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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:232.9 nTPM
GTEx:232.9 nTPM
FANTOM5:394.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA039262Antibody HPA045244Antibody HPA059197Antibody CAB004503
Squamous epithelial cells Not detectedNot detectedMediumNot detected








VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

232.9
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 232.9
Samples: 156

Max nTPM: 492.7
Min nTPM: 103.2
Std nTPM: 61.5
Median nTPM: 232.8
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 492.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 433.4
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 397.5
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 382.5
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 364.1
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 353.4
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 346.9
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 346.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 341.6
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 332.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 331.8
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 323.4
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 319.1
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 316.4
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 308.4
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 307.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 302.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 299.6
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 298.9
GTEX-14PKU-1326-SM-6871B 40-49 years, female 298.4
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 295.5
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 293.4
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 293.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 292.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 290.8
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 287.0
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 282.8
GTEX-1C475-0526-SM-793AC 40-49 years, female 277.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 275.4
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 274.1
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 271.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 270.6
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 270.0
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 269.1
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 267.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 266.7
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 266.3
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 265.4
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 265.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 264.0
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 262.6
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 262.5
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 261.2
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 261.1
GTEX-11I78-2026-SM-5987C 50-59 years, female 260.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 260.4
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 260.1
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 259.8
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 258.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 257.8
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 254.2
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 253.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 253.3
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 253.2
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 252.8
GTEX-S341-1226-SM-4AD5S 40-49 years, female 252.5
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 252.1
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 251.4
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 251.3
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 251.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 250.3
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 249.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 248.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 247.7
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 246.9
GTEX-16NPV-2526-SM-6M483 50-59 years, female 246.2
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 243.1
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 241.8
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 241.7
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 241.1
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 239.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 239.0
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 238.5
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 237.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 236.3
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 235.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 234.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 234.1
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 231.5
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 231.1
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 230.3
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 227.5
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 225.4
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 224.6
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 224.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 222.2
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 220.9
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 219.2
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 219.1
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 217.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 217.5
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 215.3
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 214.6
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 212.8
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 211.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 207.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 205.1
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 204.9
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 202.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 201.7
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 200.2
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 200.2
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 196.9
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 196.8
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 196.8
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 195.8
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 195.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 191.1
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 191.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 190.8
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 189.4
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 189.0
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 188.8
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 187.5
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 186.1
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 185.8
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 184.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 184.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 183.8
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 183.7
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 182.3
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 181.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 180.8
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 178.4
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 175.5
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 174.2
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 173.6
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 173.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 172.9
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 172.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 172.0
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 172.0
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 171.9
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 171.6
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 171.2
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 170.3
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 169.8
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 169.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 168.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 165.0
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 163.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 160.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 159.9
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 159.9
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 156.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 154.0
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 151.4
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 151.0
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 148.5
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 145.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 144.8
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 141.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 134.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 132.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 131.5
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 103.2
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

394.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 394.1
FF:10204-103F6 68 years, female 394.1

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