PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		109.320
Mouse brain, Intensity
Ponsi 		96.472
RNA expressioni
HPA Brain:259.6 nTPM
FANTOM5:495.4 Scaled Tags Per Million
Pig:133.1 nTPM
Mouse:194.1 nTPM
Allen mouse:13.6 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody CAB079008
Medulla oblongata mean intensity 109.320
intensityi
FRONT BACK
Nucleus of the solitary tract 75.913
Raphe magnus nucleus 82.773
Cochlear nucleus 88.153
Lateral paragigantocellular nucleus 84.100
Raphe pallidus nucleus 87.053
Facial nucleus 74.922
Hypoglossal nucleus 49.511
Ambiguus nucleus 97.075
External cuneate nucleus 100.309
Inferior olivary nucleus 89.247
Raphe obscures nucleus 81.646
Dorsal motor nucleus of vagus 104.829
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 81.451
Parabrachial nucleus 93.543
Principle sensory trigeminal nucleus 93.570
Locus coeruleus 83.026
Pontine nucleus 75.945
Vestibular nucleus 73.638
Pontine reticular nucleus, oral 69.074
Lateral lemniscus 80.973
Superior paraolivary nucleus 83.795

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 259.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 106.2
2301 Female, age 85, both hemispheres 132.6
1984 Male, age 76, both hemispheres 123.9
2188 Female, age 91, both hemispheres 92.8
2090 Male, age 80, both hemispheres 75.3
Area postrema
nTPM: 43.9
2054 Male, age 76, both hemispheres 84.3
2306 Male, age 80, both hemispheres 32.0
2799 Male, age 61, both hemispheres 15.5
Dorsal cochlear nucleus
nTPM: 110.5
2370 Male, age 61, both hemispheres 128.9
2058 Male, age 76, both hemispheres 126.4
2802 Male, age 74, right hemisphere 109.2
2187 Female, age 91, both hemispheres 97.1
2378 Male, age 80, both hemispheres 90.7
Dorsal medullary reticular nucleus
nTPM: 136.9
2040 Female, age 85, both hemispheres 159.7
2373 Male, age 61, both hemispheres 133.6
2088 Male, age 76, both hemispheres 117.4
Dorsal motor vagal complex
nTPM: 101.2
2133 Female, age 91, both hemispheres 174.8
2000 Male, age 74, unknown 115.1
2813 Female, age 72, unknown 96.4
2844 Male, age 55, unknown 92.7
2797 Male, age 61, both hemispheres 87.5
2807 Female, age 85, both hemispheres 87.1
2643 Male, age 74, both hemispheres 80.2
2185 Male, age 76, both hemispheres 76.2
Dorsal tegmental nucleus
nTPM: 101.1
2083 Male, age 80, both hemispheres 127.4
2358 Male, age 61, both hemispheres 101.2
1936 Male, age 76, left hemisphere 99.9
2326 Male, age 74, both hemispheres 75.8
Dorsolateral tegmental area
nTPM: 88.3
2141 Male, age 76, both hemispheres 124.8
2654 Male, age 80, both hemispheres 121.7
2751 Female, age 85, both hemispheres 85.6
2360 Male, age 74, both hemispheres 61.6
2337 Male, age 61, both hemispheres 48.0
Gigantocellular reticular nuclei, medullary
nTPM: 164.0
2462 Male, age 74, both hemispheres 319.6
2310 Male, age 80, both hemispheres 180.7
2022 Male, age 76, right hemisphere 154.9
2387 Female, age 91, both hemispheres 146.5
1876 Female, age 85, both hemispheres 126.2
2314 Male, age 61, both hemispheres 55.9
Gigantocellular reticular nuclei, pars
nTPM: 165.6
2168 Male, age 76, both hemispheres 234.9
2330 Male, age 80, both hemispheres 153.5
2084 Female, age 85, both hemispheres 152.2
2706 Male, age 80, both hemispheres 144.6
2336 Male, age 61, both hemispheres 142.7
Inferior olive
nTPM: 53.0
2628 Female, age 91, both hemispheres 113.9
2085 Female, age 85, both hemispheres 60.9
2178 Male, age 61, both hemispheres 32.9
2379 Male, age 80, both hemispheres 29.4
2563 Male, age 74, both hemispheres 27.9
Kolliker-Fuse nucleus
nTPM: 131.5
2163 Male, age 80, both hemispheres 162.7
2793 Female, age 91, left hemisphere 159.2
2315 Male, age 76, right hemisphere 72.5
Lateral lemniscal nuclei
nTPM: 229.3
2453 Male, age 74, right hemisphere 282.9
2169 Male, age 76, both hemispheres 257.6
2036 Male, age 80, both hemispheres 237.0
2746 Female, age 85, left hemisphere 189.1
2320 Female, age 91, left hemisphere 180.0
Lateral medullary reticular nucleus
nTPM: 83.0
2044 Male, age 76, both hemispheres 158.0
2804 Female, age 91, both hemispheres 93.3
2190 Female, age 85, both hemispheres 84.0
2374 Male, age 61, both hemispheres 62.9
2852 Male, age 80, both hemispheres 59.9
2305 Male, age 74, both hemispheres 39.9
Lateral parabrachial nucleus
nTPM: 136.4
2139 Female, age 85, right hemisphere 225.1
2790 Male, age 61, both hemispheres 156.4
2013 Male, age 80, both hemispheres 116.9
2792 Male, age 76, both hemispheres 47.0
Lateral vestibular nucleus
nTPM: 135.4
2184 Male, age 76, both hemispheres 160.8
2311 Male, age 80, both hemispheres 110.1
Locus coeruleus
nTPM: 126.9
2123 Female, age 91, both hemispheres 170.2
2720 Male, age 74, both hemispheres 139.0
2162 Male, age 80, both hemispheres 132.6
1980 Male, age 76, both hemispheres 118.7
2317 Female, age 72, unknown 118.5
2788 Male, age 74, unknown 107.8
2014 Male, age 55, unknown 101.4
Medial olivary nucleus
nTPM: 41.8
2851 Male, age 80, both hemispheres 80.6
1962 Male, age 76, both hemispheres 40.7
2138 Female, age 91, both hemispheres 28.3
1943 Male, age 61, both hemispheres 17.5
Medial parabrachial nucleus
nTPM: 123.7
2156 Male, age 61, both hemispheres 168.5
2854 Male, age 80, both hemispheres 148.8
2786 Male, age 76, both hemispheres 132.8
2463 Female, age 85, right hemisphere 84.8
2170 Female, age 91, both hemispheres 83.5
Medial periolivary nuclei
nTPM: 198.4
2171 Female, age 85, both hemispheres 293.3
2063 Male, age 76, both hemispheres 235.8
2791 Male, age 74, right hemisphere 188.1
2458 Female, age 91, both hemispheres 161.9
2081 Male, age 80, both hemispheres 113.0
Medial vestibular nucleus
nTPM: 150.5
2624 Male, age 61, both hemispheres 179.5
2093 Male, age 80, both hemispheres 156.7
2134 Male, age 76, both hemispheres 154.7
2803 Female, age 91, both hemispheres 152.6
2743 Female, age 85, both hemispheres 139.8
2801 Male, age 74, both hemispheres 119.8
Motor facial nucleus
nTPM: 215.5
2327 Male, age 80, both hemispheres 251.4
2062 Male, age 76, both hemispheres 249.5
2795 Female, age 91, both hemispheres 231.6
2365 Male, age 74, right hemisphere 223.6
2697 Female, age 85, both hemispheres 202.1
2126 Male, age 61, both hemispheres 134.8
Motor hypoglossal nucleus
nTPM: 138.7
2461 Male, age 61, both hemispheres 173.7
2132 Female, age 85, both hemispheres 170.6
2125 Female, age 91, both hemispheres 157.3
2182 Male, age 80, both hemispheres 104.2
2277 Male, age 76, both hemispheres 87.6
Motor trigeminal nucleus
nTPM: 168.9
2560 Male, age 74, both hemispheres 219.7
2079 Male, age 80, both hemispheres 197.0
2335 Male, age 61, both hemispheres 163.3
2309 Male, age 76, both hemispheres 139.5
2321 Female, age 91, both hemispheres 125.1
Nuclei of the trapezoid body
nTPM: 242.3
2159 Male, age 61, both hemispheres 307.2
2735 Female, age 85, both hemispheres 286.9
1983 Male, age 76, both hemispheres 222.9
2368 Female, age 91, both hemispheres 220.6
2166 Male, age 80, both hemispheres 173.8
Nucleus ambiguus
nTPM: 137.0
2096 Female, age 85, both hemispheres 234.9
2071 Male, age 76, both hemispheres 39.1
Nucleus cuneatus
nTPM: 101.4
2131 Male, age 76, both hemispheres 160.2
2100 Male, age 76, both hemispheres 130.4
2562 Male, age 61, both hemispheres 130.4
2376 Male, age 61, both hemispheres 114.2
2564 Male, age 74, both hemispheres 103.2
2381 Male, age 80, both hemispheres 86.6
2805 Female, age 91, both hemispheres 83.9
2808 Female, age 85, both hemispheres 65.6
2380 Male, age 80, both hemispheres 38.4
Nucleus gracilis
nTPM: 49.5
2627 Male, age 74, both hemispheres 54.1
2299 Female, age 85, both hemispheres 52.6
2382 Male, age 80, both hemispheres 41.7
Nucleus raphe magnus
nTPM: 259.6
2160 Male, age 61, both hemispheres 381.7
2172 Female, age 85, both hemispheres 329.8
2455 Male, age 74, both hemispheres 268.7
2328 Male, age 80, both hemispheres 217.7
2459 Female, age 91, both hemispheres 187.6
2051 Male, age 76, both hemispheres 172.1
Nucleus raphe obscurus
nTPM: 59.4
2800 Male, age 61, midline 86.0
2845 Female, age 85, midline 75.2
2142 Male, age 76, midline 17.0
Nucleus raphe pallidus
nTPM: 68.8
2183 Male, age 80, midline 98.7
1924 Male, age 61, midline 67.9
2145 Male, age 76, midline 39.6
Nucleus tractus solitarii
nTPM: 102.3
2656 Male, age 76, both hemispheres 124.1
2307 Male, age 80, both hemispheres 103.2
2144 Female, age 91, right hemisphere 95.3
2191 Female, age 85, both hemispheres 86.7
Paramedian reticular nucleus
nTPM: 143.3
2050 Female, age 85, both hemispheres 191.5
2313 Male, age 61, both hemispheres 165.6
2057 Male, age 80, both hemispheres 136.9
2052 Male, age 76, both hemispheres 79.3
Parvicellular reticular nuclei
nTPM: 174.6
2558 Male, age 74, both hemispheres 298.6
2095 Male, age 76, both hemispheres 117.4
2119 Male, age 80, both hemispheres 107.8
Parvicellular reticular nuclei, medullary
nTPM: 159.9
2189 Female, age 91, both hemispheres 167.9
2181 Male, age 80, left hemisphere 159.7
2091 Female, age 85, both hemispheres 152.1
Pedunculopontine tegmental nucleus
nTPM: 113.8
2334 Male, age 80, both hemispheres 118.0
1921 Female, age 85, both hemispheres 117.4
2338 Male, age 61, both hemispheres 106.0
Peritrigeminal nucleus
nTPM: 132.4
2179 Male, age 61, both hemispheres 157.8
2067 Female, age 85, both hemispheres 119.8
2136 Male, age 76, both hemispheres 119.7
Pontine nuclei
nTPM: 211.7
2787 Female, age 85, both hemispheres 352.4
2727 Male, age 61, right hemisphere 297.5
1863 Male, age 55, unknown 225.5
1968 Male, age 76, left hemisphere 224.3
2109 Female, age 72, unknown 185.5
2454 Male, age 74, left hemisphere 152.7
2115 Male, age 80, left hemisphere 147.3
2319 Female, age 91, both hemispheres 108.0
Pontine raphe nucleus
nTPM: 152.8
2122 Female, age 85, midline 195.4
2853 Male, age 76, midline 110.2
Posteroventral cochlear nucleus
nTPM: 96.2
2752 Female, age 85, both hemispheres 170.3
2070 Male, age 76, both hemispheres 122.1
2371 Male, age 61, both hemispheres 117.4
2341 Male, age 80, both hemispheres 52.8
2135 Female, age 91, both hemispheres 18.1
Prepositus hypoglossal nucleus
nTPM: 121.8
2855 Female, age 85, right hemisphere 129.7
2086 Male, age 80, both hemispheres 113.9
Principal sensory trigeminal nucleus
nTPM: 205.9
2158 Male, age 61, both hemispheres 328.4
2008 Male, age 80, left hemisphere 209.7
2324 Male, age 76, both hemispheres 143.2
2367 Female, age 91, left hemisphere 142.3
Reticular pontine nucleus, caudal
nTPM: 172.6
2332 Male, age 80, right hemisphere 270.5
2092 Male, age 76, both hemispheres 165.5
2457 Female, age 91, both hemispheres 160.0
2559 Male, age 74, both hemispheres 94.3
Reticular pontine nucleus, oral
nTPM: 135.6
2361 Male, age 74, both hemispheres 189.2
2012 Female, age 85, both hemispheres 161.4
2366 Female, age 91, both hemispheres 129.2
2167 Male, age 76, both hemispheres 108.3
1939 Male, age 80, both hemispheres 89.9
Reticulotegmental nucleus
nTPM: 152.9
2325 Male, age 76, both hemispheres 175.9
2452 Male, age 74, both hemispheres 159.7
2333 Male, age 80, both hemispheres 142.1
2322 Female, age 91, both hemispheres 133.9
Spinal trigeminal nucleus, caudal
nTPM: 132.7
2390 Female, age 91, both hemispheres 200.3
2447 Male, age 76, both hemispheres 150.6
2308 Male, age 80, both hemispheres 109.4
2642 Male, age 74, both hemispheres 104.4
2312 Male, age 61, both hemispheres 98.9
Spinal trigeminal nucleus, interpolar
nTPM: 182.6
2625 Male, age 61, both hemispheres 239.4
2066 Male, age 76, right hemisphere 200.1
2389 Female, age 91, both hemispheres 198.2
2386 Female, age 85, both hemispheres 138.6
2033 Male, age 80, both hemispheres 136.6
Spinal trigeminal nucleus, oral
nTPM: 144.1
2737 Female, age 85, both hemispheres 153.7
2164 Male, age 80, both hemispheres 148.9
1978 Male, age 76, both hemispheres 129.7
Spinal vestibular nucleus
nTPM: 142.9
2186 Female, age 91, both hemispheres 177.7
2796 Male, age 61, both hemispheres 161.7
2780 Male, age 80, both hemispheres 156.5
2806 Female, age 85, both hemispheres 132.3
2748 Male, age 76, both hemispheres 129.3
2384 Male, age 74, both hemispheres 99.8
Subcoeruleus area
nTPM: 144.8
2323 Female, age 91, left hemisphere 193.8
2089 Male, age 76, left hemisphere 179.3
1958 Male, age 80, both hemispheres 167.2
2451 Male, age 74, both hemispheres 121.9
2369 Female, age 85, left hemisphere 61.7
Superior olive
nTPM: 194.9
1875 Female, age 85, both hemispheres 232.5
2561 Female, age 91, both hemispheres 213.3
2329 Male, age 80, right hemisphere 200.7
2364 Male, age 74, right hemisphere 168.2
2020 Male, age 76, both hemispheres 159.9
Superior vestibular nucleus
nTPM: 85.3
2015 Male, age 80, both hemispheres 113.2
2061 Male, age 76, both hemispheres 92.1
2383 Male, age 74, both hemispheres 50.8
Ventral medullary reticular nucleus
nTPM: 101.8
2060 Male, age 76, both hemispheres 138.7
2372 Male, age 61, both hemispheres 64.9
Ventral periolivary nuclei
nTPM: 224.0
2130 Female, age 85, both hemispheres 277.6
2165 Male, age 80, both hemispheres 239.3
2794 Female, age 91, left hemisphere 233.5
2023 Male, age 76, both hemispheres 145.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 110.7
2741 Female, age 85, both hemispheres 145.5
1986 Male, age 76, both hemispheres 136.4
2302 Female, age 91, both hemispheres 117.8
2180 Male, age 61, both hemispheres 88.9
2118 Male, age 80, both hemispheres 64.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 173.2
2449 Male, age 74, both hemispheres 254.7
2840 Female, age 85, both hemispheres 180.3
2161 Male, age 80, both hemispheres 177.1
1959 Male, age 76, both hemispheres 175.2
2456 Female, age 91, both hemispheres 153.0
2359 Male, age 61, both hemispheres 99.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 495.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 202.2
FF:10182-103D2 60 years, female 278.0
FF:10165-103B3 76 years, female 126.3
Medulla oblongata
Scaled Tags Per Million: 114.7
FF:10038-101F2 18-64 years, mixed 195.2
FF:10155-103A2 76 years, female 104.3
FF:10174-103C3 60 years, female 44.5
Pons
Scaled Tags Per Million: 495.4
FF:10033-101E6 18-54 years, mixed 495.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 133.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 95.8
Samples: 4

Max nTPM: 117.0
Min nTPM: 45.8
Sample A Female 110.1
Sample B Female 117.0
Sample C Male 110.2
Sample D Male 45.8
Pons
nTPM: 133.1
Samples: 4

Max nTPM: 167.4
Min nTPM: 110.2
Sample A Female 167.4
Sample B Female 110.2
Sample C Male 110.7
Sample D Male 144.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 194.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 194.2
Samples: 4

Max nTPM: 195.6
Min nTPM: 191.8
Sample A Male 191.8
Sample B Male 194.4
Sample C Female 195.6
Sample D Female 194.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 13.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.6
100144175 Antisense, RP_110407_03_C11, Mouse strain C57BL/6J (56 days, male) 13.6
Pons
Expression energy: 12.9
100144175 Antisense, RP_110407_03_C11, Mouse strain C57BL/6J (56 days, male) 12.9

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