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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:88.7 nTPM
HPA Brain:122.1 nTPM
GTEx:88.7 nTPM
FANTOM5:91.1 Scaled Tags Per Million
Pig:93.5 nTPM
Mouse:198.0 nTPM
Allen mouse:14.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA026866
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

122.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 88.2
2846 Female, age 79, unknown 99.5
1781 Male, age 74, unknown 97.7
2288 Male, age 75, left hemisphere 97.4
2290 Female, age 72, unknown 93.6
1857 Female, age 85, left hemisphere 93.0
1854 Male, age 80, left hemisphere 88.1
2289 Male, age 61, right hemisphere 72.8
2481 Female, age 94, left hemisphere 63.2
Globus pallidus, externus
nTPM: 120.1
2395 Male, age 75, both hemispheres 132.0
2772 Female, age 79, unknown 131.8
2567 Female, age 72, unknown 117.3
2646 Male, age 61, right hemisphere 110.2
1996 Male, age 80, right hemisphere 109.2
Globus pallidus, internus
nTPM: 122.1
2778 Female, age 91, both hemispheres 148.2
2287 Male, age 75, right hemisphere 137.5
2111 Female, age 85, right hemisphere 131.0
2566 Female, age 72, unknown 126.5
1818 Male, age 74, unknown 115.4
2037 Male, age 80, right hemisphere 105.2
2483 Female, age 94, right hemisphere 91.0
Nucleus accumbens
nTPM: 100.2
1783 Male, age 74, unknown 110.4
1806 Female, age 85, left hemisphere 110.3
1856 Female, age 91, right hemisphere 108.2
2698 Female, age 72, unknown 99.1
2824 Male, age 61, right hemisphere 96.1
2286 Male, age 75, left hemisphere 95.5
2391 Female, age 94, left hemisphere 93.3
2732 Male, age 80, right hemisphere 89.1
Nucleus basalis of Meynert
nTPM: 95.9
2569 Male, age 61, both hemispheres 103.3
2821 Male, age 75, both hemispheres 98.4
2484 Female, age 94, left hemisphere 94.8
2393 Male, age 80, right hemisphere 87.1
Nucleus of the diagonal band
nTPM: 90.6
1812 Female, age 91, both hemispheres 102.1
2195 Female, age 85, both hemispheres 90.8
2775 Male, age 80, right hemisphere 89.2
2029 Male, age 61, right hemisphere 87.5
1979 Male, age 74, unknown 83.5
Putamen
nTPM: 94.9
1937 Female, age 91, right hemisphere 111.1
2647 Male, age 75, left hemisphere 101.2
2466 Female, age 79, unknown 99.5
1829 Male, age 74, unknown 97.5
2489 Female, age 72, unknown 89.7
1838 Male, age 80, right hemisphere 88.8
2482 Female, age 94, left hemisphere 76.2
Septal nuclei
nTPM: 91.8
2394 Male, age 61, left hemisphere 105.5
1960 Male, age 74, unknown 102.2
2059 Female, age 85, both hemispheres 92.6
2031 Female, age 72, unknown 91.4
2009 Female, age 91, both hemispheres 85.9
2199 Male, age 80, right hemisphere 83.7
2629 Female, age 94, right hemisphere 81.3
Stria terminalis, bed nucleus
nTPM: 91.3
1974 Female, age 91, both hemispheres 99.5
2486 Female, age 94, both hemispheres 91.5
2201 Male, age 74, unknown 82.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 77.8
Samples: 246

Max nTPM: 143.3
Min nTPM: 32.0
Std nTPM: 19.2
Median nTPM: 78.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 143.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 137.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 132.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 128.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 122.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 121.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 120.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 117.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 113.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 110.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 110.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 110.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 108.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 105.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 105.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 104.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 103.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 102.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 102.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 101.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 101.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 101.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 101.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 100.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 100.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 99.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 99.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 99.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 99.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 99.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 98.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 98.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 97.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 97.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 96.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 96.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 96.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 96.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 95.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 95.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 95.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 95.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 95.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 94.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 94.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 94.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 94.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 93.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 93.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 93.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 93.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 92.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 92.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 92.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 92.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 92.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 92.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 91.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 91.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 90.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 89.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 89.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 89.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 89.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 89.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 89.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 88.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 88.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 88.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 88.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 88.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 88.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 87.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 87.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 87.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 87.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 86.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 86.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 86.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 85.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 85.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 85.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 85.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 85.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 85.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 85.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 85.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 84.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 84.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 84.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 84.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 84.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 84.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 83.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 83.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 83.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 83.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 83.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 83.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 83.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 83.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 83.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 83.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 82.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 82.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 82.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 82.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 81.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 81.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 81.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 81.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 80.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 80.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 80.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 80.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 80.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 80.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 80.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 79.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 79.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 78.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 78.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 78.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 78.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 78.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 77.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 77.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 76.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 76.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 76.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 76.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 76.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 76.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 76.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 75.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 75.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 75.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 75.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 75.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 75.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 75.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 74.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 74.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 74.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 74.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 74.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 73.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 73.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 72.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 72.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 72.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 71.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 70.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 70.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 70.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 70.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 69.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 69.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 69.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 69.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 69.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 68.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 68.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 68.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 68.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 67.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 67.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 67.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 67.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 67.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 67.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 67.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 67.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 66.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 66.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 66.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 66.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 66.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 66.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 65.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 65.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 65.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 65.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 65.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 65.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 64.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 63.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 62.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 62.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 62.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 62.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 62.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 62.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 61.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 61.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 60.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 60.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 60.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 59.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 59.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 59.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 59.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 59.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 58.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 58.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 58.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 58.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 58.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 57.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 57.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 57.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 56.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 56.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 55.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 55.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 54.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 54.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 54.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 53.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 53.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 53.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 52.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 52.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 51.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 51.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 51.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 51.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 51.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 50.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 49.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 48.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 48.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 47.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 46.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 44.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 44.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 44.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 43.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 43.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 43.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 42.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 41.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 40.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 39.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 37.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 32.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 88.7
Samples: 246

Max nTPM: 183.5
Min nTPM: 31.6
Std nTPM: 20.2
Median nTPM: 87.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 183.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 153.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 144.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 139.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 132.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 131.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 123.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 121.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 121.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 120.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 120.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 120.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 119.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 119.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 118.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 118.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 118.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 116.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 115.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 115.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 115.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 113.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 113.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 113.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 112.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 112.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 111.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 111.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 111.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 110.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 110.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 110.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 109.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 109.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 109.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 109.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 108.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 108.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 108.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 108.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 108.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 107.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 107.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 107.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 106.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 106.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 105.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 105.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 104.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 104.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 104.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 104.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 104.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 103.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 103.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 103.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 103.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 103.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 103.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 102.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 102.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 102.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 102.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 101.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 100.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 100.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 100.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 99.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 99.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 99.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 99.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 99.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 98.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 98.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 98.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 98.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 97.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 97.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 96.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 96.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 96.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 96.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 96.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 96.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 96.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 95.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 95.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 95.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 95.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 95.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 95.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 95.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 94.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 93.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 93.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 93.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 93.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 93.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 93.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 92.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 92.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 92.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 91.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 91.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 91.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 91.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 91.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 91.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 91.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 91.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 90.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 90.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 90.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 90.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 90.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 90.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 89.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 89.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 89.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 89.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 88.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 88.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 88.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 87.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 87.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 87.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 86.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 86.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 86.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 86.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 86.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 86.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 86.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 86.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 85.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 85.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 85.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 85.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 85.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 85.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 85.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 85.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 84.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 84.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 83.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 83.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 83.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 82.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 82.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 82.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 81.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 81.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 81.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 81.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 81.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 81.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 80.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 80.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 80.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 80.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 80.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 79.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 79.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 79.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 79.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 79.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 79.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 78.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 78.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 78.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 78.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 78.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 78.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 77.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 77.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 77.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 77.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 76.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 76.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 76.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 76.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 76.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 76.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 76.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 76.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 76.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 75.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 75.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 75.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 75.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 75.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 74.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 74.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 74.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 74.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 74.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 74.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 73.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 73.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 72.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 72.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 71.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 71.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 71.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 71.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 70.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 70.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 70.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 69.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 69.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 69.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 69.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 68.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 68.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 68.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 68.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 67.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 67.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 67.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 67.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 64.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 62.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 62.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 61.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 60.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 60.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 60.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 60.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 59.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 59.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 59.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 58.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 58.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 57.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 57.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 56.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 54.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 51.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 50.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 50.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 50.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 43.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 39.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 38.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 36.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 31.6
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Brain - Putamen (basal ganglia)
Average nTPM: 85.4
Samples: 205

Max nTPM: 147.2
Min nTPM: 39.1
Std nTPM: 21.5
Median nTPM: 86.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 147.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 138.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 131.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 131.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 130.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 128.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 127.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 126.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 123.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 123.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 119.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 118.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 117.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 115.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 115.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 114.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 114.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 114.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 113.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 112.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 112.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 112.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 112.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 111.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 111.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 110.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 110.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 110.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 109.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 109.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 108.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 108.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 108.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 107.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 107.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 107.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 107.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 106.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 106.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 104.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 104.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 103.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 103.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 103.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 102.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 102.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 101.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 101.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 101.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 100.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 100.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 99.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 99.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 99.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 99.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 98.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 98.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 98.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 98.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 97.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 97.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 97.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 96.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 96.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 95.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 95.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 95.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 95.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 95.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 95.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 94.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 94.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 94.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 94.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 94.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 94.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 93.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 92.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 91.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 91.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 91.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 91.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 91.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 91.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 90.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 90.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 89.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 89.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 89.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 89.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 88.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 88.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 88.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 88.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 88.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 87.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 87.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 86.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 86.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 86.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 86.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 86.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 86.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 85.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 85.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 85.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 85.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 85.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 84.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 83.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 83.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 83.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 83.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 82.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 82.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 81.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 81.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 81.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 81.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 80.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 80.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 80.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 80.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 79.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 79.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 78.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 78.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 78.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 77.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 77.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 77.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 76.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 76.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 76.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 76.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 75.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 75.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 75.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 74.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 74.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 74.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 74.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 73.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 73.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 73.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 73.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 72.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 72.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 72.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 72.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 71.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 70.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 70.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 69.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 69.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 69.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 69.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 68.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 68.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 68.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 67.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 67.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 66.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 66.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 66.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 65.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 65.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 65.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 64.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 64.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 64.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 62.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 61.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 61.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 61.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 60.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 59.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 59.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 59.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 58.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 58.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 58.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 58.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 57.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 57.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 56.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 55.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 54.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 52.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 52.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 51.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 51.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 50.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 49.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 49.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 48.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 48.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 46.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 46.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 45.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 44.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 43.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 42.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 40.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 39.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

91.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 60.1
FF:10164-103B2 76 years, female 60.1
Nucleus accumbens
Scaled Tags Per Million: 91.1
FF:10037-101F1 23-56 years, mixed 91.1
Putamen
Scaled Tags Per Million: 88.8
FF:10176-103C5 60 years, female 88.8
Globus pallidus
Scaled Tags Per Million: 77.3
FF:10161-103A8 76 years, female 77.8
FF:10175-103C4 60 years, female 76.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.5
Pig sample Sample description nTPM
Caudate
nTPM: 83.0
Samples: 4

Max nTPM: 101.1
Min nTPM: 63.1
Sample A Female 63.1
Sample B Female 84.6
Sample C Male 101.1
Sample D Male 83.3
Putamen
nTPM: 93.5
Samples: 4

Max nTPM: 112.4
Min nTPM: 77.3
Sample A Female 89.4
Sample B Female 77.3
Sample C Male 112.4
Sample D Male 94.7
Septum
nTPM: 71.1
Samples: 4

Max nTPM: 77.0
Min nTPM: 58.8
Sample A Female 77.0
Sample B Female 72.7
Sample C Male 75.8
Sample D Male 58.8
Ventral pallidum
nTPM: 83.4
Samples: 4

Max nTPM: 98.4
Min nTPM: 68.3
Sample A Female 68.3
Sample B Female 87.4
Sample C Male 98.4
Sample D Male 79.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

198.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 198.1
Samples: 4

Max nTPM: 213.5
Min nTPM: 183.5
Sample A Male 213.5
Sample B Male 192.8
Sample C Female 183.5
Sample D Female 202.4
Septum
nTPM: 172.3
Samples: 4

Max nTPM: 196.3
Min nTPM: 158.5
Sample A Male 163.7
Sample B Male 196.3
Sample C Female 170.6
Sample D Female 158.5
Ventral forebrain
nTPM: 192.2
Samples: 4

Max nTPM: 202.3
Min nTPM: 184.4
Sample A Male 191.9
Sample B Male 184.4
Sample C Female 202.3
Sample D Female 190.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 14.3
70445532 Antisense, RP_050614_04_A08, Mouse strain C57BL/6J (56 days, male) 14.3
Pallidum
Expression energy: 12.8
70445532 Antisense, RP_050614_04_A08, Mouse strain C57BL/6J (56 days, male) 12.8

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