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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:83.0 nTPM
HPA Brain:70.4 nTPM
GTEx:83.0 nTPM
FANTOM5:117.3 Scaled Tags Per Million
Pig:81.3 nTPM
Mouse:210.5 nTPM
Allen mouse:9.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000994Antibody CAB008681
Glial cells MediumHigh
Neuronal cells MediumHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 60.9
2481 Female, age 94, left hemisphere 75.6
2290 Female, age 72, unknown 61.7
1857 Female, age 85, left hemisphere 61.2
2846 Female, age 79, unknown 60.1
1854 Male, age 80, left hemisphere 58.9
2288 Male, age 75, left hemisphere 58.1
1781 Male, age 74, unknown 55.8
2289 Male, age 61, right hemisphere 55.6
Globus pallidus, externus
nTPM: 70.4
1996 Male, age 80, right hemisphere 80.2
2772 Female, age 79, unknown 73.7
2646 Male, age 61, right hemisphere 73.0
2395 Male, age 75, both hemispheres 65.9
2567 Female, age 72, unknown 59.2
Globus pallidus, internus
nTPM: 68.2
2037 Male, age 80, right hemisphere 76.9
2483 Female, age 94, right hemisphere 76.5
2287 Male, age 75, right hemisphere 74.3
1818 Male, age 74, unknown 70.3
2778 Female, age 91, both hemispheres 65.2
2566 Female, age 72, unknown 58.0
2111 Female, age 85, right hemisphere 56.4
Nucleus accumbens
nTPM: 60.7
2286 Male, age 75, left hemisphere 64.0
1856 Female, age 91, right hemisphere 63.0
2391 Female, age 94, left hemisphere 62.8
2698 Female, age 72, unknown 62.4
1806 Female, age 85, left hemisphere 61.2
1783 Male, age 74, unknown 59.3
2732 Male, age 80, right hemisphere 56.7
2824 Male, age 61, right hemisphere 55.9
Nucleus basalis of Meynert
nTPM: 60.7
2569 Male, age 61, both hemispheres 76.7
2821 Male, age 75, both hemispheres 56.8
2393 Male, age 80, right hemisphere 54.8
2484 Female, age 94, left hemisphere 54.7
Nucleus of the diagonal band
nTPM: 61.4
1812 Female, age 91, both hemispheres 63.2
2775 Male, age 80, right hemisphere 63.1
2029 Male, age 61, right hemisphere 61.5
2195 Female, age 85, both hemispheres 60.0
1979 Male, age 74, unknown 59.1
Putamen
nTPM: 57.8
2482 Female, age 94, left hemisphere 67.4
1937 Female, age 91, right hemisphere 61.0
2647 Male, age 75, left hemisphere 58.9
1838 Male, age 80, right hemisphere 56.4
2489 Female, age 72, unknown 54.3
2466 Female, age 79, unknown 54.2
1829 Male, age 74, unknown 52.4
Septal nuclei
nTPM: 58.1
1960 Male, age 74, unknown 68.2
2031 Female, age 72, unknown 61.8
2059 Female, age 85, both hemispheres 60.1
2199 Male, age 80, right hemisphere 55.5
2009 Female, age 91, both hemispheres 55.0
2629 Female, age 94, right hemisphere 53.4
2394 Male, age 61, left hemisphere 52.6
Stria terminalis, bed nucleus
nTPM: 54.9
1974 Female, age 91, both hemispheres 59.6
2201 Male, age 74, unknown 55.6
2486 Female, age 94, both hemispheres 49.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 77.0
Samples: 246

Max nTPM: 128.2
Min nTPM: 42.8
Std nTPM: 15.5
Median nTPM: 74.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 128.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 126.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 122.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 120.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 119.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 117.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 115.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 113.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 112.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 111.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 111.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 111.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 110.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 110.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 104.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 103.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 103.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 102.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 101.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 99.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 99.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 98.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 97.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 97.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 96.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 96.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 96.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 96.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 96.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 94.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 94.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 94.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 94.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 94.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 93.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 92.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 92.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 91.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 91.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 90.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 90.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 90.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 90.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 89.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 89.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 89.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 89.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 88.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 88.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 88.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 88.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 87.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 87.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 87.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 87.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 87.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 86.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 86.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 86.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 86.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 86.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 85.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 85.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 85.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 85.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 85.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 85.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 85.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 84.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 84.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 84.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 83.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 83.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 83.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 83.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 83.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 82.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 82.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 81.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 81.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 81.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 81.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 81.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 80.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 80.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 80.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 80.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 79.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 79.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 79.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 79.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 79.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 79.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 79.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 78.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 78.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 78.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 78.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 77.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 77.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 77.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 77.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 77.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 77.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 77.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 77.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 77.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 77.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 76.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 76.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 76.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 76.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 76.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 76.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 76.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 75.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 75.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 75.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 75.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 75.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 75.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 75.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 74.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 74.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 74.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 74.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 74.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 74.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 73.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 73.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 73.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 73.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 73.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 73.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 73.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 73.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 73.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 73.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 72.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 72.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 72.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 72.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 72.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 72.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 72.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 72.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 71.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 71.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 71.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 70.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 70.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 70.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 70.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 70.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 70.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 70.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 69.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 69.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 69.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 69.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 69.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 69.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 69.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 69.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 68.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 68.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 68.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 68.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 67.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 67.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 67.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 67.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 67.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 67.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 67.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 66.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 66.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 66.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 66.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 66.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 66.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 66.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 65.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 65.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 65.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 65.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 65.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 65.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 65.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 65.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 64.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 64.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 64.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 64.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 64.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 64.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 63.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 63.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 63.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 63.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 63.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 63.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 62.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 62.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 62.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 62.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 62.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 62.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 61.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 61.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 61.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 61.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 61.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 61.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 61.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 61.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 60.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 60.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 59.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 59.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 59.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 59.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 59.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 59.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 59.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 59.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 58.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 58.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 58.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 58.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 57.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 57.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 57.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 56.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 56.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 56.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 55.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 55.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 52.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 52.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 52.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 51.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 51.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 50.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 47.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 42.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 81.8
Samples: 246

Max nTPM: 174.7
Min nTPM: 50.6
Std nTPM: 18.5
Median nTPM: 77.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 174.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 166.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 145.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 129.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 127.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 125.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 125.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 120.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 118.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 118.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 118.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 116.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 116.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 114.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 112.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 110.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 110.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 110.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 109.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 107.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 107.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 107.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 107.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 104.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 104.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 103.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 103.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 103.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 102.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 101.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 101.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 101.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 100.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 100.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 100.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 100.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 99.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 99.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 99.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 99.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 98.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 98.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 98.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 98.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 97.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 97.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 97.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 95.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 95.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 95.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 95.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 94.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 94.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 94.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 93.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 93.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 93.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 92.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 92.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 92.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 92.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 91.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 91.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 91.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 91.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 90.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 90.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 90.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 90.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 90.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 89.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 89.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 89.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 88.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 88.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 88.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 88.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 88.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 87.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 87.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 87.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 87.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 87.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 86.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 86.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 86.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 86.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 85.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 85.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 85.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 84.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 84.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 84.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 84.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 83.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 83.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 83.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 82.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 82.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 82.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 82.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 81.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 81.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 81.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 81.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 81.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 81.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 81.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 81.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 81.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 80.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 80.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 80.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 80.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 80.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 79.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 79.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 78.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 78.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 78.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 78.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 77.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 77.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 77.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 77.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 77.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 77.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 77.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 76.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 76.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 76.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 76.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 76.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 76.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 76.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 76.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 76.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 75.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 75.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 75.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 75.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 75.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 75.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 75.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 75.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 74.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 74.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 74.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 74.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 73.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 73.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 73.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 73.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 73.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 73.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 73.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 72.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 72.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 72.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 72.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 71.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 71.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 70.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 70.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 70.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 70.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 70.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 70.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 70.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 70.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 69.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 69.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 69.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 69.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 69.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 69.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 68.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 68.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 68.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 68.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 68.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 68.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 68.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 68.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 67.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 67.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 67.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 67.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 67.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 67.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 67.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 66.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 66.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 66.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 66.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 66.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 66.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 66.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 65.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 65.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 65.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 65.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 65.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 64.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 64.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 64.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 64.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 64.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 64.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 64.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 64.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 64.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 64.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 63.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 63.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 63.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 63.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 63.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 63.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 63.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 62.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 62.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 62.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 62.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 61.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 61.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 61.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 60.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 60.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 59.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 59.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 59.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 59.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 59.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 59.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 59.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 58.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 58.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 57.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 57.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 57.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 57.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 55.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 53.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 52.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 50.6
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Brain - Putamen (basal ganglia)
Average nTPM: 83.0
Samples: 205

Max nTPM: 145.4
Min nTPM: 44.1
Std nTPM: 17.6
Median nTPM: 80.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 145.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 142.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 138.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 136.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 131.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 128.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 127.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 122.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 116.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 116.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 115.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 113.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 113.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 112.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 112.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 112.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 110.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 108.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 106.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 106.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 105.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 104.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 104.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 103.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 103.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 103.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 103.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 102.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 102.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 101.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 101.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 100.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 100.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 99.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 99.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 99.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 98.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 97.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 96.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 96.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 94.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 94.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 93.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 93.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 93.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 92.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 92.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 91.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 91.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 90.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 90.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 90.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 90.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 90.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 89.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 89.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 89.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 89.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 89.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 89.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 89.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 88.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 88.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 88.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 88.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 88.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 88.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 88.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 88.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 87.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 86.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 86.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 86.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 86.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 86.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 85.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 85.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 85.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 85.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 85.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 85.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 85.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 85.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 84.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 84.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 84.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 83.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 83.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 82.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 82.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 82.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 82.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 82.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 82.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 81.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 81.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 81.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 81.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 81.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 81.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 81.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 80.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 80.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 80.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 80.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 80.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 80.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 80.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 79.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 79.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 79.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 79.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 79.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 78.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 78.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 78.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 77.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 77.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 77.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 77.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 77.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 76.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 76.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 76.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 76.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 76.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 76.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 76.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 76.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 75.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 75.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 75.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 74.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 74.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 73.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 73.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 73.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 73.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 72.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 72.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 72.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 72.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 72.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 72.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 72.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 72.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 71.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 71.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 71.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 71.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 71.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 70.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 70.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 70.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 70.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 70.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 70.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 70.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 69.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 69.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 69.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 69.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 69.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 69.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 68.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 68.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 68.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 67.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 66.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 66.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 66.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 66.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 66.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 65.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 65.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 65.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 65.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 65.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 65.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 65.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 64.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 64.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 64.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 64.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 64.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 64.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 63.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 63.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 63.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 63.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 63.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 62.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 62.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 61.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 61.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 60.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 59.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 59.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 57.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 57.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 54.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 54.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 51.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 50.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 44.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

117.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 90.4
FF:10164-103B2 76 years, female 90.4
Nucleus accumbens
Scaled Tags Per Million: 74.4
FF:10037-101F1 23-56 years, mixed 74.4
Putamen
Scaled Tags Per Million: 109.6
FF:10176-103C5 60 years, female 109.6
Globus pallidus
Scaled Tags Per Million: 117.3
FF:10175-103C4 60 years, female 165.5
FF:10161-103A8 76 years, female 69.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.3
Pig sample Sample description nTPM
Caudate
nTPM: 71.2
Samples: 4

Max nTPM: 96.7
Min nTPM: 55.6
Sample A Female 60.1
Sample B Female 72.3
Sample C Male 96.7
Sample D Male 55.6
Putamen
nTPM: 81.3
Samples: 4

Max nTPM: 107.2
Min nTPM: 58.2
Sample A Female 81.9
Sample B Female 58.2
Sample C Male 107.2
Sample D Male 77.8
Septum
nTPM: 67.6
Samples: 4

Max nTPM: 76.3
Min nTPM: 63.0
Sample A Female 65.8
Sample B Female 63.0
Sample C Male 76.3
Sample D Male 65.4
Ventral pallidum
nTPM: 68.5
Samples: 4

Max nTPM: 83.8
Min nTPM: 57.5
Sample A Female 57.5
Sample B Female 75.1
Sample C Male 83.8
Sample D Male 57.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

210.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 210.6
Samples: 4

Max nTPM: 221.9
Min nTPM: 199.7
Sample A Male 199.7
Sample B Male 219.2
Sample C Female 201.4
Sample D Female 221.9
Septum
nTPM: 201.7
Samples: 4

Max nTPM: 234.0
Min nTPM: 176.3
Sample A Male 176.3
Sample B Male 234.0
Sample C Female 211.3
Sample D Female 185.3
Ventral forebrain
nTPM: 209.2
Samples: 4

Max nTPM: 246.1
Min nTPM: 189.4
Sample A Male 189.4
Sample B Male 192.6
Sample C Female 246.1
Sample D Female 208.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 9.0
70192153 Antisense, RP_050517_01_D03, Mouse strain C57BL/6J (56 days, male) 9.0
71670705 Antisense, RP_050517_01_D03, Mouse strain C57BL/6J (56 days, male) 8.6
Pallidum
Expression energy: 7.4
70192153 Antisense, RP_050517_01_D03, Mouse strain C57BL/6J (56 days, male) 7.4
71670705 Antisense, RP_050517_01_D03, Mouse strain C57BL/6J (56 days, male) 7.2

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