We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PGRMC1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PGRMC1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:120.6 nTPM
HPA Brain:124.0 nTPM
GTEx:120.6 nTPM
FANTOM5:246.1 Scaled Tags Per Million
Pig:264.9 nTPM
Mouse:527.1 nTPM
Allen mouse:14.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002877Antibody HPA064724
Glial cells MediumNot detected
Neuronal cells LowHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 69.3
2288 Male, age 75, left hemisphere 98.5
1781 Male, age 74, unknown 73.1
2846 Female, age 79, unknown 72.4
1857 Female, age 85, left hemisphere 72.1
2290 Female, age 72, unknown 68.6
1854 Male, age 80, left hemisphere 66.9
2481 Female, age 94, left hemisphere 54.4
2289 Male, age 61, right hemisphere 48.5
Globus pallidus, externus
nTPM: 62.0
2395 Male, age 75, both hemispheres 97.0
2772 Female, age 79, unknown 82.3
1996 Male, age 80, right hemisphere 65.8
2646 Male, age 61, right hemisphere 33.2
2567 Female, age 72, unknown 31.9
Globus pallidus, internus
nTPM: 80.1
2287 Male, age 75, right hemisphere 132.9
2111 Female, age 85, right hemisphere 97.6
2778 Female, age 91, both hemispheres 93.6
1818 Male, age 74, unknown 68.5
2566 Female, age 72, unknown 61.6
2037 Male, age 80, right hemisphere 58.9
2483 Female, age 94, right hemisphere 47.6
Nucleus accumbens
nTPM: 90.6
1856 Female, age 91, right hemisphere 113.4
2698 Female, age 72, unknown 94.8
2286 Male, age 75, left hemisphere 93.8
1783 Male, age 74, unknown 92.4
2824 Male, age 61, right hemisphere 91.9
1806 Female, age 85, left hemisphere 89.9
2732 Male, age 80, right hemisphere 75.1
2391 Female, age 94, left hemisphere 73.1
Nucleus basalis of Meynert
nTPM: 64.3
2821 Male, age 75, both hemispheres 99.5
2484 Female, age 94, left hemisphere 68.1
2393 Male, age 80, right hemisphere 60.2
2569 Male, age 61, both hemispheres 29.5
Nucleus of the diagonal band
nTPM: 124.0
1812 Female, age 91, both hemispheres 142.0
2775 Male, age 80, right hemisphere 137.7
2195 Female, age 85, both hemispheres 126.1
2029 Male, age 61, right hemisphere 110.7
1979 Male, age 74, unknown 103.6
Putamen
nTPM: 61.2
1937 Female, age 91, right hemisphere 81.5
1838 Male, age 80, right hemisphere 71.4
2466 Female, age 79, unknown 70.0
1829 Male, age 74, unknown 61.7
2482 Female, age 94, left hemisphere 61.0
2647 Male, age 75, left hemisphere 44.8
2489 Female, age 72, unknown 38.2
Septal nuclei
nTPM: 111.2
1960 Male, age 74, unknown 140.0
2031 Female, age 72, unknown 130.7
2629 Female, age 94, right hemisphere 116.2
2009 Female, age 91, both hemispheres 111.4
2394 Male, age 61, left hemisphere 104.6
2059 Female, age 85, both hemispheres 90.5
2199 Male, age 80, right hemisphere 85.1
Stria terminalis, bed nucleus
nTPM: 115.2
1974 Female, age 91, both hemispheres 128.7
2486 Female, age 94, both hemispheres 119.5
2201 Male, age 74, unknown 97.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 86.1
Samples: 246

Max nTPM: 200.2
Min nTPM: 33.3
Std nTPM: 26.7
Median nTPM: 83.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 200.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 172.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 164.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 147.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 147.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 141.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 140.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 139.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 137.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 137.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 137.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 136.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 135.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 134.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 134.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 132.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 132.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 131.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 128.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 126.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 125.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 125.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 124.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 122.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 121.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 120.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 119.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 119.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 119.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 115.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 115.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 115.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 115.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 114.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 113.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 112.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 112.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 112.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 111.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 111.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 110.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 110.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 110.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 109.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 109.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 109.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 109.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 109.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 108.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 108.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 108.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 107.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 107.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 107.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 107.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 106.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 106.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 106.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 105.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 105.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 103.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 103.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 103.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 102.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 101.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 99.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 97.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 97.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 97.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 97.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 97.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 97.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 97.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 97.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 96.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 96.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 96.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 96.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 95.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 95.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 95.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 95.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 95.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 94.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 94.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 93.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 92.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 91.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 91.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 91.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 90.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 90.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 89.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 89.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 89.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 89.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 88.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 88.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 88.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 88.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 88.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 88.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 88.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 88.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 88.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 87.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 87.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 86.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 86.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 86.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 86.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 85.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 85.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 85.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 85.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 85.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 85.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 84.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 84.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 84.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 84.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 84.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 83.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 83.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 83.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 83.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 83.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 81.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 81.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 81.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 80.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 80.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 79.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 79.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 79.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 79.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 79.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 79.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 78.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 78.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 78.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 78.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 78.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 78.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 78.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 78.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 77.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 77.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 77.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 77.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 77.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 77.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 77.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 77.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 76.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 76.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 76.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 75.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 75.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 74.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 74.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 73.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 73.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 73.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 73.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 72.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 72.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 72.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 71.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 71.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 71.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 70.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 70.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 70.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 70.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 69.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 69.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 69.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 67.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 67.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 67.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 67.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 67.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 66.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 66.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 64.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 64.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 64.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 63.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 63.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 63.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 62.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 62.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 62.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 62.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 62.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 62.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 62.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 62.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 62.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 61.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 61.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 61.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 61.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 61.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 61.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 60.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 60.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 59.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 59.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 59.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 59.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 58.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 58.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 58.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 58.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 57.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 57.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 56.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 56.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 55.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 54.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 54.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 53.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 53.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 53.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 52.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 52.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 52.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 51.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 51.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 49.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 48.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 47.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 46.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 45.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 45.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 44.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 42.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 42.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 40.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 39.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 38.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 35.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 33.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 33.3
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 120.6
Samples: 246

Max nTPM: 228.6
Min nTPM: 37.6
Std nTPM: 38.9
Median nTPM: 120.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 228.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 223.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 216.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 208.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 201.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 199.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 197.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 194.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 193.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 192.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 192.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 191.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 189.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 187.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 186.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 180.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 179.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 178.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 177.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 175.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 174.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 170.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 169.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 169.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 168.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 168.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 167.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 166.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 164.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 163.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 163.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 162.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 162.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 161.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 161.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 161.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 160.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 160.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 160.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 160.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 158.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 156.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 155.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 155.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 155.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 154.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 154.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 154.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 153.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 152.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 152.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 151.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 151.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 150.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 150.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 149.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 149.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 147.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 147.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 146.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 145.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 145.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 145.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 145.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 145.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 145.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 145.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 142.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 142.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 142.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 141.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 141.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 141.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 140.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 140.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 140.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 140.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 139.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 138.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 138.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 138.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 138.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 138.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 137.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 137.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 137.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 137.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 137.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 137.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 136.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 135.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 135.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 135.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 134.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 134.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 134.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 132.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 131.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 131.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 130.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 130.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 130.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 129.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 129.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 129.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 129.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 129.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 128.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 128.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 128.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 127.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 127.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 127.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 126.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 126.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 126.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 126.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 125.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 125.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 124.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 123.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 122.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 121.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 120.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 119.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 119.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 119.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 118.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 118.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 118.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 117.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 117.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 117.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 116.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 116.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 115.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 114.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 114.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 113.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 113.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 112.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 109.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 108.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 108.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 108.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 108.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 108.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 107.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 107.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 107.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 107.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 106.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 106.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 106.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 106.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 106.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 106.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 106.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 105.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 105.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 105.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 104.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 104.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 104.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 104.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 104.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 104.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 104.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 102.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 101.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 101.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 100.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 100.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 99.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 98.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 98.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 96.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 96.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 96.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 95.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 95.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 95.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 94.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 94.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 93.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 93.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 92.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 92.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 92.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 91.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 91.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 91.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 90.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 88.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 88.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 88.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 88.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 87.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 87.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 87.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 86.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 86.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 86.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 85.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 84.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 84.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 82.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 82.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 80.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 80.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 80.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 77.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 74.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 73.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 73.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 71.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 70.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 69.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 67.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 66.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 64.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 63.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 63.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 63.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 62.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 62.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 61.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 60.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 60.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 60.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 59.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 57.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 56.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 56.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 54.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 52.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 52.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 51.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 51.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 47.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 44.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 40.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 38.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 38.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 38.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 37.6
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 85.2
Samples: 205

Max nTPM: 178.2
Min nTPM: 30.4
Std nTPM: 28.0
Median nTPM: 81.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 178.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 164.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 162.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 155.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 155.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 154.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 148.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 142.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 142.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 139.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 134.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 134.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 133.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 130.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 130.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 128.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 127.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 127.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 126.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 125.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 125.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 124.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 122.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 118.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 117.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 116.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 116.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 116.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 116.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 115.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 114.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 114.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 114.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 114.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 114.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 113.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 110.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 110.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 109.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 109.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 108.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 107.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 107.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 107.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 107.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 106.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 105.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 105.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 105.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 105.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 104.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 102.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 100.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 100.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 100.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 100.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 98.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 98.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 98.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 97.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 97.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 96.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 96.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 95.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 94.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 93.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 93.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 92.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 92.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 92.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 92.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 91.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 91.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 91.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 91.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 91.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 91.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 90.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 88.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 88.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 88.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 87.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 87.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 87.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 87.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 86.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 86.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 86.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 86.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 86.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 85.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 85.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 85.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 84.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 84.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 84.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 83.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 82.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 82.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 82.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 82.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 82.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 81.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 81.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 80.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 80.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 80.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 80.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 80.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 80.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 79.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 79.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 78.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 78.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 77.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 77.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 77.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 76.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 76.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 75.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 75.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 75.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 74.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 73.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 73.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 73.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 73.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 72.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 72.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 72.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 71.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 71.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 71.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 71.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 71.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 70.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 70.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 69.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 68.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 68.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 67.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 67.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 67.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 67.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 67.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 67.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 67.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 65.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 65.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 65.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 64.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 64.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 64.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 64.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 63.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 63.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 63.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 62.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 62.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 62.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 62.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 62.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 61.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 60.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 60.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 60.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 59.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 58.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 58.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 58.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 58.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 58.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 57.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 57.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 55.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 55.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 54.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 54.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 54.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 54.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 54.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 53.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 53.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 53.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 53.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 52.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 52.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 52.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 52.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 49.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 48.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 47.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 47.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 46.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 46.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 46.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 44.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 43.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 43.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 42.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 41.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 39.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 38.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 37.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 30.4
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

246.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 131.4
FF:10164-103B2 76 years, female 131.4
Nucleus accumbens
Scaled Tags Per Million: 177.6
FF:10037-101F1 23-56 years, mixed 177.6
Putamen
Scaled Tags Per Million: 246.1
FF:10176-103C5 60 years, female 246.1
Globus pallidus
Scaled Tags Per Million: 160.1
FF:10175-103C4 60 years, female 192.2
FF:10161-103A8 76 years, female 127.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

264.9
Pig sample Sample description nTPM
Caudate
nTPM: 264.9
Samples: 4

Max nTPM: 291.7
Min nTPM: 243.2
Sample A Female 259.7
Sample B Female 264.8
Sample C Male 291.7
Sample D Male 243.2
Putamen
nTPM: 249.7
Samples: 4

Max nTPM: 341.9
Min nTPM: 161.2
Sample A Female 161.2
Sample B Female 232.5
Sample C Male 341.9
Sample D Male 263.1
Septum
nTPM: 260.2
Samples: 4

Max nTPM: 310.0
Min nTPM: 189.0
Sample A Female 310.0
Sample B Female 251.8
Sample C Male 290.0
Sample D Male 189.0
Ventral pallidum
nTPM: 235.2
Samples: 4

Max nTPM: 272.4
Min nTPM: 200.5
Sample A Female 272.4
Sample B Female 238.6
Sample C Male 200.5
Sample D Male 229.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

527.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 294.4
Samples: 4

Max nTPM: 310.3
Min nTPM: 282.7
Sample A Male 297.6
Sample B Male 287.0
Sample C Female 282.7
Sample D Female 310.3
Septum
nTPM: 527.1
Samples: 4

Max nTPM: 584.5
Min nTPM: 500.6
Sample A Male 513.3
Sample B Male 584.5
Sample C Female 500.6
Sample D Female 509.8
Ventral forebrain
nTPM: 370.4
Samples: 4

Max nTPM: 397.1
Min nTPM: 349.5
Sample A Male 363.8
Sample B Male 371.1
Sample C Female 397.1
Sample D Female 349.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 13.9
77454574 Antisense, RP_070129_01_A03, Mouse strain C57BL/6J (56 days, male) 22.8
2478 Antisense, RP_Baylor_103188, Mouse strain C57BL/6J (56 days, male) 14.2
2479 Antisense, RP_Baylor_103188, Mouse strain C57BL/6J (56 days, male) 7.4
797 Antisense, RP_040324_01_A05, Mouse strain C57BL/6J (56 days, male) 4.7
Pallidum
Expression energy: 14.1
77454574 Antisense, RP_070129_01_A03, Mouse strain C57BL/6J (56 days, male) 20.6
2478 Antisense, RP_Baylor_103188, Mouse strain C57BL/6J (56 days, male) 15.0
2479 Antisense, RP_Baylor_103188, Mouse strain C57BL/6J (56 days, male) 9.4
797 Antisense, RP_040324_01_A05, Mouse strain C57BL/6J (56 days, male) 6.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org