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MYL12A
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  • MYL12A
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Endocrine cells: High
Enterocytes: Not detected
Enterocytes - Microvilli: Low
Goblet cells: Not detected
Paneth cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:323.2 nTPM
HPA:323.2 nTPM
GTEx:291.5 nTPM
FANTOM5:530.5 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA039262Antibody HPA045244Antibody HPA059197Antibody CAB004503
Endocrine cells --High-
Enterocytes --Not detected-
Enterocytes - Microvilli --Low-
Glandular cells LowLow-Medium
Goblet cells --Not detected-
Paneth cells --Not detected-








SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

323.2
overview
Male, age 65
Small intestine sample 232
nTPM: 297.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 369.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 298.8
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 327.4

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

291.5
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 291.5
Samples: 187

Max nTPM: 559.8
Min nTPM: 99.0
Std nTPM: 70.3
Median nTPM: 285.9
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 559.8
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 542.2
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 452.6
GTEX-YFCO-1326-SM-664NV 40-49 years, male 429.9
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 420.2
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 416.9
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 416.0
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 415.8
GTEX-111YS-1426-SM-5GID8 60-69 years, male 414.0
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 408.7
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 394.9
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 394.0
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 393.5
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 391.8
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 390.6
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 387.9
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 386.9
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 382.7
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 381.5
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 375.9
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 373.7
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 373.0
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 370.7
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 370.1
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 369.4
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 368.0
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 367.3
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 366.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 363.9
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 362.4
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 359.9
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 355.9
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 353.6
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 351.9
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 349.3
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 348.8
GTEX-14PK6-1626-SM-6871I 70-79 years, female 348.5
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 347.1
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 347.0
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 345.6
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 344.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 339.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 338.7
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 338.6
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 337.9
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 334.8
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 331.4
GTEX-183FY-1626-SM-793D8 20-29 years, male 330.2
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 328.3
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 327.8
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 327.1
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 326.7
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 326.2
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 325.1
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 324.4
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 323.9
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 323.2
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 322.2
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 321.6
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 320.7
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 320.0
GTEX-ZTSS-0926-SM-59865 40-49 years, male 319.5
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 319.3
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 319.2
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 316.9
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 316.3
GTEX-14PKU-1626-SM-6871C 40-49 years, female 314.5
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 314.4
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 313.1
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 312.2
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 311.0
GTEX-1C475-1426-SM-793CH 40-49 years, female 309.4
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 307.2
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 306.2
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 304.9
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 303.0
GTEX-144GM-1026-SM-79OKU 20-29 years, male 301.9
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 301.3
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 300.0
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 298.4
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 297.4
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 295.1
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 294.9
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 294.0
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 293.4
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 293.3
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 292.7
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 292.6
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 289.6
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 288.5
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 288.4
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 287.5
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 287.4
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 285.9
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 285.7
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 284.5
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 284.2
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 283.5
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 283.3
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 283.2
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 282.0
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 280.9
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 280.7
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 278.5
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 277.3
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 275.5
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 274.5
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 273.0
GTEX-14PN3-2026-SM-68729 60-69 years, female 273.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 272.5
GTEX-1192X-2526-SM-59868 50-59 years, male 271.9
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 271.7
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 270.9
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 270.4
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 270.1
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 269.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 269.6
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 269.4
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 269.1
GTEX-13O61-1326-SM-5KM31 60-69 years, male 268.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 267.7
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 266.9
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 266.6
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 266.1
GTEX-13113-1226-SM-5EGHT 60-69 years, female 264.7
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 263.0
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 261.6
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 261.4
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 261.1
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 260.6
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 260.0
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 256.1
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 255.9
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 254.3
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 253.2
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 252.3
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 252.2
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 250.8
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 250.7
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 249.1
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 247.3
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 247.3
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 245.0
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 244.6
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 244.3
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 242.8
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 242.0
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 241.9
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 240.8
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 239.0
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 238.9
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 238.4
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 237.7
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 237.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 237.0
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 236.0
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 235.2
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 231.3
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 227.7
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 227.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 226.4
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 225.5
GTEX-117YX-0326-SM-5GICL 50-59 years, male 224.2
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 221.7
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 221.7
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 210.7
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 201.2
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 198.9
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 197.9
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 197.8
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 193.1
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 191.5
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 190.0
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 188.7
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 188.5
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 183.1
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 175.6
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 168.8
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 167.4
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 167.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 165.4
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 164.1
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 149.9
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 145.9
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 144.2
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 134.2
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 99.0
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

530.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 530.5
FF:10024-101D6 15,40,85 years, mixed 530.5

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