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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:161.5 nTPM
GTEx:161.5 nTPM
FANTOM5:281.5 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029207Antibody CAB003815
Squamous epithelial cells MediumNot detected





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

161.5
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 161.5
Samples: 156

Max nTPM: 564.5
Min nTPM: 49.9
Std nTPM: 78.9
Median nTPM: 149.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 564.5
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 511.4
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 400.8
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 396.4
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 346.5
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 346.3
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 301.9
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 296.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 288.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 286.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 286.2
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 265.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 261.5
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 260.9
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 253.3
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 253.0
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 250.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 244.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 238.4
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 237.6
GTEX-11I78-2026-SM-5987C 50-59 years, female 233.4
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 228.8
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 224.4
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 218.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 218.8
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 218.5
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 217.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 213.3
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 210.3
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 207.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 206.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 206.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 204.6
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 204.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 203.2
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 200.6
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 198.2
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 197.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 194.4
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 194.2
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 193.5
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 193.1
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 191.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 190.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 187.0
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 187.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 185.4
GTEX-16NPV-2526-SM-6M483 50-59 years, female 185.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 184.6
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 182.7
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 182.4
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 180.7
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 178.9
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 175.7
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 174.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 172.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 167.6
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 166.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 165.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 165.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 164.6
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 164.2
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 163.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 163.1
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 162.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 161.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 159.9
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 159.4
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 158.6
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 156.5
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 156.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 155.5
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 155.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 153.0
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 150.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 150.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 149.5
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 149.4
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 149.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 146.1
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 145.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 145.2
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 144.5
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 143.4
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 141.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 140.6
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 138.9
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 137.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 134.0
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 133.4
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 133.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 130.3
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 127.5
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 126.5
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 126.1
GTEX-1C475-0526-SM-793AC 40-49 years, female 125.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 124.9
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 124.8
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 124.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 124.5
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 123.1
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 122.2
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 121.6
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 121.2
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 120.6
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 120.5
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 119.1
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 115.7
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 115.2
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 115.0
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 114.0
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 113.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 112.4
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 112.2
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 110.6
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 109.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 108.6
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 107.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 105.6
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 103.2
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 103.0
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 102.7
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 100.5
GTEX-S341-1226-SM-4AD5S 40-49 years, female 98.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 97.7
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 97.3
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 94.7
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 93.0
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 92.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 92.4
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 90.8
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 90.7
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 90.3
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 89.9
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 89.5
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 89.4
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 88.9
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 88.6
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 86.7
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 86.7
GTEX-QCQG-1226-SM-48U23 50-59 years, female 85.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 84.0
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 82.2
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 81.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 78.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 77.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 75.9
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 74.2
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 69.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 66.6
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 66.4
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 64.6
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 61.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 61.0
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 57.8
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 49.9
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

281.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 281.5
FF:10204-103F6 68 years, female 281.5

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