PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:971.7 nTPM
FANTOM5:1242.1 Scaled Tags Per Million
Pig:633.9 nTPM
Mouse:834.8 nTPM
Allen mouse:16.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 971.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 430.8
1984 Male, age 76, both hemispheres 682.4
2301 Female, age 85, both hemispheres 392.8
2188 Female, age 91, both hemispheres 343.7
2090 Male, age 80, both hemispheres 304.3
Area postrema
nTPM: 174.0
2054 Male, age 76, both hemispheres 266.2
2799 Male, age 61, both hemispheres 143.4
2306 Male, age 80, both hemispheres 112.5
Dorsal cochlear nucleus
nTPM: 341.7
2058 Male, age 76, both hemispheres 423.0
2370 Male, age 61, both hemispheres 349.1
2802 Male, age 74, right hemisphere 340.3
2187 Female, age 91, both hemispheres 299.5
2378 Male, age 80, both hemispheres 296.7
Dorsal medullary reticular nucleus
nTPM: 368.7
2040 Female, age 85, both hemispheres 503.9
2088 Male, age 76, both hemispheres 353.8
2373 Male, age 61, both hemispheres 248.4
Dorsal motor vagal complex
nTPM: 305.9
2133 Female, age 91, both hemispheres 449.5
2000 Male, age 74, unknown 434.9
2844 Male, age 55, unknown 347.6
2185 Male, age 76, both hemispheres 308.9
2797 Male, age 61, both hemispheres 254.6
2813 Female, age 72, unknown 248.5
2643 Male, age 74, both hemispheres 239.0
2807 Female, age 85, both hemispheres 164.5
Dorsal tegmental nucleus
nTPM: 290.9
1936 Male, age 76, left hemisphere 355.6
2083 Male, age 80, both hemispheres 331.4
2358 Male, age 61, both hemispheres 263.4
2326 Male, age 74, both hemispheres 213.4
Dorsolateral tegmental area
nTPM: 273.7
2751 Female, age 85, both hemispheres 375.6
2141 Male, age 76, both hemispheres 356.3
2654 Male, age 80, both hemispheres 291.8
2360 Male, age 74, both hemispheres 240.4
2337 Male, age 61, both hemispheres 104.1
Gigantocellular reticular nuclei, medullary
nTPM: 455.9
2462 Male, age 74, both hemispheres 1030.1
2310 Male, age 80, both hemispheres 542.1
1876 Female, age 85, both hemispheres 355.7
2387 Female, age 91, both hemispheres 340.1
2022 Male, age 76, right hemisphere 266.0
2314 Male, age 61, both hemispheres 201.4
Gigantocellular reticular nuclei, pars
nTPM: 528.1
2168 Male, age 76, both hemispheres 910.9
2706 Male, age 80, both hemispheres 485.0
2330 Male, age 80, both hemispheres 479.6
2084 Female, age 85, both hemispheres 438.9
2336 Male, age 61, both hemispheres 326.1
Inferior olive
nTPM: 210.9
2085 Female, age 85, both hemispheres 311.0
2628 Female, age 91, both hemispheres 260.1
2563 Male, age 74, both hemispheres 191.2
2379 Male, age 80, both hemispheres 149.6
2178 Male, age 61, both hemispheres 142.5
Kolliker-Fuse nucleus
nTPM: 374.0
2793 Female, age 91, left hemisphere 422.1
2163 Male, age 80, both hemispheres 405.8
2315 Male, age 76, right hemisphere 293.9
Lateral lemniscal nuclei
nTPM: 796.5
2036 Male, age 80, both hemispheres 1067.4
2169 Male, age 76, both hemispheres 880.0
2746 Female, age 85, left hemisphere 764.7
2453 Male, age 74, right hemisphere 758.7
2320 Female, age 91, left hemisphere 511.8
Lateral medullary reticular nucleus
nTPM: 306.3
2044 Male, age 76, both hemispheres 653.2
2804 Female, age 91, both hemispheres 291.6
2190 Female, age 85, both hemispheres 265.7
2305 Male, age 74, both hemispheres 239.1
2374 Male, age 61, both hemispheres 215.1
2852 Male, age 80, both hemispheres 173.2
Lateral parabrachial nucleus
nTPM: 493.2
2139 Female, age 85, right hemisphere 896.9
2013 Male, age 80, both hemispheres 504.7
2790 Male, age 61, both hemispheres 395.9
2792 Male, age 76, both hemispheres 175.4
Lateral vestibular nucleus
nTPM: 377.3
2184 Male, age 76, both hemispheres 516.9
2311 Male, age 80, both hemispheres 237.7
Locus coeruleus
nTPM: 498.9
2123 Female, age 91, both hemispheres 811.7
2014 Male, age 55, unknown 559.9
2720 Male, age 74, both hemispheres 465.2
1980 Male, age 76, both hemispheres 461.3
2317 Female, age 72, unknown 433.5
2162 Male, age 80, both hemispheres 405.1
2788 Male, age 74, unknown 355.3
Medial olivary nucleus
nTPM: 149.4
2851 Male, age 80, both hemispheres 235.5
1962 Male, age 76, both hemispheres 154.3
2138 Female, age 91, both hemispheres 139.7
1943 Male, age 61, both hemispheres 68.3
Medial parabrachial nucleus
nTPM: 403.1
2854 Male, age 80, both hemispheres 546.4
2463 Female, age 85, right hemisphere 452.4
2156 Male, age 61, both hemispheres 371.9
2786 Male, age 76, both hemispheres 356.5
2170 Female, age 91, both hemispheres 288.3
Medial periolivary nuclei
nTPM: 720.2
2171 Female, age 85, both hemispheres 1171.1
2063 Male, age 76, both hemispheres 954.9
2791 Male, age 74, right hemisphere 583.7
2081 Male, age 80, both hemispheres 473.7
2458 Female, age 91, both hemispheres 417.9
Medial vestibular nucleus
nTPM: 521.2
2743 Female, age 85, both hemispheres 656.4
2624 Male, age 61, both hemispheres 572.8
2134 Male, age 76, both hemispheres 544.5
2093 Male, age 80, both hemispheres 523.4
2801 Male, age 74, both hemispheres 417.9
2803 Female, age 91, both hemispheres 412.0
Motor facial nucleus
nTPM: 705.9
2062 Male, age 76, both hemispheres 1049.0
2327 Male, age 80, both hemispheres 824.9
2365 Male, age 74, right hemisphere 704.2
2697 Female, age 85, both hemispheres 623.4
2795 Female, age 91, both hemispheres 522.5
2126 Male, age 61, both hemispheres 511.7
Motor hypoglossal nucleus
nTPM: 349.6
2125 Female, age 91, both hemispheres 531.3
2132 Female, age 85, both hemispheres 371.6
2461 Male, age 61, both hemispheres 350.3
2182 Male, age 80, both hemispheres 267.2
2277 Male, age 76, both hemispheres 227.8
Motor trigeminal nucleus
nTPM: 470.0
2079 Male, age 80, both hemispheres 855.6
2560 Male, age 74, both hemispheres 531.6
2321 Female, age 91, both hemispheres 350.7
2335 Male, age 61, both hemispheres 328.8
2309 Male, age 76, both hemispheres 283.5
Nuclei of the trapezoid body
nTPM: 971.7
2159 Male, age 61, both hemispheres 1444.4
2735 Female, age 85, both hemispheres 1257.3
1983 Male, age 76, both hemispheres 894.5
2166 Male, age 80, both hemispheres 728.0
2368 Female, age 91, both hemispheres 534.3
Nucleus ambiguus
nTPM: 303.6
2096 Female, age 85, both hemispheres 440.9
2071 Male, age 76, both hemispheres 166.3
Nucleus cuneatus
nTPM: 366.8
2131 Male, age 76, both hemispheres 788.1
2100 Male, age 76, both hemispheres 596.9
2376 Male, age 61, both hemispheres 512.2
2564 Male, age 74, both hemispheres 398.0
2562 Male, age 61, both hemispheres 340.5
2381 Male, age 80, both hemispheres 197.8
2805 Female, age 91, both hemispheres 173.0
2808 Female, age 85, both hemispheres 158.2
2380 Male, age 80, both hemispheres 136.7
Nucleus gracilis
nTPM: 157.1
2627 Male, age 74, both hemispheres 251.6
2299 Female, age 85, both hemispheres 125.6
2382 Male, age 80, both hemispheres 94.2
Nucleus raphe magnus
nTPM: 970.8
2160 Male, age 61, both hemispheres 1608.3
2172 Female, age 85, both hemispheres 1251.0
2455 Male, age 74, both hemispheres 977.8
2328 Male, age 80, both hemispheres 780.3
2051 Male, age 76, both hemispheres 675.3
2459 Female, age 91, both hemispheres 532.2
Nucleus raphe obscurus
nTPM: 212.0
2800 Male, age 61, midline 295.7
2845 Female, age 85, midline 262.2
2142 Male, age 76, midline 78.0
Nucleus raphe pallidus
nTPM: 276.1
2183 Male, age 80, midline 385.6
1924 Male, age 61, midline 350.1
2145 Male, age 76, midline 92.7
Nucleus tractus solitarii
nTPM: 291.3
2144 Female, age 91, right hemisphere 438.4
2656 Male, age 76, both hemispheres 292.3
2191 Female, age 85, both hemispheres 228.0
2307 Male, age 80, both hemispheres 206.3
Paramedian reticular nucleus
nTPM: 498.4
2050 Female, age 85, both hemispheres 889.0
2313 Male, age 61, both hemispheres 464.3
2057 Male, age 80, both hemispheres 420.6
2052 Male, age 76, both hemispheres 219.8
Parvicellular reticular nuclei
nTPM: 535.5
2558 Male, age 74, both hemispheres 785.0
2095 Male, age 76, both hemispheres 438.9
2119 Male, age 80, both hemispheres 382.6
Parvicellular reticular nuclei, medullary
nTPM: 370.4
2091 Female, age 85, both hemispheres 421.7
2189 Female, age 91, both hemispheres 407.9
2181 Male, age 80, left hemisphere 281.4
Pedunculopontine tegmental nucleus
nTPM: 320.6
1921 Female, age 85, both hemispheres 396.9
2334 Male, age 80, both hemispheres 292.5
2338 Male, age 61, both hemispheres 272.3
Peritrigeminal nucleus
nTPM: 560.4
2179 Male, age 61, both hemispheres 693.7
2136 Male, age 76, both hemispheres 495.2
2067 Female, age 85, both hemispheres 492.3
Pontine nuclei
nTPM: 888.5
2787 Female, age 85, both hemispheres 1402.0
2727 Male, age 61, right hemisphere 1350.3
1863 Male, age 55, unknown 1145.8
2109 Female, age 72, unknown 869.2
1968 Male, age 76, left hemisphere 846.2
2115 Male, age 80, left hemisphere 586.6
2454 Male, age 74, left hemisphere 520.4
2319 Female, age 91, both hemispheres 387.1
Pontine raphe nucleus
nTPM: 584.7
2122 Female, age 85, midline 835.3
2853 Male, age 76, midline 334.1
Posteroventral cochlear nucleus
nTPM: 321.0
2752 Female, age 85, both hemispheres 524.1
2070 Male, age 76, both hemispheres 362.7
2371 Male, age 61, both hemispheres 359.8
2341 Male, age 80, both hemispheres 285.1
2135 Female, age 91, both hemispheres 73.2
Prepositus hypoglossal nucleus
nTPM: 499.3
2855 Female, age 85, right hemisphere 518.0
2086 Male, age 80, both hemispheres 480.5
Principal sensory trigeminal nucleus
nTPM: 831.7
2158 Male, age 61, both hemispheres 1474.5
2008 Male, age 80, left hemisphere 1036.3
2324 Male, age 76, both hemispheres 418.1
2367 Female, age 91, left hemisphere 398.0
Reticular pontine nucleus, caudal
nTPM: 553.9
2332 Male, age 80, right hemisphere 929.2
2092 Male, age 76, both hemispheres 654.8
2457 Female, age 91, both hemispheres 406.4
2559 Male, age 74, both hemispheres 225.3
Reticular pontine nucleus, oral
nTPM: 519.7
2012 Female, age 85, both hemispheres 781.0
2361 Male, age 74, both hemispheres 698.8
1939 Male, age 80, both hemispheres 392.2
2167 Male, age 76, both hemispheres 367.0
2366 Female, age 91, both hemispheres 359.6
Reticulotegmental nucleus
nTPM: 450.1
2325 Male, age 76, both hemispheres 583.7
2333 Male, age 80, both hemispheres 477.6
2452 Male, age 74, both hemispheres 410.6
2322 Female, age 91, both hemispheres 328.6
Spinal trigeminal nucleus, caudal
nTPM: 395.8
2447 Male, age 76, both hemispheres 654.9
2390 Female, age 91, both hemispheres 540.6
2312 Male, age 61, both hemispheres 274.6
2642 Male, age 74, both hemispheres 270.2
2308 Male, age 80, both hemispheres 238.5
Spinal trigeminal nucleus, interpolar
nTPM: 577.0
2066 Male, age 76, right hemisphere 843.3
2625 Male, age 61, both hemispheres 728.3
2389 Female, age 91, both hemispheres 550.8
2033 Male, age 80, both hemispheres 398.9
2386 Female, age 85, both hemispheres 363.7
Spinal trigeminal nucleus, oral
nTPM: 418.6
2737 Female, age 85, both hemispheres 528.6
2164 Male, age 80, both hemispheres 450.6
1978 Male, age 76, both hemispheres 276.7
Spinal vestibular nucleus
nTPM: 329.1
2186 Female, age 91, both hemispheres 420.6
2780 Male, age 80, both hemispheres 364.6
2796 Male, age 61, both hemispheres 337.4
2806 Female, age 85, both hemispheres 329.3
2748 Male, age 76, both hemispheres 301.3
2384 Male, age 74, both hemispheres 221.3
Subcoeruleus area
nTPM: 435.1
2089 Male, age 76, left hemisphere 692.7
1958 Male, age 80, both hemispheres 569.0
2323 Female, age 91, left hemisphere 385.9
2369 Female, age 85, left hemisphere 270.3
2451 Male, age 74, both hemispheres 257.6
Superior olive
nTPM: 713.0
1875 Female, age 85, both hemispheres 1044.1
2329 Male, age 80, right hemisphere 696.0
2364 Male, age 74, right hemisphere 655.3
2020 Male, age 76, both hemispheres 616.2
2561 Female, age 91, both hemispheres 553.5
Superior vestibular nucleus
nTPM: 304.2
2061 Male, age 76, both hemispheres 358.3
2015 Male, age 80, both hemispheres 323.9
2383 Male, age 74, both hemispheres 230.6
Ventral medullary reticular nucleus
nTPM: 278.7
2372 Male, age 61, both hemispheres 290.9
2060 Male, age 76, both hemispheres 266.5
Ventral periolivary nuclei
nTPM: 827.4
2130 Female, age 85, both hemispheres 1098.3
2165 Male, age 80, both hemispheres 1002.2
2794 Female, age 91, left hemisphere 674.2
2023 Male, age 76, both hemispheres 535.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 431.2
2741 Female, age 85, both hemispheres 582.0
1986 Male, age 76, both hemispheres 571.9
2302 Female, age 91, both hemispheres 409.2
2180 Male, age 61, both hemispheres 330.8
2118 Male, age 80, both hemispheres 262.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 561.6
2449 Male, age 74, both hemispheres 803.4
1959 Male, age 76, both hemispheres 680.1
2161 Male, age 80, both hemispheres 659.4
2840 Female, age 85, both hemispheres 545.9
2456 Female, age 91, both hemispheres 377.9
2359 Male, age 61, both hemispheres 303.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1242.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 446.3
FF:10182-103D2 60 years, female 624.7
FF:10165-103B3 76 years, female 267.9
Medulla oblongata
Scaled Tags Per Million: 315.4
FF:10038-101F2 18-64 years, mixed 453.8
FF:10174-103C3 60 years, female 275.8
FF:10155-103A2 76 years, female 216.6
Pons
Scaled Tags Per Million: 1242.1
FF:10033-101E6 18-54 years, mixed 1242.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 633.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 353.4
Samples: 4

Max nTPM: 410.4
Min nTPM: 278.5
Sample A Female 336.5
Sample B Female 410.4
Sample C Male 388.3
Sample D Male 278.5
Pons
nTPM: 633.9
Samples: 4

Max nTPM: 1234.7
Min nTPM: 349.6
Sample A Female 1234.7
Sample B Female 360.1
Sample C Male 349.6
Sample D Male 591.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 834.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 834.9
Samples: 4

Max nTPM: 863.3
Min nTPM: 806.6
Sample A Male 827.0
Sample B Male 863.3
Sample C Female 842.5
Sample D Female 806.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 16.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 16.8
69782109 Antisense, RP_050505_02_D01, Mouse strain C57BL/6J (56 days, male) 16.8
Pons
Expression energy: 13.6
69782109 Antisense, RP_050505_02_D01, Mouse strain C57BL/6J (56 days, male) 13.6

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