispheres 977.7
2372 Male, age 61, both hemispheres 822.3
Ventral periolivary nuclei
nTPM: 1027.2
2023 Male, age 76, both hemispheres 1185.8
2130 Female, age 85, both hemispheres 1138.0
2165 Male, age 80, both hemispheres 1040.4
2794 Female, age 91, left hemisphere 744.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 947.8
1986 Male, age 76, both hemispheres 1017.9
2741 Female, age 85, both hemispheres 960.0
2118 Male, age 80, both hemispheres 946.4
2180 Male, age 61, both hemispheres 927.6
2302 Female, age 91, both hemispheres 887.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 958.4
1959 Male, age 76, both hemispheres 1067.9
2449 Male, age 74, both hemispheres 1049.3
2840 Female, age 85, both hemispheres 959.8
2161 Male, age 80, both hemispheres 915.9
2456 Female, age 91, both hemispheres 880.8
2359 Male, age 61, both hemispheres 876.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1249.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1249.2
FF:10182-103D2 60 years, female 1526.1
FF:10165-103B3 76 years, female 972.3
Medulla oblongata
Scaled Tags Per Million: 874.7
FF:10174-103C3 60 years, female 952.6
FF:10038-101F2 18-64 years, mixed 868.1
FF:10155-103A2 76 years, female 803.3
Pons
Scaled Tags Per Million: 872.2
FF:10033-101E6 18-54 years, mixed 872.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 751.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 751.5
Samples: 4

Max nTPM: 826.0
Min nTPM: 665.1
Sample A Female 763.1
Sample B Female 665.1
Sample C Male 826.0
Sample D Male 751.8
Pons
nTPM: 709.5
Samples: 4

Max nTPM: 799.9
Min nTPM: 614.9
Sample A Female 732.7
Sample B Female 614.9
Sample C Male 690.6
Sample D Male 799.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 44.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 44.4
Samples: 4

Max nTPM: 46.3
Min nTPM: 43.2
Sample A Male 46.3
Sample B Male 43.2
Sample C Female 43.6
Sample D Female 44.5

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 13.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.1
74510104 Antisense, RP_060208_01_A08, Mouse strain C57BL/6J (56 days, male) 13.1
Pons
Expression energy: 12.1
74510104 Antisense, RP_060208_01_A08, Mouse strain C57BL/6J (56 days, male) 12.1

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