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ATP5F1D
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:228.8 nTPM
HPA Brain:150.4 nTPM
GTEx:228.8 nTPM
FANTOM5:443.7 Scaled Tags Per Million
Pig:333.7 nTPM
Mouse:323.4 nTPM
Allen mouse:16.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002865
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

150.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 150.4
2481 Female, age 94, left hemisphere 185.9
2290 Female, age 72, unknown 174.3
2288 Male, age 75, left hemisphere 168.5
1781 Male, age 74, unknown 152.2
2289 Male, age 61, right hemisphere 151.7
1857 Female, age 85, left hemisphere 133.6
1854 Male, age 80, left hemisphere 121.8
2846 Female, age 79, unknown 115.4
Globus pallidus, externus
nTPM: 147.6
2772 Female, age 79, unknown 192.1
2646 Male, age 61, right hemisphere 169.9
1996 Male, age 80, right hemisphere 163.8
2395 Male, age 75, both hemispheres 116.2
2567 Female, age 72, unknown 95.8
Globus pallidus, internus
nTPM: 138.8
2483 Female, age 94, right hemisphere 205.9
2287 Male, age 75, right hemisphere 155.3
2778 Female, age 91, both hemispheres 136.7
1818 Male, age 74, unknown 134.8
2037 Male, age 80, right hemisphere 133.8
2566 Female, age 72, unknown 112.4
2111 Female, age 85, right hemisphere 93.0
Nucleus accumbens
nTPM: 124.3
1783 Male, age 74, unknown 145.0
2286 Male, age 75, left hemisphere 140.1
1806 Female, age 85, left hemisphere 139.7
1856 Female, age 91, right hemisphere 132.1
2698 Female, age 72, unknown 124.6
2732 Male, age 80, right hemisphere 117.7
2824 Male, age 61, right hemisphere 106.8
2391 Female, age 94, left hemisphere 88.3
Nucleus basalis of Meynert
nTPM: 137.5
2569 Male, age 61, both hemispheres 188.1
2484 Female, age 94, left hemisphere 155.7
2821 Male, age 75, both hemispheres 104.3
2393 Male, age 80, right hemisphere 101.7
Nucleus of the diagonal band
nTPM: 135.9
2775 Male, age 80, right hemisphere 152.7
2195 Female, age 85, both hemispheres 151.0
1979 Male, age 74, unknown 133.0
1812 Female, age 91, both hemispheres 131.4
2029 Male, age 61, right hemisphere 111.2
Putamen
nTPM: 138.1
2466 Female, age 79, unknown 151.8
2647 Male, age 75, left hemisphere 146.8
2482 Female, age 94, left hemisphere 145.0
2489 Female, age 72, unknown 140.4
1937 Female, age 91, right hemisphere 137.8
1829 Male, age 74, unknown 126.2
1838 Male, age 80, right hemisphere 118.8
Septal nuclei
nTPM: 135.3
1960 Male, age 74, unknown 198.3
2059 Female, age 85, both hemispheres 165.6
2031 Female, age 72, unknown 140.2
2629 Female, age 94, right hemisphere 114.5
2009 Female, age 91, both hemispheres 113.6
2394 Male, age 61, left hemisphere 110.7
2199 Male, age 80, right hemisphere 104.6
Stria terminalis, bed nucleus
nTPM: 135.5
1974 Female, age 91, both hemispheres 165.5
2486 Female, age 94, both hemispheres 123.8
2201 Male, age 74, unknown 117.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

228.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 200.1
Samples: 246

Max nTPM: 461.6
Min nTPM: 74.7
Std nTPM: 64.5
Median nTPM: 187.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 461.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 404.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 397.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 392.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 384.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 365.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 364.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 347.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 342.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 338.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 332.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 311.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 306.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 305.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 305.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 302.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 296.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 295.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 292.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 291.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 290.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 287.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 284.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 283.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 281.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 280.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 280.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 278.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 277.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 276.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 273.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 270.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 268.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 268.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 265.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 265.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 261.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 261.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 260.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 258.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 258.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 257.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 256.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 255.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 253.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 253.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 252.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 252.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 252.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 250.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 250.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 247.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 244.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 244.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 240.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 239.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 239.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 238.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 237.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 236.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 236.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 236.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 236.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 235.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 235.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 234.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 233.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 231.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 231.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 230.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 229.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 229.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 229.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 229.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 228.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 227.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 226.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 225.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 225.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 224.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 223.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 222.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 220.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 220.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 220.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 218.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 218.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 217.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 217.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 214.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 213.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 212.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 210.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 209.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 209.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 208.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 206.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 206.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 206.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 204.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 198.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 197.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 197.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 196.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 196.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 195.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 194.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 194.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 194.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 194.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 193.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 192.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 192.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 192.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 191.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 191.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 191.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 190.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 189.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 188.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 188.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 188.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 187.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 186.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 186.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 186.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 186.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 185.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 185.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 185.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 185.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 184.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 183.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 183.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 182.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 182.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 181.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 181.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 180.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 179.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 179.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 179.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 179.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 179.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 178.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 177.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 177.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 177.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 176.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 176.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 176.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 176.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 175.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 175.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 175.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 175.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 174.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 174.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 174.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 173.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 173.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 173.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 170.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 169.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 169.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 169.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 168.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 168.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 168.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 167.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 166.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 166.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 166.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 165.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 164.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 164.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 164.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 164.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 163.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 162.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 162.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 161.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 161.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 159.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 159.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 157.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 157.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 157.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 157.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 155.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 154.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 154.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 154.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 153.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 152.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 151.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 151.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 151.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 150.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 150.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 149.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 148.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 148.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 147.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 147.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 146.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 146.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 142.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 142.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 140.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 138.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 137.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 137.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 136.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 136.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 135.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 133.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 131.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 128.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 127.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 122.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 122.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 120.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 120.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 120.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 119.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 117.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 116.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 115.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 113.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 108.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 107.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 106.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 106.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 102.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 102.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 98.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 96.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 92.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 91.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 88.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 86.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 82.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 80.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 80.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 74.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 199.3
Samples: 246

Max nTPM: 640.2
Min nTPM: 48.8
Std nTPM: 69.9
Median nTPM: 186.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 640.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 426.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 423.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 398.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 353.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 352.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 333.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 329.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 327.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 324.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 314.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 309.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 307.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 304.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 302.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 299.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 298.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 298.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 295.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 294.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 293.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 291.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 290.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 290.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 289.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 288.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 285.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 283.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 279.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 279.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 277.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 276.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 270.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 269.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 267.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 267.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 266.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 265.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 263.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 262.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 261.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 258.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 257.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 256.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 255.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 255.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 255.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 254.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 254.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 253.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 251.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 250.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 249.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 247.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 247.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 246.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 246.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 245.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 242.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 240.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 239.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 239.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 238.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 238.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 237.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 235.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 234.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 229.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 229.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 228.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 228.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 228.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 226.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 226.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 226.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 226.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 226.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 226.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 224.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 223.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 221.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 218.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 216.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 216.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 215.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 215.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 215.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 214.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 212.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 212.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 212.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 211.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 210.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 210.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 210.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 209.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 207.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 207.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 206.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 206.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 204.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 204.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 204.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 204.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 203.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 202.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 202.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 201.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 201.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 200.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 199.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 195.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 195.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 194.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 191.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 190.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 189.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 189.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 189.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 188.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 188.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 188.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 187.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 185.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 185.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 185.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 184.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 184.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 183.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 183.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 182.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 182.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 182.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 181.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 180.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 180.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 179.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 179.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 179.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 178.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 178.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 178.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 178.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 178.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 177.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 177.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 176.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 175.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 175.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 175.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 174.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 173.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 173.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 171.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 171.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 168.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 167.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 167.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 166.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 166.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 166.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 165.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 165.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 165.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 164.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 164.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 161.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 160.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 159.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 159.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 159.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 159.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 158.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 157.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 156.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 156.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 154.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 154.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 154.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 153.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 152.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 152.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 152.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 152.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 152.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 152.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 150.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 150.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 150.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 149.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 148.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 148.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 148.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 147.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 147.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 146.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 146.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 145.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 145.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 145.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 144.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 143.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 143.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 142.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 141.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 141.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 139.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 138.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 138.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 137.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 135.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 135.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 135.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 134.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 134.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 133.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 133.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 132.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 131.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 130.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 130.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 129.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 127.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 125.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 124.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 119.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 118.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 118.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 115.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 114.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 110.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 108.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 106.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 106.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 105.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 105.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 101.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 92.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 87.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 86.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 79.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 73.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 68.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 66.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 65.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 48.8
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Brain - Putamen (basal ganglia)
Average nTPM: 228.8
Samples: 205

Max nTPM: 446.4
Min nTPM: 79.6
Std nTPM: 60.9
Median nTPM: 229.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 446.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 431.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 396.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 384.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 347.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 347.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 341.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 340.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 339.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 338.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 334.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 331.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 324.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 318.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 317.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 316.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 313.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 309.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 308.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 305.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 305.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 302.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 299.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 298.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 296.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 295.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 295.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 294.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 294.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 293.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 292.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 290.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 290.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 284.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 281.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 281.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 280.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 279.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 278.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 277.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 275.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 274.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 273.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 272.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 272.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 271.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 271.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 269.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 269.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 268.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 268.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 268.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 268.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 267.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 267.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 266.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 266.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 265.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 263.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 261.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 259.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 258.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 258.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 257.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 257.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 255.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 255.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 255.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 255.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 252.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 252.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 251.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 250.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 246.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 246.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 246.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 245.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 243.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 243.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 243.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 242.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 242.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 242.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 241.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 240.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 240.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 240.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 240.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 240.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 239.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 238.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 238.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 238.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 237.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 236.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 235.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 233.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 232.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 232.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 232.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 231.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 230.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 229.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 229.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 229.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 227.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 225.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 224.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 223.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 222.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 221.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 219.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 219.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 216.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 215.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 214.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 213.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 212.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 212.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 211.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 210.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 210.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 209.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 205.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 205.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 202.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 201.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 198.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 196.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 196.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 196.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 196.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 195.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 194.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 193.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 192.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 192.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 192.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 191.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 191.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 191.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 189.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 188.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 188.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 187.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 187.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 187.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 187.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 186.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 185.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 185.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 184.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 184.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 183.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 182.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 181.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 180.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 180.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 180.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 180.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 179.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 177.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 177.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 177.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 176.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 175.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 174.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 174.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 173.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 172.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 172.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 170.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 170.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 170.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 169.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 168.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 168.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 168.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 166.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 166.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 166.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 165.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 162.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 161.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 160.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 160.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 159.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 158.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 156.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 150.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 149.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 145.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 142.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 141.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 140.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 134.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 133.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 132.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 129.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 118.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 110.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 109.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 104.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 98.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 79.6
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

443.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 266.3
FF:10164-103B2 76 years, female 266.3
Nucleus accumbens
Scaled Tags Per Million: 443.7
FF:10037-101F1 23-56 years, mixed 443.7
Putamen
Scaled Tags Per Million: 364.3
FF:10176-103C5 60 years, female 364.3
Globus pallidus
Scaled Tags Per Million: 227.6
FF:10175-103C4 60 years, female 274.6
FF:10161-103A8 76 years, female 180.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

333.7
Pig sample Sample description nTPM
Caudate
nTPM: 309.2
Samples: 4

Max nTPM: 366.0
Min nTPM: 250.8
Sample A Female 250.8
Sample B Female 344.4
Sample C Male 366.0
Sample D Male 275.4
Putamen
nTPM: 333.7
Samples: 4

Max nTPM: 458.1
Min nTPM: 247.6
Sample A Female 247.6
Sample B Female 283.8
Sample C Male 458.1
Sample D Male 345.2
Septum
nTPM: 244.4
Samples: 4

Max nTPM: 278.8
Min nTPM: 209.9
Sample A Female 278.8
Sample B Female 254.3
Sample C Male 209.9
Sample D Male 234.7
Ventral pallidum
nTPM: 270.2
Samples: 4

Max nTPM: 325.9
Min nTPM: 234.5
Sample A Female 234.5
Sample B Female 325.9
Sample C Male 281.3
Sample D Male 239.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

323.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 288.0
Samples: 4

Max nTPM: 348.6
Min nTPM: 243.9
Sample A Male 282.8
Sample B Male 348.6
Sample C Female 243.9
Sample D Female 276.5
Septum
nTPM: 297.2
Samples: 4

Max nTPM: 324.2
Min nTPM: 250.9
Sample A Male 298.5
Sample B Male 315.0
Sample C Female 324.2
Sample D Female 250.9
Ventral forebrain
nTPM: 323.4
Samples: 4

Max nTPM: 385.0
Min nTPM: 283.0
Sample A Male 327.8
Sample B Male 283.0
Sample C Female 385.0
Sample D Female 297.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 16.6
81600110 Antisense, RP_080205_02_D02, Mouse strain C57BL/6J (56 days, male) 18.7
413792 Antisense, RP_040809_01_E02, Mouse strain C57BL/6J (56 days, male) 14.5
Pallidum
Expression energy: 14.4
81600110 Antisense, RP_080205_02_D02, Mouse strain C57BL/6J (56 days, male) 16.5
413792 Antisense, RP_040809_01_E02, Mouse strain C57BL/6J (56 days, male) 12.4

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