PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		59.149
Mouse brain, Intensity
Ponsi 		115.361
RNA expressioni
HPA Brain:112.0 nTPM
FANTOM5:166.0 Scaled Tags Per Million
Pig:130.6 nTPM
Mouse:43.9 nTPM
Allen mouse:6.3 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA017960
Medulla oblongata mean intensity 59.149
intensityi
FRONT BACK
Nucleus of the solitary tract 28.274
Raphe magnus nucleus 17.324
Cochlear nucleus 30.401
Lateral paragigantocellular nucleus 8.984
Raphe pallidus nucleus 42.879
Facial nucleus 27.056
Hypoglossal nucleus 51.470
Ambiguus nucleus 51.282
External cuneate nucleus 17.871
Inferior olivary nucleus 13.045
Raphe obscures nucleus 12.724
Dorsal motor nucleus of vagus 32.178
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 55.601
Parabrachial nucleus 70.011
Principle sensory trigeminal nucleus 15.604
Locus coeruleus 115.361
Pontine nucleus 17.466
Vestibular nucleus 13.986
Pontine reticular nucleus, oral 16.220
Lateral lemniscus 10.268
Superior paraolivary nucleus 8.429

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 112.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 102.7
2301 Female, age 85, both hemispheres 124.4
2188 Female, age 91, both hemispheres 103.7
2090 Male, age 80, both hemispheres 96.8
1984 Male, age 76, both hemispheres 86.0
Area postrema
nTPM: 90.9
2054 Male, age 76, both hemispheres 95.0
2306 Male, age 80, both hemispheres 93.7
2799 Male, age 61, both hemispheres 83.9
Dorsal cochlear nucleus
nTPM: 88.5
2187 Female, age 91, both hemispheres 104.3
2802 Male, age 74, right hemisphere 99.1
2058 Male, age 76, both hemispheres 85.5
2378 Male, age 80, both hemispheres 79.6
2370 Male, age 61, both hemispheres 73.9
Dorsal medullary reticular nucleus
nTPM: 86.1
2088 Male, age 76, both hemispheres 94.2
2040 Female, age 85, both hemispheres 84.0
2373 Male, age 61, both hemispheres 80.0
Dorsal motor vagal complex
nTPM: 81.9
2185 Male, age 76, both hemispheres 120.6
2643 Male, age 74, both hemispheres 89.4
2844 Male, age 55, unknown 81.7
2000 Male, age 74, unknown 77.6
2797 Male, age 61, both hemispheres 75.4
2133 Female, age 91, both hemispheres 74.9
2813 Female, age 72, unknown 69.9
2807 Female, age 85, both hemispheres 65.6
Dorsal tegmental nucleus
nTPM: 80.5
2326 Male, age 74, both hemispheres 89.8
2083 Male, age 80, both hemispheres 85.9
1936 Male, age 76, left hemisphere 76.4
2358 Male, age 61, both hemispheres 70.1
Dorsolateral tegmental area
nTPM: 82.4
2751 Female, age 85, both hemispheres 98.3
2360 Male, age 74, both hemispheres 89.1
2654 Male, age 80, both hemispheres 82.8
2337 Male, age 61, both hemispheres 73.6
2141 Male, age 76, both hemispheres 68.3
Gigantocellular reticular nuclei, medullary
nTPM: 86.6
2314 Male, age 61, both hemispheres 113.1
2387 Female, age 91, both hemispheres 95.6
1876 Female, age 85, both hemispheres 85.2
2310 Male, age 80, both hemispheres 80.0
2022 Male, age 76, right hemisphere 79.4
2462 Male, age 74, both hemispheres 66.4
Gigantocellular reticular nuclei, pars
nTPM: 80.7
2336 Male, age 61, both hemispheres 91.7
2706 Male, age 80, both hemispheres 84.6
2330 Male, age 80, both hemispheres 84.2
2084 Female, age 85, both hemispheres 72.9
2168 Male, age 76, both hemispheres 70.2
Inferior olive
nTPM: 99.9
2085 Female, age 85, both hemispheres 108.8
2563 Male, age 74, both hemispheres 102.2
2628 Female, age 91, both hemispheres 100.9
2178 Male, age 61, both hemispheres 100.6
2379 Male, age 80, both hemispheres 86.8
Kolliker-Fuse nucleus
nTPM: 86.1
2793 Female, age 91, left hemisphere 114.7
2163 Male, age 80, both hemispheres 81.6
2315 Male, age 76, right hemisphere 62.1
Lateral lemniscal nuclei
nTPM: 86.5
2320 Female, age 91, left hemisphere 98.4
2453 Male, age 74, right hemisphere 86.5
2036 Male, age 80, both hemispheres 85.6
2746 Female, age 85, left hemisphere 84.7
2169 Male, age 76, both hemispheres 77.2
Lateral medullary reticular nucleus
nTPM: 97.2
2305 Male, age 74, both hemispheres 107.2
2374 Male, age 61, both hemispheres 106.5
2852 Male, age 80, both hemispheres 104.8
2190 Female, age 85, both hemispheres 96.0
2804 Female, age 91, both hemispheres 86.9
2044 Male, age 76, both hemispheres 81.7
Lateral parabrachial nucleus
nTPM: 80.4
2792 Male, age 76, both hemispheres 91.6
2013 Male, age 80, both hemispheres 83.9
2790 Male, age 61, both hemispheres 76.6
2139 Female, age 85, right hemisphere 69.5
Lateral vestibular nucleus
nTPM: 92.5
2184 Male, age 76, both hemispheres 93.2
2311 Male, age 80, both hemispheres 91.7
Locus coeruleus
nTPM: 64.2
2720 Male, age 74, both hemispheres 78.0
1980 Male, age 76, both hemispheres 67.0
2123 Female, age 91, both hemispheres 64.7
2317 Female, age 72, unknown 60.6
2014 Male, age 55, unknown 60.3
2162 Male, age 80, both hemispheres 60.3
2788 Male, age 74, unknown 58.1
Medial olivary nucleus
nTPM: 95.4
1943 Male, age 61, both hemispheres 100.8
1962 Male, age 76, both hemispheres 98.4
2851 Male, age 80, both hemispheres 91.8
2138 Female, age 91, both hemispheres 90.5
Medial parabrachial nucleus
nTPM: 92.5
2170 Female, age 91, both hemispheres 113.8
2463 Female, age 85, right hemisphere 98.2
2854 Male, age 80, both hemispheres 91.1
2786 Male, age 76, both hemispheres 85.2
2156 Male, age 61, both hemispheres 74.4
Medial periolivary nuclei
nTPM: 81.5
2458 Female, age 91, both hemispheres 95.1
2081 Male, age 80, both hemispheres 90.6
2791 Male, age 74, right hemisphere 82.8
2171 Female, age 85, both hemispheres 72.7
2063 Male, age 76, both hemispheres 66.0
Medial vestibular nucleus
nTPM: 87.3
2801 Male, age 74, both hemispheres 110.5
2803 Female, age 91, both hemispheres 89.8
2624 Male, age 61, both hemispheres 86.5
2093 Male, age 80, both hemispheres 81.7
2743 Female, age 85, both hemispheres 78.3
2134 Male, age 76, both hemispheres 76.7
Motor facial nucleus
nTPM: 81.9
2365 Male, age 74, right hemisphere 90.2
2126 Male, age 61, both hemispheres 89.6
2697 Female, age 85, both hemispheres 87.6
2795 Female, age 91, both hemispheres 81.5
2327 Male, age 80, both hemispheres 76.1
2062 Male, age 76, both hemispheres 66.5
Motor hypoglossal nucleus
nTPM: 84.4
2182 Male, age 80, both hemispheres 97.1
2125 Female, age 91, both hemispheres 95.7
2132 Female, age 85, both hemispheres 80.0
2277 Male, age 76, both hemispheres 76.0
2461 Male, age 61, both hemispheres 73.3
Motor trigeminal nucleus
nTPM: 85.0
2321 Female, age 91, both hemispheres 104.9
2560 Male, age 74, both hemispheres 98.4
2309 Male, age 76, both hemispheres 81.0
2079 Male, age 80, both hemispheres 74.6
2335 Male, age 61, both hemispheres 66.3
Nuclei of the trapezoid body
nTPM: 74.8
2368 Female, age 91, both hemispheres 87.2
2166 Male, age 80, both hemispheres 86.1
2159 Male, age 61, both hemispheres 68.9
2735 Female, age 85, both hemispheres 66.2
1983 Male, age 76, both hemispheres 65.6
Nucleus ambiguus
nTPM: 85.5
2071 Male, age 76, both hemispheres 96.6
2096 Female, age 85, both hemispheres 74.3
Nucleus cuneatus
nTPM: 100.8
2100 Male, age 76, both hemispheres 124.0
2380 Male, age 80, both hemispheres 109.4
2564 Male, age 74, both hemispheres 105.1
2808 Female, age 85, both hemispheres 104.6
2131 Male, age 76, both hemispheres 101.2
2805 Female, age 91, both hemispheres 99.2
2381 Male, age 80, both hemispheres 97.5
2376 Male, age 61, both hemispheres 92.4
2562 Male, age 61, both hemispheres 73.3
Nucleus gracilis
nTPM: 111.7
2627 Male, age 74, both hemispheres 115.7
2382 Male, age 80, both hemispheres 111.0
2299 Female, age 85, both hemispheres 108.5
Nucleus raphe magnus
nTPM: 75.1
2459 Female, age 91, both hemispheres 94.4
2328 Male, age 80, both hemispheres 81.5
2051 Male, age 76, both hemispheres 81.4
2455 Male, age 74, both hemispheres 77.5
2172 Female, age 85, both hemispheres 65.0
2160 Male, age 61, both hemispheres 51.2
Nucleus raphe obscurus
nTPM: 112.0
2845 Female, age 85, midline 130.7
2800 Male, age 61, midline 106.6
2142 Male, age 76, midline 98.8
Nucleus raphe pallidus
nTPM: 92.0
2145 Male, age 76, midline 115.1
2183 Male, age 80, midline 86.6
1924 Male, age 61, midline 74.2
Nucleus tractus solitarii
nTPM: 66.1
2191 Female, age 85, both hemispheres 81.2
2656 Male, age 76, both hemispheres 76.6
2307 Male, age 80, both hemispheres 58.1
2144 Female, age 91, right hemisphere 48.5
Paramedian reticular nucleus
nTPM: 74.8
2057 Male, age 80, both hemispheres 80.6
2050 Female, age 85, both hemispheres 79.9
2052 Male, age 76, both hemispheres 73.9
2313 Male, age 61, both hemispheres 64.9
Parvicellular reticular nuclei
nTPM: 86.5
2119 Male, age 80, both hemispheres 89.7
2095 Male, age 76, both hemispheres 86.0
2558 Male, age 74, both hemispheres 83.8
Parvicellular reticular nuclei, medullary
nTPM: 77.8
2189 Female, age 91, both hemispheres 86.7
2091 Female, age 85, both hemispheres 79.1
2181 Male, age 80, left hemisphere 67.6
Pedunculopontine tegmental nucleus
nTPM: 70.7
2334 Male, age 80, both hemispheres 73.8
1921 Female, age 85, both hemispheres 72.4
2338 Male, age 61, both hemispheres 65.7
Peritrigeminal nucleus
nTPM: 80.5
2067 Female, age 85, both hemispheres 83.8
2136 Male, age 76, both hemispheres 82.9
2179 Male, age 61, both hemispheres 74.8
Pontine nuclei
nTPM: 86.0
2454 Male, age 74, left hemisphere 105.7
2319 Female, age 91, both hemispheres 101.9
2109 Female, age 72, unknown 92.7
1863 Male, age 55, unknown 92.2
2115 Male, age 80, left hemisphere 88.5
1968 Male, age 76, left hemisphere 75.0
2787 Female, age 85, both hemispheres 74.3
2727 Male, age 61, right hemisphere 57.5
Pontine raphe nucleus
nTPM: 68.4
2853 Male, age 76, midline 69.1
2122 Female, age 85, midline 67.7
Posteroventral cochlear nucleus
nTPM: 86.4
2135 Female, age 91, both hemispheres 111.2
2341 Male, age 80, both hemispheres 101.7
2070 Male, age 76, both hemispheres 79.8
2371 Male, age 61, both hemispheres 76.2
2752 Female, age 85, both hemispheres 63.1
Prepositus hypoglossal nucleus
nTPM: 78.6
2855 Female, age 85, right hemisphere 96.4
2086 Male, age 80, both hemispheres 60.8
Principal sensory trigeminal nucleus
nTPM: 82.2
2367 Female, age 91, left hemisphere 108.8
2324 Male, age 76, both hemispheres 92.5
2008 Male, age 80, left hemisphere 71.8
2158 Male, age 61, both hemispheres 55.6
Reticular pontine nucleus, caudal
nTPM: 89.4
2559 Male, age 74, both hemispheres 110.1
2457 Female, age 91, both hemispheres 94.3
2332 Male, age 80, right hemisphere 77.3
2092 Male, age 76, both hemispheres 75.9
Reticular pontine nucleus, oral
nTPM: 90.5
2361 Male, age 74, both hemispheres 103.8
2366 Female, age 91, both hemispheres 97.7
2167 Male, age 76, both hemispheres 84.6
1939 Male, age 80, both hemispheres 83.6
2012 Female, age 85, both hemispheres 82.9
Reticulotegmental nucleus
nTPM: 82.3
2322 Female, age 91, both hemispheres 97.5
2452 Male, age 74, both hemispheres 86.7
2333 Male, age 80, both hemispheres 78.6
2325 Male, age 76, both hemispheres 66.6
Spinal trigeminal nucleus, caudal
nTPM: 90.1
2447 Male, age 76, both hemispheres 100.4
2312 Male, age 61, both hemispheres 93.5
2390 Female, age 91, both hemispheres 92.9
2308 Male, age 80, both hemispheres 83.2
2642 Male, age 74, both hemispheres 80.3
Spinal trigeminal nucleus, interpolar
nTPM: 76.7
2625 Male, age 61, both hemispheres 84.1
2389 Female, age 91, both hemispheres 81.2
2386 Female, age 85, both hemispheres 76.4
2033 Male, age 80, both hemispheres 74.3
2066 Male, age 76, right hemisphere 67.6
Spinal trigeminal nucleus, oral
nTPM: 80.9
2164 Male, age 80, both hemispheres 90.0
1978 Male, age 76, both hemispheres 80.5
2737 Female, age 85, both hemispheres 72.1
Spinal vestibular nucleus
nTPM: 82.5
2384 Male, age 74, both hemispheres 96.5
2748 Male, age 76, both hemispheres 89.9
2806 Female, age 85, both hemispheres 87.8
2186 Female, age 91, both hemispheres 85.5
2780 Male, age 80, both hemispheres 71.8
2796 Male, age 61, both hemispheres 63.5
Subcoeruleus area
nTPM: 78.2
2369 Female, age 85, left hemisphere 106.0
2089 Male, age 76, left hemisphere 75.6
1958 Male, age 80, both hemispheres 72.2
2451 Male, age 74, both hemispheres 71.4
2323 Female, age 91, left hemisphere 65.9
Superior olive
nTPM: 85.6
2561 Female, age 91, both hemispheres 94.5
2329 Male, age 80, right hemisphere 93.2
2364 Male, age 74, right hemisphere 88.0
2020 Male, age 76, both hemispheres 79.8
1875 Female, age 85, both hemispheres 72.6
Superior vestibular nucleus
nTPM: 87.8
2383 Male, age 74, both hemispheres 98.4
2061 Male, age 76, both hemispheres 87.1
2015 Male, age 80, both hemispheres 78.0
Ventral medullary reticular nucleus
nTPM: 91.4
2372 Male, age 61, both hemispheres 97.6
2060 Male, age 76, both hemispheres 85.3
Ventral periolivary nuclei
nTPM: 76.0
2794 Female, age 91, left hemisphere 78.0
2023 Male, age 76, both hemispheres 77.6
2165 Male, age 80, both hemispheres 75.0
2130 Female, age 85, both hemispheres 73.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 81.7
2118 Male, age 80, both hemispheres 88.2
2180 Male, age 61, both hemispheres 86.8
2302 Female, age 91, both hemispheres 82.0
1986 Male, age 76, both hemispheres 77.1
2741 Female, age 85, both hemispheres 74.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 82.4
2456 Female, age 91, both hemispheres 98.2
2840 Female, age 85, both hemispheres 93.6
2449 Male, age 74, both hemispheres 84.3
2161 Male, age 80, both hemispheres 78.6
1959 Male, age 76, both hemispheres 70.6
2359 Male, age 61, both hemispheres 69.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 166.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 166.0
FF:10182-103D2 60 years, female 225.1
FF:10165-103B3 76 years, female 106.8
Medulla oblongata
Scaled Tags Per Million: 130.6
FF:10174-103C3 60 years, female 153.7
FF:10038-101F2 18-64 years, mixed 136.4
FF:10155-103A2 76 years, female 101.9
Pons
Scaled Tags Per Million: 106.4
FF:10033-101E6 18-54 years, mixed 106.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 130.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 130.6
Samples: 4

Max nTPM: 140.7
Min nTPM: 114.5
Sample A Female 140.7
Sample B Female 114.5
Sample C Male 127.0
Sample D Male 140.3
Pons
nTPM: 99.1
Samples: 4

Max nTPM: 134.2
Min nTPM: 73.4
Sample A Female 134.2
Sample B Female 75.3
Sample C Male 73.4
Sample D Male 113.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 43.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 43.9
Samples: 4

Max nTPM: 47.2
Min nTPM: 40.4
Sample A Male 47.2
Sample B Male 40.4
Sample C Female 44.1
Sample D Female 43.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.3
72077454 Antisense, RP_051017_03_A08, Mouse strain C57BL/6J (56 days, male) 6.7
68845275 Antisense, RP_050224_01_E01, Mouse strain C57BL/6J (56 days, male) 5.9
Pons
Expression energy: 4.4
68845275 Antisense, RP_050224_01_E01, Mouse strain C57BL/6J (56 days, male) 4.6
72077454 Antisense, RP_051017_03_A08, Mouse strain C57BL/6J (56 days, male) 4.1

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