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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:221.6 nTPM
HPA Brain:952.0 nTPM
GTEx:221.6 nTPM
FANTOM5:848.5 Scaled Tags Per Million
Pig:125.1 nTPM
Mouse:100.9 nTPM
Allen mouse:6.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006881
Glial cells High
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

952.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 334.2
2288 Male, age 75, left hemisphere 487.9
1781 Male, age 74, unknown 435.5
2481 Female, age 94, left hemisphere 377.3
2846 Female, age 79, unknown 367.2
2289 Male, age 61, right hemisphere 301.5
1854 Male, age 80, left hemisphere 278.7
2290 Female, age 72, unknown 277.8
1857 Female, age 85, left hemisphere 147.8
Globus pallidus, externus
nTPM: 911.9
2646 Male, age 61, right hemisphere 1108.8
2567 Female, age 72, unknown 1076.2
1996 Male, age 80, right hemisphere 1063.1
2772 Female, age 79, unknown 762.0
2395 Male, age 75, both hemispheres 549.2
Globus pallidus, internus
nTPM: 952.0
2111 Female, age 85, right hemisphere 1147.2
2566 Female, age 72, unknown 1133.1
2778 Female, age 91, both hemispheres 1127.2
2287 Male, age 75, right hemisphere 912.4
2037 Male, age 80, right hemisphere 878.8
1818 Male, age 74, unknown 754.0
2483 Female, age 94, right hemisphere 711.1
Nucleus accumbens
nTPM: 368.5
2391 Female, age 94, left hemisphere 591.8
2698 Female, age 72, unknown 522.7
2732 Male, age 80, right hemisphere 475.0
2286 Male, age 75, left hemisphere 399.0
1806 Female, age 85, left hemisphere 298.4
1783 Male, age 74, unknown 282.2
2824 Male, age 61, right hemisphere 238.1
1856 Female, age 91, right hemisphere 140.8
Nucleus basalis of Meynert
nTPM: 559.5
2569 Male, age 61, both hemispheres 1058.5
2821 Male, age 75, both hemispheres 449.0
2484 Female, age 94, left hemisphere 448.3
2393 Male, age 80, right hemisphere 282.0
Nucleus of the diagonal band
nTPM: 155.7
1812 Female, age 91, both hemispheres 199.7
2029 Male, age 61, right hemisphere 192.1
1979 Male, age 74, unknown 145.7
2195 Female, age 85, both hemispheres 121.0
2775 Male, age 80, right hemisphere 119.9
Putamen
nTPM: 378.7
2489 Female, age 72, unknown 511.1
2647 Male, age 75, left hemisphere 503.2
2482 Female, age 94, left hemisphere 429.8
1829 Male, age 74, unknown 401.5
1937 Female, age 91, right hemisphere 334.3
2466 Female, age 79, unknown 299.9
1838 Male, age 80, right hemisphere 171.2
Septal nuclei
nTPM: 216.8
2394 Male, age 61, left hemisphere 402.9
2199 Male, age 80, right hemisphere 274.2
2629 Female, age 94, right hemisphere 208.9
2059 Female, age 85, both hemispheres 189.6
2031 Female, age 72, unknown 157.2
2009 Female, age 91, both hemispheres 153.5
1960 Male, age 74, unknown 131.0
Stria terminalis, bed nucleus
nTPM: 229.3
1974 Female, age 91, both hemispheres 274.2
2201 Male, age 74, unknown 248.1
2486 Female, age 94, both hemispheres 165.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

221.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 153.1
Samples: 246

Max nTPM: 408.0
Min nTPM: 25.6
Std nTPM: 68.6
Median nTPM: 147.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 408.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 367.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 355.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 349.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 333.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 330.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 324.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 312.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 312.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 294.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 291.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 290.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 290.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 284.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 282.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 279.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 276.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 274.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 273.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 260.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 256.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 256.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 256.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 254.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 237.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 231.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 229.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 227.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 225.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 225.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 224.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 221.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 219.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 218.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 216.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 216.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 216.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 215.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 214.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 214.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 214.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 213.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 213.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 210.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 210.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 209.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 207.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 205.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 205.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 203.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 202.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 201.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 200.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 199.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 198.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 198.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 196.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 192.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 191.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 191.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 189.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 189.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 188.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 188.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 186.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 186.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 185.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 184.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 184.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 184.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 182.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 181.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 180.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 180.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 180.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 179.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 179.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 178.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 177.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 177.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 175.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 172.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 172.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 172.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 170.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 170.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 169.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 169.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 168.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 167.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 166.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 165.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 164.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 162.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 162.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 162.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 161.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 161.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 160.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 160.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 160.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 158.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 158.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 158.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 158.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 158.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 157.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 156.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 155.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 155.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 154.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 153.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 152.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 152.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 151.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 151.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 150.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 149.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 149.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 149.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 149.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 149.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 147.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 147.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 147.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 147.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 145.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 144.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 142.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 142.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 140.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 139.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 139.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 139.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 139.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 138.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 136.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 136.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 135.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 135.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 134.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 133.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 132.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 130.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 128.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 128.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 128.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 128.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 127.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 127.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 127.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 127.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 126.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 126.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 123.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 123.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 122.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 122.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 120.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 120.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 118.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 118.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 116.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 115.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 115.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 114.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 113.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 111.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 110.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 109.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 109.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 109.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 108.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 108.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 107.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 106.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 105.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 104.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 104.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 104.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 104.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 103.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 102.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 102.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 101.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 101.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 100.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 99.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 98.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 98.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 98.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 98.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 97.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 96.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 95.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 94.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 94.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 94.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 94.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 93.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 92.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 89.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 89.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 88.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 87.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 86.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 85.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 84.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 84.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 83.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 82.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 82.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 80.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 78.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 76.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 75.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 75.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 74.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 73.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 73.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 71.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 70.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 70.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 69.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 68.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 67.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 66.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 66.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 65.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 64.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 62.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 59.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 59.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 58.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 57.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 57.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 56.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 55.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 53.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 53.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 50.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 50.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 49.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 47.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 44.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 25.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 99.8
Samples: 246

Max nTPM: 488.1
Min nTPM: 19.7
Std nTPM: 72.4
Median nTPM: 80.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 488.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 482.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 436.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 363.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 337.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 299.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 286.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 269.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 259.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 256.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 251.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 230.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 227.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 225.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 219.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 219.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 213.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 207.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 205.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 198.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 197.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 190.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 183.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 180.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 178.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 173.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 170.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 170.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 168.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 165.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 164.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 164.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 163.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 159.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 158.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 158.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 156.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 155.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 154.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 154.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 151.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 151.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 150.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 148.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 147.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 147.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 146.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 145.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 144.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 143.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 139.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 138.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 136.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 135.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 134.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 134.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 132.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 130.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 127.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 127.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 125.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 124.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 123.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 122.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 122.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 119.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 119.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 118.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 116.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 115.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 115.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 114.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 112.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 111.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 109.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 109.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 107.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 107.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 107.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 107.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 107.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 105.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 104.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 103.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 103.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 103.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 100.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 98.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 98.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 98.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 97.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 97.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 97.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 97.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 95.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 95.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 95.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 95.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 94.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 94.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 93.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 93.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 93.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 92.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 90.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 90.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 90.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 90.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 90.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 89.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 89.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 87.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 87.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 87.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 86.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 85.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 85.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 85.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 83.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 83.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 83.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 80.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 80.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 80.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 80.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 80.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 79.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 79.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 79.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 78.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 77.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 76.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 75.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 73.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 72.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 72.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 72.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 70.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 70.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 69.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 69.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 69.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 68.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 68.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 68.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 68.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 67.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 67.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 66.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 66.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 66.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 66.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 66.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 66.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 65.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 65.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 64.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 64.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 64.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 64.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 63.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 62.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 60.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 60.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 60.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 60.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 59.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 58.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 58.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 57.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 57.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 56.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 56.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 56.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 55.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 55.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 54.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 54.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 53.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 52.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 52.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 52.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 52.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 52.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 51.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 50.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 48.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 48.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 48.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 48.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 48.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 47.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 47.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 47.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 47.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 47.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 46.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 45.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 45.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 44.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 44.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 43.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 43.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 43.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 42.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 41.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 41.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 41.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 40.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 40.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 40.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 40.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 39.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 39.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 39.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 38.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 38.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 38.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 38.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 37.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 37.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 37.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 36.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 36.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 36.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 35.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 35.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 34.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 33.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 33.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 33.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 33.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 31.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 30.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 30.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 30.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 30.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 29.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 29.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 28.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 28.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 28.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 27.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 27.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 26.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 19.7
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Brain - Putamen (basal ganglia)
Average nTPM: 221.6
Samples: 205

Max nTPM: 579.4
Min nTPM: 45.5
Std nTPM: 94.6
Median nTPM: 207.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 579.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 557.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 536.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 504.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 460.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 454.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 449.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 439.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 414.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 389.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 373.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 371.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 371.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 367.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 357.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 357.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 349.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 344.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 344.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 343.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 343.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 340.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 337.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 336.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 335.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 333.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 323.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 322.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 320.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 314.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 312.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 308.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 306.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 304.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 302.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 302.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 302.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 301.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 297.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 296.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 290.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 290.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 286.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 285.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 282.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 281.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 281.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 281.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 280.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 278.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 277.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 277.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 277.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 269.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 267.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 265.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 265.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 264.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 263.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 262.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 261.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 257.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 257.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 252.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 251.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 250.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 248.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 247.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 243.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 243.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 243.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 242.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 242.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 242.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 240.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 239.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 238.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 236.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 233.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 233.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 233.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 228.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 224.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 224.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 222.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 221.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 221.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 221.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 219.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 217.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 216.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 215.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 215.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 214.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 213.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 213.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 213.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 210.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 210.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 209.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 208.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 207.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 207.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 206.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 205.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 204.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 203.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 203.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 202.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 201.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 201.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 198.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 198.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 195.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 194.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 192.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 191.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 191.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 190.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 190.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 189.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 189.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 188.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 187.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 186.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 186.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 186.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 186.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 184.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 184.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 184.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 183.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 183.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 182.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 181.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 180.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 178.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 176.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 176.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 174.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 170.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 170.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 168.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 167.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 167.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 166.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 166.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 165.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 162.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 159.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 159.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 159.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 159.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 157.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 156.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 155.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 152.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 152.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 151.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 150.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 149.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 148.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 146.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 146.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 145.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 144.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 139.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 139.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 138.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 137.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 135.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 132.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 132.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 132.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 130.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 129.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 129.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 127.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 127.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 123.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 119.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 116.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 115.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 111.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 111.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 106.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 105.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 104.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 104.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 102.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 101.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 97.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 91.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 89.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 87.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 85.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 79.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 79.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 79.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 78.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 75.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 68.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 63.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 62.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 45.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

848.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 197.8
FF:10164-103B2 76 years, female 197.8
Nucleus accumbens
Scaled Tags Per Million: 255.4
FF:10037-101F1 23-56 years, mixed 255.4
Putamen
Scaled Tags Per Million: 154.7
FF:10176-103C5 60 years, female 154.7
Globus pallidus
Scaled Tags Per Million: 848.5
FF:10161-103A8 76 years, female 1014.3
FF:10175-103C4 60 years, female 682.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

125.1
Pig sample Sample description nTPM
Caudate
nTPM: 42.0
Samples: 4

Max nTPM: 52.5
Min nTPM: 35.3
Sample A Female 52.5
Sample B Female 38.8
Sample C Male 41.4
Sample D Male 35.3
Putamen
nTPM: 125.2
Samples: 4

Max nTPM: 233.5
Min nTPM: 57.6
Sample A Female 233.5
Sample B Female 57.6
Sample C Male 82.8
Sample D Male 126.7
Septum
nTPM: 81.0
Samples: 4

Max nTPM: 94.4
Min nTPM: 57.1
Sample A Female 83.5
Sample B Female 57.1
Sample C Male 94.4
Sample D Male 88.9
Ventral pallidum
nTPM: 106.0
Samples: 4

Max nTPM: 158.9
Min nTPM: 43.1
Sample A Female 43.1
Sample B Female 91.8
Sample C Male 158.9
Sample D Male 130.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 100.3
Samples: 4

Max nTPM: 107.1
Min nTPM: 91.2
Sample A Male 100.0
Sample B Male 103.0
Sample C Female 107.1
Sample D Female 91.2
Septum
nTPM: 100.9
Samples: 4

Max nTPM: 122.8
Min nTPM: 72.7
Sample A Male 72.7
Sample B Male 93.8
Sample C Female 114.3
Sample D Female 122.8
Ventral forebrain
nTPM: 68.9
Samples: 4

Max nTPM: 74.2
Min nTPM: 66.2
Sample A Male 66.2
Sample B Male 66.2
Sample C Female 74.2
Sample D Female 68.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.4
70429303 Antisense, RP_050614_01_D08, Mouse strain C57BL/6J (56 days, male) 5.4
Pallidum
Expression energy: 6.1
70429303 Antisense, RP_050614_01_D08, Mouse strain C57BL/6J (56 days, male) 6.1

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