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PCSK1N
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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Not detected
Cells in molecular layer: Not detected
Purkinje cells: Not detected
Mouse brain, Intensity
Cerebellumi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

20.122
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:159.2 nTPM
HPA Brain:374.5 nTPM
GTEx:159.2 nTPM
FANTOM5:244.3 Scaled Tags Per Million
Pig:295.8 nTPM
Mouse:20.4 nTPM
Allen mouse:5.9 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003925Antibody HPA064734
Purkinje cells Not detectedNot detected
Cells in granular layer Not detectedNot detected
Cells in molecular layer Not detectedNot detected





CEREBELLUM - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA003925
Cerebellum mean intensity 20.122
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Vestibulocerebellar nucleus -
Moleuclar layer of the cerebellum 13.114
Purkinje layer of the cerebellum 20.122
Granular layer of the cerebellum 12.674

CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

374.5
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 183.8
2101 Male, age 74, right hemisphere 245.1
1769 Male, age 76, right hemisphere 234.9
2055 Female, age 91, right hemisphere 211.9
1768 Female, age 72, unknown 202.0
2006 Male, age 61, right hemisphere 189.4
1774 Male, age 80, left hemisphere 158.0
2003 Female, age 85, right hemisphere 142.1
1788 Male, age 55, unknown 87.2
Cerebellar nuclei
nTPM: 374.5
2882 Male, age 76, left hemisphere 512.3
2783 Female, age 72, unknown 485.2
2177 Female, age 85, both hemispheres 479.3
1966 Female, age 91, left hemisphere 469.0
2175 Male, age 61, right hemisphere 317.9
1871 Male, age 74, unknown 301.3
2005 Male, age 80, left hemisphere 299.8
1879 Male, age 55, unknown 281.1
2318 Male, age 74, left hemisphere 224.2
Flocculonodular lobe
nTPM: 193.7
1792 Male, age 74, unknown 254.1
2176 Female, age 91, right hemisphere 248.4
1765 Male, age 55, unknown 208.1
1767 Male, age 76, left hemisphere 180.4
1771 Male, age 80, left hemisphere 176.2
1835 Female, age 85, right hemisphere 162.8
2004 Male, age 61, right hemisphere 126.2
Vermis
nTPM: 203.0
1766 Male, age 55, unknown 284.9
2834 Male, age 80, left hemisphere 236.4
1770 Male, age 76, left hemisphere 234.9
1928 Female, age 72, unknown 203.9
1825 Male, age 74, unknown 192.1
1751 Male, age 74, right hemisphere 186.9
1778 Female, age 91, left hemisphere 186.0
1988 Female, age 85, left hemisphere 181.1
2460 Male, age 61, both hemispheres 120.4

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.2
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 159.2
Samples: 215

Max nTPM: 368.6
Min nTPM: 27.9
Std nTPM: 67.0
Median nTPM: 151.3
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 368.6
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 362.0
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 345.0
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 340.4
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 316.5
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 315.3
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 312.9
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 310.5
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 303.6
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 301.3
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 297.4
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 281.9
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 276.9
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 276.2
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 265.7
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 261.4
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 257.4
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 254.7
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 254.2
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 248.6
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 246.8
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 245.9
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 243.3
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 240.6
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 240.2
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 238.0
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 234.8
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 233.5
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 232.8
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 232.5
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 228.8
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 228.6
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 223.0
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 222.6
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 220.9
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 220.5
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 218.4
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 217.8
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 217.6
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 217.4
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 217.1
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 217.0
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 215.2
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 214.2
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 211.4
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 208.2
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 207.3
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 205.4
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 204.9
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 204.6
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 200.0
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 199.1
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 198.9
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 197.2
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 196.8
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 195.1
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 193.7
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 193.3
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 192.0
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 190.0
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 190.0
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 189.3
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 189.1
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 188.3
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 188.2
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 187.4
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 187.2
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 186.5
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 186.3
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 186.2
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 185.9
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 185.5
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 185.0
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 183.6
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 183.4
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 181.5
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 181.4
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 180.8
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 178.6
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 177.0
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 174.9
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 173.6
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 173.3
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 172.7
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 170.1
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 170.0
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 169.1
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 167.9
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 166.8
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 165.7
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 165.5
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 164.7
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 163.8
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 161.6
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 159.9
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 159.6
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 159.4
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 157.7
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 155.7
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 155.7
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 155.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 155.4
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 155.0
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 153.1
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 152.3
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 152.1
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 152.0
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 151.3
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 150.3
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 149.6
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 149.2
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 149.1
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 149.1
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 148.9
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 147.5
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 147.3
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 147.3
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 145.1
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 144.9
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 143.2
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 141.5
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 140.9
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 140.5
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 140.2
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 139.4
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 139.3
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 138.5
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 138.3
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 138.3
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 136.3
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 135.6
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 135.0
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 134.9
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 134.4
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 134.1
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 133.8
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 132.5
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 131.4
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 130.7
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 130.1
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 129.7
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 128.4
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 127.6
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 125.6
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 124.1
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 123.4
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 123.4
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 122.6
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 122.2
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 121.2
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 118.8
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 118.1
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 117.9
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 117.6
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 115.7
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 115.4
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 115.2
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 113.7
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 113.5
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 113.2
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 112.9
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 112.8
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 112.6
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 112.2
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 108.0
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 107.4
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 107.0
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 106.8
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 106.2
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 106.1
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 104.8
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 104.6
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 103.9
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 102.5
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 100.9
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 98.9
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 97.6
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 97.2
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 95.7
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 94.3
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 89.3
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 89.1
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 89.0
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 86.5
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 86.3
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 82.1
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 82.1
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 80.3
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 76.5
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 76.0
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 75.1
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 74.5
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 72.6
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 72.6
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 72.3
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 71.9
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 71.7
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 71.5
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 71.0
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 71.0
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 67.9
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 67.4
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 67.2
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 61.9
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 60.4
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 59.2
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 57.7
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 57.5
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 56.7
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 56.6
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 55.8
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 51.6
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 44.8
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 35.1
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 27.9
Show allShow less
Brain - Cerebellum
Average nTPM: 156.0
Samples: 241

Max nTPM: 293.9
Min nTPM: 14.7
Std nTPM: 58.1
Median nTPM: 156.3
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 293.9
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 291.2
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 287.5
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 285.7
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 272.7
GTEX-13112-2926-SM-5DUWT 50-59 years, male 270.1
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 269.2
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 265.0
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 261.9
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 261.8
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 257.1
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 256.9
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 254.3
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 252.2
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 249.0
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 248.6
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 247.4
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 247.0
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 246.7
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 246.1
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 239.4
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 239.3
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 238.2
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 235.1
GTEX-11NUK-3026-SM-5986K 50-59 years, male 234.5
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 234.5
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 234.3
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 234.2
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 232.5
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 231.7
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 230.4
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 230.0
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 229.7
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 228.9
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 228.6
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 228.3
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 226.0
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 223.5
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 218.3
GTEX-144GL-2926-SM-5O99F 50-59 years, male 217.0
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 216.2
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 214.6
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 210.5
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 210.3
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 210.0
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 208.5
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 207.8
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 207.6
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 207.2
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 206.3
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 206.2
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 203.6
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 200.6
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 198.3
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 196.0
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 194.8
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 194.4
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 194.4
GTEX-X261-3126-SM-4PQZC 50-59 years, male 194.0
GTEX-1192X-3226-SM-5987D 50-59 years, male 192.6
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 192.5
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 191.4
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 190.0
GTEX-14E6D-2926-SM-664OP 50-59 years, male 188.2
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 186.4
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 186.4
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 186.0
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 185.6
GTEX-18465-2926-SM-7KFSE 50-59 years, male 185.0
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 184.4
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 184.0
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 181.9
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 181.9
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 181.8
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 181.6
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 181.4
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 179.6
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 179.1
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 178.8
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 178.2
GTEX-14ABY-3026-SM-664NE 50-59 years, male 177.6
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 177.5
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 176.2
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 175.0
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 174.2
GTEX-145LS-3026-SM-5O99S 60-69 years, female 174.1
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 173.6
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 173.2
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 173.1
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 172.8
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 171.7
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 171.2
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 171.1
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 170.9
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 170.8
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 170.7
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 170.6
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 168.5
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 168.3
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 167.9
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 167.7
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 167.5
GTEX-11ONC-3026-SM-5985W 60-69 years, male 166.1
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 165.7
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 164.6
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 164.5
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 164.2
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 164.0
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 163.2
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 162.5
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 160.7
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 160.1
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 159.7
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 159.1
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 157.4
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 157.4
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 157.4
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 157.3
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 156.8
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 156.5
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 156.3
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 155.5
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 155.3
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 155.1
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 155.0
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 154.5
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 154.4
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 152.1
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 150.2
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 150.1
GTEX-WL46-2826-SM-3LK81 50-59 years, male 149.8
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 149.7
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 149.5
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 149.3
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 149.1
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 148.6
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 147.0
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 146.2
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 145.8
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 145.3
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 145.1
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 144.9
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 144.4
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 143.9
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 143.6
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 143.2
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 142.4
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 142.1
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 142.1
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 141.9
GTEX-12126-0926-SM-5FQTW 20-29 years, male 141.7
GTEX-14PN4-3026-SM-664O4 50-59 years, male 141.2
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 141.0
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 140.4
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 139.0
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 138.5
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 138.0
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 137.7
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 136.9
GTEX-11EI6-2926-SM-5985U 60-69 years, male 131.7
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 127.6
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 127.6
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 126.6
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 125.5
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 125.0
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 124.6
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 123.9
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 123.0
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 122.6
GTEX-17HII-2926-SM-79OMK 50-59 years, male 121.7
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 121.2
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 121.1
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 120.5
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 119.9
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 119.0
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 118.9
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 118.4
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 117.0
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 116.5
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 115.5
GTEX-17EVP-2926-SM-793BU 40-49 years, male 113.8
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 113.5
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 112.9
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 112.6
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 112.5
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 110.1
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 109.7
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 109.5
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 109.1
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 107.5
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 105.6
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 104.8
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 104.4
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 102.6
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 100.4
GTEX-11DYG-2926-SM-5H132 60-69 years, male 99.3
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 99.1
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 98.9
GTEX-RU72-2926-SM-2TF66 50-59 years, female 98.9
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 98.1
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 97.9
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 97.1
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 96.1
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 95.6
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 95.0
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 93.4
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 92.0
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 90.8
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 90.8
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 90.4
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 90.1
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 88.3
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 85.6
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 84.8
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 84.5
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 84.1
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 81.1
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 76.9
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 73.5
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 72.1
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 70.8
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 70.0
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 69.0
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 68.5
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 66.0
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 63.6
GTEX-15G19-2826-SM-6M48K 60-69 years, male 61.5
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 60.9
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 54.8
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 54.1
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 53.7
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 52.5
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 48.9
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 47.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 47.8
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 47.6
GTEX-1B933-3026-SM-731DB 50-59 years, female 46.4
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 44.2
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 44.1
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 26.3
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 14.7
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

244.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 244.3
FF:10083-102B2 22-68 years, mixed 375.2
FF:10166-103B4 76 years, female 113.4

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

295.8
Pig sample Sample description nTPM
Cerebellum
nTPM: 295.8
Samples: 4

Max nTPM: 539.0
Min nTPM: 201.0
Sample A Female 539.0
Sample B Female 241.1
Sample C Male 201.0
Sample D Male 202.1

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.4
Mouse sample Sample description nTPM
Cerebellum
nTPM: 20.5
Samples: 4

Max nTPM: 29.8
Min nTPM: 9.0
Sample A Male 29.8
Sample B Male 29.2
Sample C Female 13.8
Sample D Female 9.0

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.9
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 5.9
79360249 Antisense, RP_071018_01_E06, Mouse strain C57BL/6J (56 days, male) 10.3
777 Antisense, RP_040315_01_19, Mouse strain C57BL/6J (56 days, male) 1.6
778 Antisense, RP_040315_01_19, Mouse strain C57BL/6J (56 days, male) 1.5

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