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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:51.6 nTPM
HPA Brain:151.7 nTPM
GTEx:51.6 nTPM
FANTOM5:392.9 Scaled Tags Per Million
Pig:192.3 nTPM
Mouse:210.4 nTPM
Allen mouse:14.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA069176
Glial cells Not detected
Neuronal cells Not detected


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

151.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 114.7
1781 Male, age 74, unknown 141.7
2288 Male, age 75, left hemisphere 130.5
2290 Female, age 72, unknown 124.9
1857 Female, age 85, left hemisphere 124.4
2846 Female, age 79, unknown 115.4
1854 Male, age 80, left hemisphere 113.1
2289 Male, age 61, right hemisphere 104.4
2481 Female, age 94, left hemisphere 62.8
Globus pallidus, externus
nTPM: 50.9
2772 Female, age 79, unknown 72.6
2567 Female, age 72, unknown 60.2
2646 Male, age 61, right hemisphere 49.4
2395 Male, age 75, both hemispheres 40.5
1996 Male, age 80, right hemisphere 31.5
Globus pallidus, internus
nTPM: 40.4
1818 Male, age 74, unknown 65.5
2566 Female, age 72, unknown 55.7
2483 Female, age 94, right hemisphere 47.2
2037 Male, age 80, right hemisphere 41.0
2111 Female, age 85, right hemisphere 30.7
2287 Male, age 75, right hemisphere 23.4
2778 Female, age 91, both hemispheres 19.5
Nucleus accumbens
nTPM: 110.9
1856 Female, age 91, right hemisphere 170.8
2824 Male, age 61, right hemisphere 141.2
1783 Male, age 74, unknown 137.5
2286 Male, age 75, left hemisphere 115.2
1806 Female, age 85, left hemisphere 109.5
2698 Female, age 72, unknown 98.9
2732 Male, age 80, right hemisphere 59.7
2391 Female, age 94, left hemisphere 53.9
Nucleus basalis of Meynert
nTPM: 96.1
2484 Female, age 94, left hemisphere 112.8
2393 Male, age 80, right hemisphere 110.5
2821 Male, age 75, both hemispheres 108.7
2569 Male, age 61, both hemispheres 52.6
Nucleus of the diagonal band
nTPM: 151.6
2029 Male, age 61, right hemisphere 183.9
2775 Male, age 80, right hemisphere 164.9
1812 Female, age 91, both hemispheres 162.3
2195 Female, age 85, both hemispheres 157.2
1979 Male, age 74, unknown 89.8
Putamen
nTPM: 117.4
1838 Male, age 80, right hemisphere 152.8
2647 Male, age 75, left hemisphere 138.6
1937 Female, age 91, right hemisphere 127.7
1829 Male, age 74, unknown 120.6
2466 Female, age 79, unknown 104.8
2489 Female, age 72, unknown 104.3
2482 Female, age 94, left hemisphere 73.4
Septal nuclei
nTPM: 125.2
2629 Female, age 94, right hemisphere 167.0
1960 Male, age 74, unknown 156.1
2031 Female, age 72, unknown 149.8
2009 Female, age 91, both hemispheres 134.3
2059 Female, age 85, both hemispheres 118.6
2394 Male, age 61, left hemisphere 93.7
2199 Male, age 80, right hemisphere 57.0
Stria terminalis, bed nucleus
nTPM: 151.7
1974 Female, age 91, both hemispheres 180.6
2486 Female, age 94, both hemispheres 166.7
2201 Male, age 74, unknown 108.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 40.8
Samples: 246

Max nTPM: 111.9
Min nTPM: 5.8
Std nTPM: 18.9
Median nTPM: 39.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 111.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 82.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 79.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 79.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 78.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 77.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 75.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 74.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 73.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 73.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 73.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 72.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 71.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 71.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 70.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 70.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 69.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 68.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 68.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 67.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 67.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 66.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 65.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 65.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 65.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 64.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 64.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 64.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 64.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 64.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 63.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 63.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 63.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 63.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 63.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 62.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 62.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 61.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 61.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 61.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 60.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 60.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 60.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 59.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 59.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 59.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 58.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 58.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 58.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 58.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 57.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 57.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 57.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 57.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 57.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 56.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 56.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 55.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 55.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 55.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 55.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 55.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 55.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 54.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 53.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 53.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 53.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 53.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 53.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 53.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 53.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 52.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 52.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 51.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 51.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 51.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 51.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 51.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 51.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 51.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 51.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 49.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 49.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 49.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 49.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 49.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 48.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 48.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 48.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 48.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 48.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 47.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 47.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 46.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 46.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 46.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 45.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 45.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 45.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 45.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 45.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 45.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 44.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 44.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 44.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 44.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 43.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 43.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 43.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 42.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 41.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 41.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 41.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 41.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 40.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 40.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 40.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 40.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 40.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 40.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 40.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 39.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 39.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 39.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 39.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 39.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 39.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 39.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 38.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 38.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 38.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 37.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 37.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 37.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 37.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 37.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 37.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 37.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 37.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 36.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 36.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 36.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 36.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 36.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 35.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 35.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 35.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 35.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 35.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 35.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 34.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 34.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 34.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 34.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 34.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 33.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 33.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 33.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 33.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 32.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 32.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 32.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 32.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 32.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 32.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 31.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 31.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 31.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 31.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 31.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 30.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 30.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 30.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 28.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 28.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 28.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 28.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 28.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 28.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 28.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 28.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 27.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 26.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 26.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 26.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 25.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 25.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 25.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 25.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 24.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 24.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 22.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 22.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 22.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 22.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 22.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 21.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 20.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 20.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 20.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 20.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 20.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 20.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 20.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 19.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 19.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 19.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 18.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 18.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 18.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 17.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 17.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 17.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 16.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 16.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 16.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 15.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 15.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 15.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 15.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 15.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 15.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 15.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 14.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 14.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 14.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 14.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 14.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 14.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 13.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 13.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 12.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 12.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 12.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 11.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 11.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 10.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 10.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 9.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 8.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 8.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 8.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 8.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 7.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 6.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 5.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 51.6
Samples: 246

Max nTPM: 103.1
Min nTPM: 2.3
Std nTPM: 21.6
Median nTPM: 52.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 103.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 95.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 92.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 90.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 88.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 85.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 85.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 84.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 84.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 83.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 83.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 82.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 82.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 82.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 82.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 81.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 81.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 81.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 80.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 79.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 79.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 78.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 78.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 77.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 77.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 77.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 77.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 77.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 76.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 76.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 76.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 76.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 76.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 76.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 75.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 75.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 75.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 74.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 74.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 74.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 73.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 73.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 72.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 72.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 72.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 72.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 72.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 72.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 71.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 71.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 71.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 71.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 70.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 70.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 70.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 70.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 70.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 69.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 69.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 69.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 68.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 68.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 68.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 68.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 67.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 67.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 67.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 67.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 67.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 67.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 67.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 66.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 66.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 66.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 66.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 65.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 65.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 65.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 65.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 64.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 64.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 64.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 64.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 64.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 64.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 63.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 63.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 63.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 62.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 62.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 62.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 61.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 61.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 61.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 61.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 61.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 61.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 61.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 60.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 60.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 60.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 60.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 60.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 60.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 59.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 59.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 59.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 58.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 58.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 58.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 58.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 57.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 56.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 56.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 55.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 55.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 55.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 54.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 54.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 54.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 53.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 53.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 52.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 52.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 52.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 52.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 52.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 52.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 52.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 52.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 51.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 50.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 50.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 49.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 49.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 49.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 49.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 49.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 48.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 48.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 48.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 48.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 48.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 48.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 47.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 47.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 47.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 47.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 47.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 47.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 47.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 46.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 46.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 45.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 44.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 44.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 44.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 43.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 43.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 43.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 42.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 42.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 41.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 41.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 41.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 41.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 41.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 41.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 40.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 40.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 40.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 40.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 40.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 39.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 38.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 38.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 38.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 38.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 38.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 37.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 37.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 37.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 36.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 36.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 36.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 35.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 35.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 35.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 35.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 35.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 35.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 34.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 34.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 34.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 33.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 33.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 32.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 30.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 29.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 29.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 28.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 28.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 28.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 28.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 28.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 28.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 26.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 25.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 25.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 24.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 24.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 23.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 23.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 22.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 22.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 20.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 20.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 20.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 20.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 20.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 20.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 20.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 20.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 18.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 18.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 18.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 17.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 15.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 15.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 15.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 15.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 15.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 14.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 14.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 13.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 12.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 10.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 10.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 10.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 9.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 8.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 8.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 7.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 6.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 5.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 2.3
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Brain - Putamen (basal ganglia)
Average nTPM: 41.6
Samples: 205

Max nTPM: 90.8
Min nTPM: 3.9
Std nTPM: 19.8
Median nTPM: 42.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 90.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 89.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 83.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 79.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 78.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 78.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 78.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 77.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 73.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 73.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 73.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 72.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 71.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 70.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 70.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 70.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 69.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 68.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 67.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 67.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 66.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 66.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 66.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 65.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 65.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 64.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 64.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 64.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 64.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 63.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 63.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 63.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 62.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 61.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 60.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 60.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 60.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 60.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 60.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 59.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 59.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 59.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 59.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 59.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 58.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 58.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 57.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 57.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 56.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 56.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 56.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 55.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 55.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 55.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 54.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 54.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 54.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 54.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 54.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 54.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 54.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 54.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 53.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 53.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 53.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 53.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 53.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 53.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 52.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 52.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 51.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 51.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 50.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 50.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 50.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 49.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 48.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 48.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 48.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 48.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 48.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 48.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 48.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 48.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 47.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 47.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 46.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 46.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 45.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 44.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 44.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 44.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 43.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 43.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 43.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 43.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 43.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 43.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 43.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 43.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 42.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 42.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 42.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 42.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 42.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 41.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 41.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 40.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 40.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 40.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 40.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 40.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 39.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 39.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 39.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 39.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 38.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 38.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 38.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 37.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 37.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 37.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 36.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 36.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 36.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 36.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 36.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 36.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 35.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 34.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 34.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 34.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 34.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 34.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 33.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 33.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 32.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 32.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 31.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 31.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 30.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 30.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 30.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 29.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 29.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 29.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 28.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 27.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 27.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 27.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 27.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 26.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 26.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 26.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 26.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 24.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 23.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 23.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 23.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 23.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 23.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 23.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 22.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 20.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 20.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 20.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 19.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 19.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 19.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 19.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 19.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 18.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 18.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 18.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 18.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 17.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 17.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 16.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 16.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 14.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 14.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 14.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 13.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 13.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 13.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 13.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 12.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 12.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 12.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 12.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 11.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 11.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 10.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 9.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 9.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 8.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 8.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 8.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 7.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 7.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 7.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 6.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 6.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 4.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 3.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

392.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 176.1
FF:10164-103B2 76 years, female 176.1
Nucleus accumbens
Scaled Tags Per Million: 392.9
FF:10037-101F1 23-56 years, mixed 392.9
Putamen
Scaled Tags Per Million: 346.9
FF:10176-103C5 60 years, female 346.9
Globus pallidus
Scaled Tags Per Million: 69.6
FF:10175-103C4 60 years, female 87.8
FF:10161-103A8 76 years, female 51.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

192.3
Pig sample Sample description nTPM
Caudate
nTPM: 192.3
Samples: 4

Max nTPM: 238.4
Min nTPM: 156.9
Sample A Female 156.9
Sample B Female 198.8
Sample C Male 238.4
Sample D Male 175.1
Putamen
nTPM: 162.2
Samples: 4

Max nTPM: 212.1
Min nTPM: 90.1
Sample A Female 90.1
Sample B Female 155.9
Sample C Male 212.1
Sample D Male 190.5
Septum
nTPM: 111.1
Samples: 4

Max nTPM: 132.0
Min nTPM: 86.8
Sample A Female 132.0
Sample B Female 120.9
Sample C Male 104.6
Sample D Male 86.8
Ventral pallidum
nTPM: 153.2
Samples: 4

Max nTPM: 168.3
Min nTPM: 146.0
Sample A Female 168.3
Sample B Female 146.0
Sample C Male 150.8
Sample D Male 147.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

210.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 198.8
Samples: 4

Max nTPM: 215.0
Min nTPM: 185.9
Sample A Male 186.5
Sample B Male 185.9
Sample C Female 215.0
Sample D Female 207.6
Septum
nTPM: 171.4
Samples: 4

Max nTPM: 185.6
Min nTPM: 159.7
Sample A Male 185.6
Sample B Male 171.0
Sample C Female 159.7
Sample D Female 169.2
Ventral forebrain
nTPM: 210.4
Samples: 4

Max nTPM: 223.7
Min nTPM: 196.8
Sample A Male 198.7
Sample B Male 223.7
Sample C Female 196.8
Sample D Female 222.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 14.1
100144175 Antisense, RP_110407_03_C11, Mouse strain C57BL/6J (56 days, male) 14.1
Pallidum
Expression energy: 12.7
100144175 Antisense, RP_110407_03_C11, Mouse strain C57BL/6J (56 days, male) 12.7

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