We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SEPTIN3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • SEPTIN3
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:131.6 nTPM
HPA Brain:289.9 nTPM
GTEx:131.6 nTPM
FANTOM5:155.6 Scaled Tags Per Million
Pig:140.7 nTPM
Mouse:225.5 nTPM
Allen mouse:6.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003548Antibody CAB017633
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

289.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 140.7
1781 Male, age 74, unknown 178.8
2290 Female, age 72, unknown 152.0
1857 Female, age 85, left hemisphere 151.7
2288 Male, age 75, left hemisphere 137.8
2481 Female, age 94, left hemisphere 135.1
2289 Male, age 61, right hemisphere 126.6
1854 Male, age 80, left hemisphere 126.4
2846 Female, age 79, unknown 117.5
Globus pallidus, externus
nTPM: 54.6
2646 Male, age 61, right hemisphere 67.7
2772 Female, age 79, unknown 62.3
1996 Male, age 80, right hemisphere 48.3
2567 Female, age 72, unknown 47.4
2395 Male, age 75, both hemispheres 47.1
Globus pallidus, internus
nTPM: 53.5
1818 Male, age 74, unknown 84.1
2483 Female, age 94, right hemisphere 76.8
2566 Female, age 72, unknown 62.4
2037 Male, age 80, right hemisphere 50.8
2287 Male, age 75, right hemisphere 39.8
2778 Female, age 91, both hemispheres 31.3
2111 Female, age 85, right hemisphere 29.5
Nucleus accumbens
nTPM: 142.8
1856 Female, age 91, right hemisphere 215.6
1783 Male, age 74, unknown 176.5
2824 Male, age 61, right hemisphere 153.8
1806 Female, age 85, left hemisphere 151.0
2698 Female, age 72, unknown 136.0
2286 Male, age 75, left hemisphere 130.0
2391 Female, age 94, left hemisphere 93.6
2732 Male, age 80, right hemisphere 86.2
Nucleus basalis of Meynert
nTPM: 94.7
2484 Female, age 94, left hemisphere 111.2
2393 Male, age 80, right hemisphere 99.2
2821 Male, age 75, both hemispheres 94.2
2569 Male, age 61, both hemispheres 74.3
Nucleus of the diagonal band
nTPM: 289.9
1812 Female, age 91, both hemispheres 345.6
2195 Female, age 85, both hemispheres 340.6
2775 Male, age 80, right hemisphere 321.8
2029 Male, age 61, right hemisphere 293.0
1979 Male, age 74, unknown 148.2
Putamen
nTPM: 111.9
1937 Female, age 91, right hemisphere 155.6
1838 Male, age 80, right hemisphere 148.6
2482 Female, age 94, left hemisphere 113.2
1829 Male, age 74, unknown 111.8
2466 Female, age 79, unknown 95.9
2647 Male, age 75, left hemisphere 84.3
2489 Female, age 72, unknown 74.2
Septal nuclei
nTPM: 249.0
1960 Male, age 74, unknown 341.8
2629 Female, age 94, right hemisphere 327.2
2009 Female, age 91, both hemispheres 294.8
2031 Female, age 72, unknown 274.3
2059 Female, age 85, both hemispheres 257.5
2394 Male, age 61, left hemisphere 138.4
2199 Male, age 80, right hemisphere 109.0
Stria terminalis, bed nucleus
nTPM: 259.6
1974 Female, age 91, both hemispheres 348.1
2486 Female, age 94, both hemispheres 283.2
2201 Male, age 74, unknown 147.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 112.6
Samples: 246

Max nTPM: 280.7
Min nTPM: 37.0
Std nTPM: 34.6
Median nTPM: 109.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 280.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 246.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 204.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 199.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 195.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 189.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 186.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 180.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 179.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 167.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 167.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 165.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 165.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 165.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 164.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 162.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 162.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 160.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 160.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 159.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 158.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 156.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 155.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 155.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 153.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 153.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 152.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 151.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 151.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 149.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 147.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 147.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 146.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 146.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 145.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 144.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 144.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 144.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 144.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 143.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 143.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 143.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 142.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 141.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 141.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 140.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 140.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 140.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 138.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 138.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 137.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 137.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 136.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 136.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 135.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 135.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 135.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 134.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 134.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 134.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 133.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 133.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 133.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 132.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 131.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 131.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 130.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 130.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 129.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 129.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 129.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 129.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 128.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 128.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 127.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 127.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 127.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 127.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 126.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 126.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 126.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 125.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 125.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 125.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 123.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 123.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 123.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 123.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 123.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 122.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 121.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 121.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 121.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 121.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 121.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 120.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 120.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 120.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 120.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 120.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 119.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 119.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 119.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 119.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 118.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 118.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 117.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 117.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 116.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 116.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 116.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 115.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 115.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 115.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 114.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 114.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 113.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 113.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 113.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 113.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 110.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 110.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 109.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 109.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 109.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 108.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 108.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 108.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 108.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 108.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 107.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 107.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 107.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 106.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 106.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 106.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 106.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 106.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 105.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 105.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 105.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 104.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 104.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 104.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 104.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 104.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 103.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 103.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 103.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 103.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 103.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 103.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 102.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 102.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 102.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 101.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 101.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 101.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 101.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 100.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 100.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 100.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 99.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 98.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 98.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 96.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 96.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 95.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 95.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 95.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 95.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 94.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 94.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 94.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 94.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 94.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 93.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 93.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 93.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 92.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 92.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 92.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 91.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 89.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 89.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 88.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 88.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 88.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 87.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 86.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 86.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 86.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 85.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 85.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 84.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 83.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 82.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 82.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 82.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 82.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 81.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 80.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 80.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 80.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 79.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 79.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 79.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 78.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 77.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 77.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 77.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 77.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 77.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 76.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 76.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 75.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 75.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 73.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 72.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 70.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 70.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 69.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 68.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 67.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 67.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 66.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 65.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 64.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 63.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 62.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 62.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 60.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 60.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 59.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 56.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 55.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 55.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 54.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 54.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 54.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 48.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 45.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 44.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 43.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 40.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 37.0
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 131.6
Samples: 246

Max nTPM: 216.2
Min nTPM: 19.6
Std nTPM: 37.7
Median nTPM: 138.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 216.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 205.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 196.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 195.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 195.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 191.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 190.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 190.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 189.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 187.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 185.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 185.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 185.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 184.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 182.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 182.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 182.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 180.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 179.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 178.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 178.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 178.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 177.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 177.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 176.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 176.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 173.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 173.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 173.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 173.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 172.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 169.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 168.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 168.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 168.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 168.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 168.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 167.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 167.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 167.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 167.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 166.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 166.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 166.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 165.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 164.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 164.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 164.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 163.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 163.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 162.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 162.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 162.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 160.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 159.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 159.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 159.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 159.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 158.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 158.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 158.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 157.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 157.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 157.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 156.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 156.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 155.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 155.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 155.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 155.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 155.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 154.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 154.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 153.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 153.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 153.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 152.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 152.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 152.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 152.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 152.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 152.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 151.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 150.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 150.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 150.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 150.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 149.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 149.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 149.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 148.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 148.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 148.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 147.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 147.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 147.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 147.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 147.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 147.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 147.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 146.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 146.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 146.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 145.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 145.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 144.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 144.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 144.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 144.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 144.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 144.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 144.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 143.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 143.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 142.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 142.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 142.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 141.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 140.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 139.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 139.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 138.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 138.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 137.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 137.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 137.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 137.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 136.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 136.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 136.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 135.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 135.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 135.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 135.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 134.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 134.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 134.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 133.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 133.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 133.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 133.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 133.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 133.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 133.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 132.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 132.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 132.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 130.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 130.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 129.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 128.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 127.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 126.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 125.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 125.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 125.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 124.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 123.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 123.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 122.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 121.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 120.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 119.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 119.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 119.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 118.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 117.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 116.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 116.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 115.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 114.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 114.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 113.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 112.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 110.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 110.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 110.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 109.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 109.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 108.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 108.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 108.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 108.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 108.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 107.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 106.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 106.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 105.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 105.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 105.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 103.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 103.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 101.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 101.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 100.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 99.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 98.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 98.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 97.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 97.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 97.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 96.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 95.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 94.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 94.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 93.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 92.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 92.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 90.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 89.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 89.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 89.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 89.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 89.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 86.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 85.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 85.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 83.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 79.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 78.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 75.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 72.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 72.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 70.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 69.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 67.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 67.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 66.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 65.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 65.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 64.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 62.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 60.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 59.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 54.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 54.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 53.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 53.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 53.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 51.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 41.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 41.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 40.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 37.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 35.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 19.6
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 89.4
Samples: 205

Max nTPM: 226.4
Min nTPM: 21.2
Std nTPM: 32.5
Median nTPM: 86.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 226.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 183.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 178.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 172.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 166.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 158.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 152.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 146.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 144.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 142.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 140.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 138.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 138.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 137.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 137.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 136.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 136.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 134.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 133.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 133.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 132.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 130.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 129.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 126.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 125.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 125.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 123.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 123.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 123.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 123.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 122.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 121.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 120.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 120.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 120.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 119.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 118.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 118.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 118.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 117.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 117.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 116.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 116.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 116.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 115.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 114.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 112.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 112.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 112.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 112.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 110.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 110.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 109.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 108.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 108.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 107.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 107.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 106.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 105.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 105.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 103.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 103.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 102.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 101.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 101.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 101.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 100.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 100.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 100.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 98.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 98.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 97.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 97.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 96.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 96.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 96.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 96.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 96.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 96.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 95.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 94.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 94.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 94.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 94.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 93.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 93.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 93.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 91.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 91.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 90.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 90.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 89.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 89.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 89.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 88.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 88.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 87.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 87.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 86.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 86.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 86.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 86.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 86.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 85.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 85.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 85.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 85.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 85.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 85.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 84.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 84.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 84.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 83.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 83.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 83.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 82.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 82.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 82.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 81.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 80.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 80.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 80.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 79.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 79.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 78.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 77.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 77.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 77.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 77.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 77.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 76.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 76.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 75.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 75.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 75.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 75.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 74.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 74.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 73.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 73.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 73.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 72.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 72.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 72.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 72.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 72.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 71.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 71.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 71.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 70.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 70.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 69.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 69.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 69.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 69.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 69.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 69.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 67.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 67.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 66.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 66.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 65.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 64.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 63.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 63.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 62.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 61.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 61.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 61.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 60.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 60.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 58.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 58.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 58.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 57.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 56.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 56.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 55.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 55.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 54.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 54.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 53.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 52.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 51.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 50.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 49.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 48.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 46.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 44.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 41.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 41.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 39.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 37.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 36.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 36.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 36.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 35.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 34.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 33.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 32.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 31.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 31.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 21.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 21.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 21.2
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

155.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 88.7
FF:10164-103B2 76 years, female 88.7
Nucleus accumbens
Scaled Tags Per Million: 155.6
FF:10037-101F1 23-56 years, mixed 155.6
Putamen
Scaled Tags Per Million: 126.2
FF:10176-103C5 60 years, female 126.2
Globus pallidus
Scaled Tags Per Million: 41.8
FF:10175-103C4 60 years, female 45.5
FF:10161-103A8 76 years, female 38.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.7
Pig sample Sample description nTPM
Caudate
nTPM: 140.7
Samples: 4

Max nTPM: 165.9
Min nTPM: 122.8
Sample A Female 130.8
Sample B Female 143.4
Sample C Male 165.9
Sample D Male 122.8
Putamen
nTPM: 108.8
Samples: 4

Max nTPM: 128.5
Min nTPM: 72.0
Sample A Female 72.0
Sample B Female 106.5
Sample C Male 128.0
Sample D Male 128.5
Septum
nTPM: 114.8
Samples: 4

Max nTPM: 122.8
Min nTPM: 104.5
Sample A Female 122.8
Sample B Female 121.5
Sample C Male 110.4
Sample D Male 104.5
Ventral pallidum
nTPM: 124.5
Samples: 4

Max nTPM: 135.8
Min nTPM: 110.8
Sample A Female 135.8
Sample B Female 135.1
Sample C Male 116.3
Sample D Male 110.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

225.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 199.8
Samples: 4

Max nTPM: 220.1
Min nTPM: 184.2
Sample A Male 195.1
Sample B Male 184.2
Sample C Female 199.6
Sample D Female 220.1
Septum
nTPM: 209.7
Samples: 4

Max nTPM: 236.4
Min nTPM: 193.5
Sample A Male 236.4
Sample B Male 210.1
Sample C Female 198.7
Sample D Female 193.5
Ventral forebrain
nTPM: 225.5
Samples: 4

Max nTPM: 243.2
Min nTPM: 210.5
Sample A Male 231.5
Sample B Male 210.5
Sample C Female 216.7
Sample D Female 243.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.5
69838258 Antisense, RP_050301_01_B07, Mouse strain C57BL/6J (56 days, male) 4.5
Pallidum
Expression energy: 6.3
69838258 Antisense, RP_050301_01_B07, Mouse strain C57BL/6J (56 days, male) 6.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org