We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
971.7
nTPM
FANTOM5:
1242.1
Scaled Tags Per Million
Pig:
633.9
nTPM
Allen mouse:
13.6
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
971.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 430.8
1984
Male, age 76, both hemispheres
682.4
2301
Female, age 85, both hemispheres
392.8
2188
Female, age 91, both hemispheres
343.7
2090
Male, age 80, both hemispheres
304.3
Dorsal cochlear nucleus nTPM: 341.7
2058
Male, age 76, both hemispheres
423.0
2370
Male, age 61, both hemispheres
349.1
2802
Male, age 74, right hemisphere
340.3
2187
Female, age 91, both hemispheres
299.5
2378
Male, age 80, both hemispheres
296.7
Dorsal tegmental nucleus nTPM: 290.9
1936
Male, age 76, left hemisphere
355.6
2083
Male, age 80, both hemispheres
331.4
2358
Male, age 61, both hemispheres
263.4
2326
Male, age 74, both hemispheres
213.4
Dorsolateral tegmental area nTPM: 273.7
2751
Female, age 85, both hemispheres
375.6
2141
Male, age 76, both hemispheres
356.3
2654
Male, age 80, both hemispheres
291.8
2360
Male, age 74, both hemispheres
240.4
2337
Male, age 61, both hemispheres
104.1
Kolliker-Fuse nucleus nTPM: 374.0
2793
Female, age 91, left hemisphere
422.1
2163
Male, age 80, both hemispheres
405.8
2315
Male, age 76, right hemisphere
293.9
Lateral lemniscal nuclei nTPM: 796.5
2036
Male, age 80, both hemispheres
1067.4
2169
Male, age 76, both hemispheres
880.0
2746
Female, age 85, left hemisphere
764.7
2453
Male, age 74, right hemisphere
758.7
2320
Female, age 91, left hemisphere
511.8
Lateral parabrachial nucleus nTPM: 493.2
2139
Female, age 85, right hemisphere
896.9
2013
Male, age 80, both hemispheres
504.7
2790
Male, age 61, both hemispheres
395.9
2792
Male, age 76, both hemispheres
175.4
Lateral vestibular nucleus nTPM: 377.3
2184
Male, age 76, both hemispheres
516.9
2311
Male, age 80, both hemispheres
237.7
Locus coeruleus nTPM: 498.9
2123
Female, age 91, both hemispheres
811.7
2014
Male, age 55, unknown
559.9
2720
Male, age 74, both hemispheres
465.2
1980
Male, age 76, both hemispheres
461.3
2317
Female, age 72, unknown
433.5
2162
Male, age 80, both hemispheres
405.1
2788
Male, age 74, unknown
355.3
Medial parabrachial nucleus nTPM: 403.1
2854
Male, age 80, both hemispheres
546.4
2463
Female, age 85, right hemisphere
452.4
2156
Male, age 61, both hemispheres
371.9
2786
Male, age 76, both hemispheres
356.5
2170
Female, age 91, both hemispheres
288.3
Medial periolivary nuclei nTPM: 720.2
2171
Female, age 85, both hemispheres
1171.1
2063
Male, age 76, both hemispheres
954.9
2791
Male, age 74, right hemisphere
583.7
2081
Male, age 80, both hemispheres
473.7
2458
Female, age 91, both hemispheres
417.9
Motor facial nucleus nTPM: 705.9
2062
Male, age 76, both hemispheres
1049.0
2327
Male, age 80, both hemispheres
824.9
2365
Male, age 74, right hemisphere
704.2
2697
Female, age 85, both hemispheres
623.4
2795
Female, age 91, both hemispheres
522.5
2126
Male, age 61, both hemispheres
511.7
Motor trigeminal nucleus nTPM: 470.0
2079
Male, age 80, both hemispheres
855.6
2560
Male, age 74, both hemispheres
531.6
2321
Female, age 91, both hemispheres
350.7
2335
Male, age 61, both hemispheres
328.8
2309
Male, age 76, both hemispheres
283.5
Nuclei of the trapezoid body nTPM: 971.7
2159
Male, age 61, both hemispheres
1444.4
2735
Female, age 85, both hemispheres
1257.3
1983
Male, age 76, both hemispheres
894.5
2166
Male, age 80, both hemispheres
728.0
2368
Female, age 91, both hemispheres
534.3
Nucleus raphe magnus nTPM: 970.8
2160
Male, age 61, both hemispheres
1608.3
2172
Female, age 85, both hemispheres
1251.0
2455
Male, age 74, both hemispheres
977.8
2328
Male, age 80, both hemispheres
780.3
2051
Male, age 76, both hemispheres
675.3
2459
Female, age 91, both hemispheres
532.2
Paramedian reticular nucleus nTPM: 498.4
2050
Female, age 85, both hemispheres
889.0
2313
Male, age 61, both hemispheres
464.3
2057
Male, age 80, both hemispheres
420.6
2052
Male, age 76, both hemispheres
219.8
Pedunculopontine tegmental nucleus nTPM: 320.6
1921
Female, age 85, both hemispheres
396.9
2334
Male, age 80, both hemispheres
292.5
2338
Male, age 61, both hemispheres
272.3
Pontine nuclei nTPM: 888.5
2787
Female, age 85, both hemispheres
1402.0
2727
Male, age 61, right hemisphere
1350.3
1863
Male, age 55, unknown
1145.8
2109
Female, age 72, unknown
869.2
1968
Male, age 76, left hemisphere
846.2
2115
Male, age 80, left hemisphere
586.6
2454
Male, age 74, left hemisphere
520.4
2319
Female, age 91, both hemispheres
387.1
Pontine raphe nucleus nTPM: 584.7
2122
Female, age 85, midline
835.3
2853
Male, age 76, midline
334.1
Posteroventral cochlear nucleus nTPM: 321.0
2752
Female, age 85, both hemispheres
524.1
2070
Male, age 76, both hemispheres
362.7
2371
Male, age 61, both hemispheres
359.8
2341
Male, age 80, both hemispheres
285.1
2135
Female, age 91, both hemispheres
73.2
Principal sensory trigeminal nucleus nTPM: 831.7
2158
Male, age 61, both hemispheres
1474.5
2008
Male, age 80, left hemisphere
1036.3
2324
Male, age 76, both hemispheres
418.1
2367
Female, age 91, left hemisphere
398.0
Reticular pontine nucleus, caudal nTPM: 553.9
2332
Male, age 80, right hemisphere
929.2
2092
Male, age 76, both hemispheres
654.8
2457
Female, age 91, both hemispheres
406.4
2559
Male, age 74, both hemispheres
225.3
Reticular pontine nucleus, oral nTPM: 519.7
2012
Female, age 85, both hemispheres
781.0
2361
Male, age 74, both hemispheres
698.8
1939
Male, age 80, both hemispheres
392.2
2167
Male, age 76, both hemispheres
367.0
2366
Female, age 91, both hemispheres
359.6
Reticulotegmental nucleus nTPM: 450.1
2325
Male, age 76, both hemispheres
583.7
2333
Male, age 80, both hemispheres
477.6
2452
Male, age 74, both hemispheres
410.6
2322
Female, age 91, both hemispheres
328.6
Spinal trigeminal nucleus, oral nTPM: 418.6
2737
Female, age 85, both hemispheres
528.6
2164
Male, age 80, both hemispheres
450.6
1978
Male, age 76, both hemispheres
276.7
Subcoeruleus area nTPM: 435.1
2089
Male, age 76, left hemisphere
692.7
1958
Male, age 80, both hemispheres
569.0
2323
Female, age 91, left hemisphere
385.9
2369
Female, age 85, left hemisphere
270.3
2451
Male, age 74, both hemispheres
257.6
Superior olive nTPM: 713.0
1875
Female, age 85, both hemispheres
1044.1
2329
Male, age 80, right hemisphere
696.0
2364
Male, age 74, right hemisphere
655.3
2020
Male, age 76, both hemispheres
616.2
2561
Female, age 91, both hemispheres
553.5
Ventral periolivary nuclei nTPM: 827.4
2130
Female, age 85, both hemispheres
1098.3
2165
Male, age 80, both hemispheres
1002.2
2794
Female, age 91, left hemisphere
674.2
2023
Male, age 76, both hemispheres
535.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 561.6
2449
Male, age 74, both hemispheres
803.4
1959
Male, age 76, both hemispheres
680.1
2161
Male, age 80, both hemispheres
659.4
2840
Female, age 85, both hemispheres
545.9
2456
Female, age 91, both hemispheres
377.9
2359
Male, age 61, both hemispheres
303.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
633.9
Pig sample
Sample description
nTPM
Pons nTPM: 633.9
Samples: 4
Max nTPM: 1234.7
Min nTPM: 349.6
Sample A
Female
1234.7
Sample B
Female
360.1
Sample C
Male
349.6
Sample D
Male
591.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
