HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:68.5 nTPM
HPA Brain:31.4 nTPM
GTEx:68.5 nTPM
FANTOM5:74.4 Scaled Tags Per Million
Pig:121.8 nTPM
Mouse:133.6 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 31.4
Sample id Sample description nTPM
Hippocampus
nTPM: 29.1
1898 Male, age 80, left hemisphere 37.1
1855 Male, age 76, left hemisphere 30.1
2529 Female, age 94, left hemisphere 29.5
1911 Female, age 85, right hemisphere 29.4
2148 Female, age 91, left hemisphere 24.9
2621 Female, age 67, right hemisphere 23.6
Dentate gyrus
nTPM: 29.6
2530 Female, age 94, left hemisphere 34.4
2010 Male, age 76, both hemispheres 33.8
1927 Female, age 91, both hemispheres 32.8
2528 Male, age 74, both hemispheres 28.2
2246 Female, age 85, both hemispheres 27.2
2531 Female, age 67, both hemispheres 21.4
Entorhinal gyrus
nTPM: 27.5
2764 Male, age 80, right hemisphere 32.1
1938 Female, age 85, left hemisphere 31.3
1787 Male, age 76, left hemisphere 27.8
2117 Female, age 91, right hemisphere 27.1
2613 Female, age 94, left hemisphere 24.0
2686 Male, age 75, right hemisphere 22.9
Hippocampus, CA1
nTPM: 31.4
2749 Male, age 80, left hemisphere 41.5
1873 Female, age 85, both hemispheres 31.2
2045 Male, age 76, both hemispheres 30.9
2527 Male, age 74, both hemispheres 28.7
2082 Female, age 91, right hemisphere 24.7
Hippocampus, CA2
nTPM: 31.1
1963 Male, age 80, left hemisphere 40.9
1892 Male, age 76, both hemispheres 33.2
2249 Male, age 74, both hemispheres 32.4
2437 Female, age 94, left hemisphere 27.8
1940 Female, age 85, left hemisphere 27.1
2113 Female, age 91, right hemisphere 25.5
Hippocampus, CA3
nTPM: 26.4
1867 Male, age 76, both hemispheres 32.3
2137 Male, age 80, left hemisphere 31.1
1891 Female, age 85, both hemispheres 29.7
2436 Male, age 74, both hemispheres 28.8
2620 Female, age 94, left hemisphere 18.2
2861 Female, age 67, both hemispheres 18.1
Parahippocampal cortex
nTPM: 27.4
1850 Male, age 80, both hemispheres 33.6
2018 Male, age 76, both hemispheres 31.1
2250 Female, age 67, right hemisphere 30.0
1990 Female, age 91, right hemisphere 29.0
1933 Female, age 85, both hemispheres 28.9
2245 Female, age 91, both hemispheres 27.3
2693 Female, age 94, both hemispheres 26.4
2692 Male, age 74, both hemispheres 26.3
2532 Female, age 72, left hemisphere 25.0
2622 Female, age 67, right hemisphere 16.8
Perirhinal gyrus
nTPM: 31.3
1847 Female, age 91, left hemisphere 34.6
1794 Male, age 80, right hemisphere 33.7
1841 Female, age 85, right hemisphere 33.3
2521 Female, age 94, right hemisphere 28.6
2848 Male, age 76, right hemisphere 26.1
Subiculum
nTPM: 28.2
1977 Female, age 85, both hemispheres 32.8
1901 Male, age 80, both hemispheres 30.5
2042 Male, age 76, both hemispheres 28.5
2438 Female, age 94, left hemisphere 27.8
2729 Female, age 91, right hemisphere 26.1
2619 Male, age 74, both hemispheres 23.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 68.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.5
Samples: 197

Max nTPM: 187.3
Min nTPM: 37.2
Std nTPM: 16.9
Median nTPM: 66.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 187.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 128.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 121.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 117.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 107.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 103.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 103.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 97.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 96.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 95.2
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 93.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 74.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.4
FF:10169-103B7 60 years, female 85.1
FF:10153-102I9 76 years, female 63.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 121.8
Pig sample Sample description nTPM
Subiculum
nTPM: 104.0
Samples: 4

Max nTPM: 135.5
Min nTPM: 84.9
Sample A Female 135.5
Sample B Female 101.8
Sample C Male 84.9
Sample D Male 93.6
Dorsal hippocampus
nTPM: 121.8
Samples: 4

Max nTPM: 159.7
Min nTPM: 89.3
Sample A Female 159.7
Sample B Female 110.8
Sample C Male 127.5
Sample D Male 89.3
Entorhinal cortex
nTPM: 104.9
Samples: 4

Max nTPM: 132.5
Min nTPM: 83.6
Sample A Female 98.6
Sample B Female 132.5
Sample C Male 104.7
Sample D Male 83.6
Ventral hippocampus
nTPM: 102.6
Samples: 4

Max nTPM: 116.1
Min nTPM: 86.0
Sample A Female 116.1
Sample B Female 86.0
Sample C Male 96.7
Sample D Male 111.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 133.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 129.9
Samples: 4

Max nTPM: 137.4
Min nTPM: 126.3
Sample A Male 126.3
Sample B Male 127.5
Sample C Female 137.4
Sample D Female 128.3
Hippocampal formation
nTPM: 133.6
Samples: 4

Max nTPM: 145.5
Min nTPM: 126.1
Sample A Male 145.5
Sample B Male 126.1
Sample C Female 130.1
Sample D Female 132.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
69262239 Antisense, RP_050301_01_G10, Mouse strain C57BL/6J (56 days, male) 5.2

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