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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:138.8 nTPM
HPA Brain:281.2 nTPM
GTEx:138.8 nTPM
FANTOM5:389.0 Scaled Tags Per Million
Pig:80.0 nTPM
Mouse:118.3 nTPM
Allen mouse:15.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003103Antibody HPA037536
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

281.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 200.1
1781 Male, age 74, unknown 223.4
1857 Female, age 85, left hemisphere 218.4
2290 Female, age 72, unknown 218.4
2846 Female, age 79, unknown 205.7
2288 Male, age 75, left hemisphere 199.4
1854 Male, age 80, left hemisphere 194.1
2289 Male, age 61, right hemisphere 184.5
2481 Female, age 94, left hemisphere 156.8
Globus pallidus, externus
nTPM: 122.7
2395 Male, age 75, both hemispheres 144.0
2772 Female, age 79, unknown 140.6
2646 Male, age 61, right hemisphere 131.1
1996 Male, age 80, right hemisphere 108.5
2567 Female, age 72, unknown 89.4
Globus pallidus, internus
nTPM: 120.9
2287 Male, age 75, right hemisphere 180.8
2483 Female, age 94, right hemisphere 146.8
1818 Male, age 74, unknown 117.9
2778 Female, age 91, both hemispheres 112.7
2566 Female, age 72, unknown 107.7
2037 Male, age 80, right hemisphere 97.6
2111 Female, age 85, right hemisphere 82.8
Nucleus accumbens
nTPM: 229.6
1856 Female, age 91, right hemisphere 320.8
1783 Male, age 74, unknown 268.8
2824 Male, age 61, right hemisphere 263.7
1806 Female, age 85, left hemisphere 231.5
2698 Female, age 72, unknown 231.3
2286 Male, age 75, left hemisphere 202.4
2732 Male, age 80, right hemisphere 178.8
2391 Female, age 94, left hemisphere 139.5
Nucleus basalis of Meynert
nTPM: 145.6
2484 Female, age 94, left hemisphere 161.9
2821 Male, age 75, both hemispheres 152.3
2393 Male, age 80, right hemisphere 142.5
2569 Male, age 61, both hemispheres 125.9
Nucleus of the diagonal band
nTPM: 281.2
1812 Female, age 91, both hemispheres 301.3
2775 Male, age 80, right hemisphere 296.0
2195 Female, age 85, both hemispheres 282.4
1979 Male, age 74, unknown 277.4
2029 Male, age 61, right hemisphere 248.8
Putamen
nTPM: 174.7
1937 Female, age 91, right hemisphere 225.0
1838 Male, age 80, right hemisphere 222.4
2466 Female, age 79, unknown 200.5
1829 Male, age 74, unknown 168.2
2482 Female, age 94, left hemisphere 149.5
2647 Male, age 75, left hemisphere 138.4
2489 Female, age 72, unknown 118.9
Septal nuclei
nTPM: 240.0
2031 Female, age 72, unknown 305.8
1960 Male, age 74, unknown 277.7
2009 Female, age 91, both hemispheres 271.6
2629 Female, age 94, right hemisphere 261.7
2059 Female, age 85, both hemispheres 200.7
2394 Male, age 61, left hemisphere 183.9
2199 Male, age 80, right hemisphere 178.5
Stria terminalis, bed nucleus
nTPM: 280.7
1974 Female, age 91, both hemispheres 307.2
2486 Female, age 94, both hemispheres 276.4
2201 Male, age 74, unknown 258.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

138.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 98.3
Samples: 246

Max nTPM: 197.6
Min nTPM: 49.5
Std nTPM: 30.7
Median nTPM: 95.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 197.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 182.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 174.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 166.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 165.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 163.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 162.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 160.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 160.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 159.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 156.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 152.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 152.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 152.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 150.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 149.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 148.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 147.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 146.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 145.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 145.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 144.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 143.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 143.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 142.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 141.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 141.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 139.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 139.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 138.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 137.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 132.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 132.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 132.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 131.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 131.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 131.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 131.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 130.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 130.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 130.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 129.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 129.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 129.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 129.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 128.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 128.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 128.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 128.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 127.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 127.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 126.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 125.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 125.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 124.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 124.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 122.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 122.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 121.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 119.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 118.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 118.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 117.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 117.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 117.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 117.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 117.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 117.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 116.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 114.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 114.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 114.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 114.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 113.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 113.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 112.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 112.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 111.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 110.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 110.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 110.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 110.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 110.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 110.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 110.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 109.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 109.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 108.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 107.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 107.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 106.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 106.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 106.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 105.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 105.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 104.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 104.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 103.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 103.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 102.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 102.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 102.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 102.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 102.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 101.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 101.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 101.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 101.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 101.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 100.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 100.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 100.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 99.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 99.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 98.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 98.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 97.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 97.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 96.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 96.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 96.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 96.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 95.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 94.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 94.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 94.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 93.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 93.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 93.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 93.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 93.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 92.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 91.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 91.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 91.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 90.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 90.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 89.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 89.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 89.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 88.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 88.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 88.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 88.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 87.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 87.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 87.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 87.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 87.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 85.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 85.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 84.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 84.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 84.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 83.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 83.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 83.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 82.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 82.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 82.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 82.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 81.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 81.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 81.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 81.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 81.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 80.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 79.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 79.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 79.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 79.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 78.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 78.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 78.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 77.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 77.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 75.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 74.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 74.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 74.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 72.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 71.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 71.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 71.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 71.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 71.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 71.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 71.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 70.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 70.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 69.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 69.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 69.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 69.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 69.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 69.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 68.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 68.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 68.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 68.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 67.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 67.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 67.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 67.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 66.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 66.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 65.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 65.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 65.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 64.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 64.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 63.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 62.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 62.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 61.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 61.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 61.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 60.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 60.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 59.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 59.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 58.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 58.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 58.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 58.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 58.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 58.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 57.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 57.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 57.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 57.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 56.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 56.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 55.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 55.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 55.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 54.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 53.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 53.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 53.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 52.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 51.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 50.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 50.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 49.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 138.8
Samples: 246

Max nTPM: 270.4
Min nTPM: 46.7
Std nTPM: 47.8
Median nTPM: 140.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 270.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 257.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 245.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 238.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 227.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 226.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 225.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 222.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 222.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 222.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 221.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 220.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 219.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 218.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 217.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 216.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 215.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 214.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 212.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 209.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 206.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 206.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 206.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 203.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 202.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 200.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 200.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 199.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 195.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 195.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 193.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 192.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 191.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 191.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 190.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 190.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 189.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 187.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 186.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 186.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 186.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 186.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 185.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 184.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 184.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 183.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 183.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 183.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 183.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 183.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 182.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 182.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 181.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 181.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 181.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 180.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 180.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 178.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 177.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 175.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 175.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 174.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 173.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 173.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 171.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 171.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 170.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 170.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 170.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 166.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 165.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 165.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 163.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 161.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 161.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 160.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 160.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 160.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 160.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 159.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 159.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 158.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 158.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 157.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 157.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 157.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 157.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 156.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 155.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 154.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 154.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 153.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 153.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 153.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 153.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 153.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 153.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 152.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 152.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 151.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 151.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 150.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 150.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 150.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 149.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 149.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 149.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 149.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 148.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 148.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 148.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 147.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 146.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 146.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 144.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 144.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 144.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 143.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 142.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 141.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 141.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 140.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 140.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 139.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 139.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 138.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 137.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 137.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 137.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 137.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 137.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 136.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 136.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 135.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 135.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 135.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 135.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 134.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 133.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 133.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 132.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 131.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 130.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 129.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 128.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 127.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 126.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 126.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 125.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 125.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 125.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 125.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 125.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 123.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 122.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 121.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 121.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 121.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 120.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 119.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 119.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 119.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 119.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 118.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 117.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 117.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 117.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 117.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 117.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 116.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 114.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 113.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 113.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 110.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 110.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 110.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 108.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 108.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 106.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 105.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 103.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 102.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 100.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 100.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 100.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 99.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 99.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 99.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 97.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 96.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 94.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 94.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 93.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 92.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 90.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 89.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 89.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 88.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 88.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 88.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 87.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 86.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 86.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 85.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 84.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 84.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 84.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 84.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 83.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 83.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 82.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 81.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 81.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 80.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 77.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 76.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 74.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 74.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 74.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 74.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 73.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 70.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 69.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 68.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 68.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 68.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 67.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 66.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 66.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 65.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 65.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 64.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 63.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 63.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 62.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 61.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 61.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 59.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 58.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 56.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 54.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 53.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 49.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 48.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 47.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 46.7
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Brain - Putamen (basal ganglia)
Average nTPM: 88.0
Samples: 205

Max nTPM: 161.9
Min nTPM: 41.2
Std nTPM: 27.6
Median nTPM: 85.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 161.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 157.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 150.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 149.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 143.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 142.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 141.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 139.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 139.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 139.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 137.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 137.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 134.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 134.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 132.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 132.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 131.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 130.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 127.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 127.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 127.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 126.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 126.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 125.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 124.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 124.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 123.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 123.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 122.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 122.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 121.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 120.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 120.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 120.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 119.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 118.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 117.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 117.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 116.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 115.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 114.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 114.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 114.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 114.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 114.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 113.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 112.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 111.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 111.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 110.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 109.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 108.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 108.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 107.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 107.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 106.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 105.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 104.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 104.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 104.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 104.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 102.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 102.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 101.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 101.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 100.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 99.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 99.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 98.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 97.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 96.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 95.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 95.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 95.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 95.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 95.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 94.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 94.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 94.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 93.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 91.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 91.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 91.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 90.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 90.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 89.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 89.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 89.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 89.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 89.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 89.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 88.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 88.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 88.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 87.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 87.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 87.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 86.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 86.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 86.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 85.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 85.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 85.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 84.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 83.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 82.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 82.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 81.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 81.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 81.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 80.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 80.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 80.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 79.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 78.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 77.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 77.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 76.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 76.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 76.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 75.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 75.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 75.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 75.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 75.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 75.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 74.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 74.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 74.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 74.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 73.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 73.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 72.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 72.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 71.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 71.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 71.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 70.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 70.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 69.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 69.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 69.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 69.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 68.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 68.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 68.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 68.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 68.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 67.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 67.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 67.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 67.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 67.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 66.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 66.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 65.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 65.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 64.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 64.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 63.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 63.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 63.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 63.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 63.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 62.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 61.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 61.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 61.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 60.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 60.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 59.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 59.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 59.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 58.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 58.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 58.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 57.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 57.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 57.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 57.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 57.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 57.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 56.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 55.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 55.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 54.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 53.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 53.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 51.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 50.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 50.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 49.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 49.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 49.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 49.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 47.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 47.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 46.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 46.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 46.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 45.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 44.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 44.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 44.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 41.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

389.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 301.1
FF:10164-103B2 76 years, female 301.1
Nucleus accumbens
Scaled Tags Per Million: 355.8
FF:10037-101F1 23-56 years, mixed 355.8
Putamen
Scaled Tags Per Million: 389.0
FF:10176-103C5 60 years, female 389.0
Globus pallidus
Scaled Tags Per Million: 122.2
FF:10175-103C4 60 years, female 161.6
FF:10161-103A8 76 years, female 82.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.0
Pig sample Sample description nTPM
Caudate
nTPM: 71.0
Samples: 4

Max nTPM: 80.3
Min nTPM: 60.6
Sample A Female 60.6
Sample B Female 76.8
Sample C Male 80.3
Sample D Male 66.4
Putamen
nTPM: 64.5
Samples: 4

Max nTPM: 80.8
Min nTPM: 49.9
Sample A Female 49.9
Sample B Female 57.3
Sample C Male 80.8
Sample D Male 70.0
Septum
nTPM: 80.1
Samples: 4

Max nTPM: 118.8
Min nTPM: 63.1
Sample A Female 74.5
Sample B Female 63.8
Sample C Male 118.8
Sample D Male 63.1
Ventral pallidum
nTPM: 67.8
Samples: 4

Max nTPM: 89.6
Min nTPM: 58.2
Sample A Female 62.0
Sample B Female 61.5
Sample C Male 89.6
Sample D Male 58.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 88.2
Samples: 4

Max nTPM: 93.4
Min nTPM: 80.2
Sample A Male 92.2
Sample B Male 87.1
Sample C Female 80.2
Sample D Female 93.4
Septum
nTPM: 118.3
Samples: 4

Max nTPM: 138.8
Min nTPM: 106.9
Sample A Male 138.8
Sample B Male 112.4
Sample C Female 106.9
Sample D Female 115.1
Ventral forebrain
nTPM: 98.7
Samples: 4

Max nTPM: 115.1
Min nTPM: 89.2
Sample A Male 89.2
Sample B Male 115.1
Sample C Female 92.6
Sample D Female 97.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 14.5
77620309 Antisense, RP_070205_01_A10, Mouse strain C57BL/6J (56 days, male) 15.1
355883 Antisense, RP_040617_01_F01, Mouse strain C57BL/6J (56 days, male) 13.8
293903 Antisense, RP_040617_01_F01, Mouse strain C57BL/6J (56 days, male) 13.5
77869130 Antisense, RP_070205_01_A10, Mouse strain C57BL/6J (56 days, male) 8.9
Pallidum
Expression energy: 15.7
77620309 Antisense, RP_070205_01_A10, Mouse strain C57BL/6J (56 days, male) 16.2
293903 Antisense, RP_040617_01_F01, Mouse strain C57BL/6J (56 days, male) 15.3
355883 Antisense, RP_040617_01_F01, Mouse strain C57BL/6J (56 days, male) 14.2
77869130 Antisense, RP_070205_01_A10, Mouse strain C57BL/6J (56 days, male) 9.9

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