PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:972.0 nTPM
FANTOM5:686.9 Scaled Tags Per Million
Pig:268.4 nTPM
Mouse:196.1 nTPM
Allen mouse:8.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 972.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 825.7
2301 Female, age 85, both hemispheres 1108.4
2188 Female, age 91, both hemispheres 1009.2
2090 Male, age 80, both hemispheres 792.7
1984 Male, age 76, both hemispheres 392.3
Area postrema
nTPM: 665.6
2799 Male, age 61, both hemispheres 820.4
2306 Male, age 80, both hemispheres 769.5
2054 Male, age 76, both hemispheres 406.8
Dorsal cochlear nucleus
nTPM: 648.8
2187 Female, age 91, both hemispheres 892.0
2378 Male, age 80, both hemispheres 665.1
2802 Male, age 74, right hemisphere 654.7
2370 Male, age 61, both hemispheres 546.4
2058 Male, age 76, both hemispheres 486.1
Dorsal medullary reticular nucleus
nTPM: 590.9
2373 Male, age 61, both hemispheres 620.3
2040 Female, age 85, both hemispheres 603.6
2088 Male, age 76, both hemispheres 548.8
Dorsal motor vagal complex
nTPM: 493.1
2185 Male, age 76, both hemispheres 738.1
2797 Male, age 61, both hemispheres 630.0
2807 Female, age 85, both hemispheres 493.2
2643 Male, age 74, both hemispheres 443.2
2000 Male, age 74, unknown 425.4
2133 Female, age 91, both hemispheres 424.9
2844 Male, age 55, unknown 408.2
2813 Female, age 72, unknown 381.9
Dorsal tegmental nucleus
nTPM: 689.8
2083 Male, age 80, both hemispheres 853.2
2326 Male, age 74, both hemispheres 676.1
2358 Male, age 61, both hemispheres 663.5
1936 Male, age 76, left hemisphere 566.6
Dorsolateral tegmental area
nTPM: 691.3
2751 Female, age 85, both hemispheres 888.4
2337 Male, age 61, both hemispheres 881.7
2654 Male, age 80, both hemispheres 878.3
2360 Male, age 74, both hemispheres 445.3
2141 Male, age 76, both hemispheres 362.6
Gigantocellular reticular nuclei, medullary
nTPM: 751.4
2314 Male, age 61, both hemispheres 995.4
2387 Female, age 91, both hemispheres 918.6
1876 Female, age 85, both hemispheres 781.2
2310 Male, age 80, both hemispheres 761.5
2022 Male, age 76, right hemisphere 536.9
2462 Male, age 74, both hemispheres 515.2
Gigantocellular reticular nuclei, pars
nTPM: 711.8
2330 Male, age 80, both hemispheres 845.5
2706 Male, age 80, both hemispheres 792.8
2336 Male, age 61, both hemispheres 758.1
2084 Female, age 85, both hemispheres 627.2
2168 Male, age 76, both hemispheres 535.2
Inferior olive
nTPM: 725.2
2628 Female, age 91, both hemispheres 918.2
2178 Male, age 61, both hemispheres 765.7
2379 Male, age 80, both hemispheres 672.4
2085 Female, age 85, both hemispheres 658.0
2563 Male, age 74, both hemispheres 611.8
Kolliker-Fuse nucleus
nTPM: 856.2
2793 Female, age 91, left hemisphere 1245.9
2163 Male, age 80, both hemispheres 713.6
2315 Male, age 76, right hemisphere 609.0
Lateral lemniscal nuclei
nTPM: 763.7
2320 Female, age 91, left hemisphere 1008.6
2036 Male, age 80, both hemispheres 808.5
2746 Female, age 85, left hemisphere 710.5
2453 Male, age 74, right hemisphere 696.0
2169 Male, age 76, both hemispheres 594.9
Lateral medullary reticular nucleus
nTPM: 730.1
2852 Male, age 80, both hemispheres 889.4
2374 Male, age 61, both hemispheres 786.8
2305 Male, age 74, both hemispheres 708.6
2190 Female, age 85, both hemispheres 683.6
2804 Female, age 91, both hemispheres 657.9
2044 Male, age 76, both hemispheres 654.4
Lateral parabrachial nucleus
nTPM: 747.5
2792 Male, age 76, both hemispheres 1116.7
2013 Male, age 80, both hemispheres 734.1
2790 Male, age 61, both hemispheres 653.5
2139 Female, age 85, right hemisphere 485.7
Lateral vestibular nucleus
nTPM: 735.3
2311 Male, age 80, both hemispheres 780.0
2184 Male, age 76, both hemispheres 690.6
Locus coeruleus
nTPM: 377.8
2720 Male, age 74, both hemispheres 524.1
2162 Male, age 80, both hemispheres 509.7
2317 Female, age 72, unknown 389.4
2123 Female, age 91, both hemispheres 354.4
2014 Male, age 55, unknown 346.6
1980 Male, age 76, both hemispheres 271.6
2788 Male, age 74, unknown 248.7
Medial olivary nucleus
nTPM: 868.0
1962 Male, age 76, both hemispheres 1093.5
1943 Male, age 61, both hemispheres 841.5
2851 Male, age 80, both hemispheres 807.0
2138 Female, age 91, both hemispheres 729.8
Medial parabrachial nucleus
nTPM: 804.2
2170 Female, age 91, both hemispheres 993.1
2854 Male, age 80, both hemispheres 844.9
2463 Female, age 85, right hemisphere 844.6
2786 Male, age 76, both hemispheres 727.7
2156 Male, age 61, both hemispheres 610.5
Medial periolivary nuclei
nTPM: 665.3
2458 Female, age 91, both hemispheres 899.6
2081 Male, age 80, both hemispheres 853.1
2791 Male, age 74, right hemisphere 571.6
2171 Female, age 85, both hemispheres 537.7
2063 Male, age 76, both hemispheres 464.6
Medial vestibular nucleus
nTPM: 654.7
2803 Female, age 91, both hemispheres 853.4
2624 Male, age 61, both hemispheres 812.3
2801 Male, age 74, both hemispheres 811.0
2093 Male, age 80, both hemispheres 690.9
2743 Female, age 85, both hemispheres 433.4
2134 Male, age 76, both hemispheres 327.0
Motor facial nucleus
nTPM: 665.9
2697 Female, age 85, both hemispheres 861.7
2126 Male, age 61, both hemispheres 710.6
2795 Female, age 91, both hemispheres 696.3
2327 Male, age 80, both hemispheres 683.4
2365 Male, age 74, right hemisphere 634.2
2062 Male, age 76, both hemispheres 409.2
Motor hypoglossal nucleus
nTPM: 660.6
2182 Male, age 80, both hemispheres 1051.5
2125 Female, age 91, both hemispheres 783.7
2132 Female, age 85, both hemispheres 704.4
2461 Male, age 61, both hemispheres 446.3
2277 Male, age 76, both hemispheres 317.3
Motor trigeminal nucleus
nTPM: 815.8
2321 Female, age 91, both hemispheres 1041.7
2560 Male, age 74, both hemispheres 912.8
2309 Male, age 76, both hemispheres 715.3
2335 Male, age 61, both hemispheres 707.7
2079 Male, age 80, both hemispheres 701.5
Nuclei of the trapezoid body
nTPM: 612.7
2166 Male, age 80, both hemispheres 893.3
2368 Female, age 91, both hemispheres 768.8
2159 Male, age 61, both hemispheres 558.5
1983 Male, age 76, both hemispheres 427.5
2735 Female, age 85, both hemispheres 415.5
Nucleus ambiguus
nTPM: 751.7
2071 Male, age 76, both hemispheres 908.4
2096 Female, age 85, both hemispheres 594.9
Nucleus cuneatus
nTPM: 694.3
2380 Male, age 80, both hemispheres 861.8
2381 Male, age 80, both hemispheres 783.2
2808 Female, age 85, both hemispheres 764.0
2805 Female, age 91, both hemispheres 745.5
2376 Male, age 61, both hemispheres 737.6
2100 Male, age 76, both hemispheres 729.6
2564 Male, age 74, both hemispheres 565.7
2562 Male, age 61, both hemispheres 549.8
2131 Male, age 76, both hemispheres 511.5
Nucleus gracilis
nTPM: 780.9
2382 Male, age 80, both hemispheres 979.5
2299 Female, age 85, both hemispheres 703.0
2627 Male, age 74, both hemispheres 660.1
Nucleus raphe magnus
nTPM: 640.7
2459 Female, age 91, both hemispheres 947.0
2328 Male, age 80, both hemispheres 773.0
2051 Male, age 76, both hemispheres 688.6
2172 Female, age 85, both hemispheres 542.7
2455 Male, age 74, both hemispheres 542.4
2160 Male, age 61, both hemispheres 350.6
Nucleus raphe obscurus
nTPM: 972.0
2142 Male, age 76, midline 1113.1
2845 Female, age 85, midline 996.8
2800 Male, age 61, midline 806.0
Nucleus raphe pallidus
nTPM: 902.2
2145 Male, age 76, midline 1170.9
1924 Male, age 61, midline 773.9
2183 Male, age 80, midline 761.8
Nucleus tractus solitarii
nTPM: 312.7
2307 Male, age 80, both hemispheres 367.3
2656 Male, age 76, both hemispheres 331.2
2191 Female, age 85, both hemispheres 324.4
2144 Female, age 91, right hemisphere 228.1
Paramedian reticular nucleus
nTPM: 655.8
2052 Male, age 76, both hemispheres 736.1
2050 Female, age 85, both hemispheres 718.8
2057 Male, age 80, both hemispheres 679.2
2313 Male, age 61, both hemispheres 489.0
Parvicellular reticular nuclei
nTPM: 798.6
2095 Male, age 76, both hemispheres 828.8
2558 Male, age 74, both hemispheres 805.7
2119 Male, age 80, both hemispheres 761.4
Parvicellular reticular nuclei, medullary
nTPM: 605.3
2189 Female, age 91, both hemispheres 751.9
2181 Male, age 80, left hemisphere 545.2
2091 Female, age 85, both hemispheres 518.7
Pedunculopontine tegmental nucleus
nTPM: 609.2
2338 Male, age 61, both hemispheres 706.9
2334 Male, age 80, both hemispheres 666.8
1921 Female, age 85, both hemispheres 454.0
Peritrigeminal nucleus
nTPM: 620.5
2136 Male, age 76, both hemispheres 699.4
2179 Male, age 61, both hemispheres 614.2
2067 Female, age 85, both hemispheres 547.8
Pontine nuclei
nTPM: 749.4
2454 Male, age 74, left hemisphere 985.6
2319 Female, age 91, both hemispheres 963.4
2787 Female, age 85, both hemispheres 858.7
2115 Male, age 80, left hemisphere 790.9
1968 Male, age 76, left hemisphere 693.5
2109 Female, age 72, unknown 673.0
1863 Male, age 55, unknown 608.6
2727 Male, age 61, right hemisphere 421.6
Pontine raphe nucleus
nTPM: 549.4
2122 Female, age 85, midline 639.2
2853 Male, age 76, midline 459.7
Posteroventral cochlear nucleus
nTPM: 737.2
2135 Female, age 91, both hemispheres 994.2
2341 Male, age 80, both hemispheres 834.7
2371 Male, age 61, both hemispheres 674.1
2070 Male, age 76, both hemispheres 616.7
2752 Female, age 85, both hemispheres 566.1
Prepositus hypoglossal nucleus
nTPM: 554.0
2855 Female, age 85, right hemisphere 709.9
2086 Male, age 80, both hemispheres 398.1
Principal sensory trigeminal nucleus
nTPM: 665.0
2367 Female, age 91, left hemisphere 1000.0
2324 Male, age 76, both hemispheres 645.4
2008 Male, age 80, left hemisphere 612.9
2158 Male, age 61, both hemispheres 401.7
Reticular pontine nucleus, caudal
nTPM: 838.0
2457 Female, age 91, both hemispheres 965.7
2559 Male, age 74, both hemispheres 880.9
2332 Male, age 80, right hemisphere 825.9
2092 Male, age 76, both hemispheres 679.6
Reticular pontine nucleus, oral
nTPM: 862.1
2366 Female, age 91, both hemispheres 1110.0
2361 Male, age 74, both hemispheres 867.3
1939 Male, age 80, both hemispheres 818.8
2167 Male, age 76, both hemispheres 764.9
2012 Female, age 85, both hemispheres 749.4
Reticulotegmental nucleus
nTPM: 731.1
2322 Female, age 91, both hemispheres 854.1
2452 Male, age 74, both hemispheres 807.3
2333 Male, age 80, both hemispheres 777.0
2325 Male, age 76, both hemispheres 485.9
Spinal trigeminal nucleus, caudal
nTPM: 640.2
2312 Male, age 61, both hemispheres 824.9
2308 Male, age 80, both hemispheres 697.2
2390 Female, age 91, both hemispheres 626.7
2447 Male, age 76, both hemispheres 561.4
2642 Male, age 74, both hemispheres 490.9
Spinal trigeminal nucleus, interpolar
nTPM: 558.8
2389 Female, age 91, both hemispheres 749.4
2033 Male, age 80, both hemispheres 594.9
2625 Male, age 61, both hemispheres 510.7
2386 Female, age 85, both hemispheres 493.2
2066 Male, age 76, right hemisphere 446.0
Spinal trigeminal nucleus, oral
nTPM: 583.1
2164 Male, age 80, both hemispheres 786.1
1978 Male, age 76, both hemispheres 486.4
2737 Female, age 85, both hemispheres 476.8
Spinal vestibular nucleus
nTPM: 718.1
2384 Male, age 74, both hemispheres 803.9
2806 Female, age 85, both hemispheres 791.8
2748 Male, age 76, both hemispheres 729.6
2186 Female, age 91, both hemispheres 705.3
2780 Male, age 80, both hemispheres 647.5
2796 Male, age 61, both hemispheres 630.2
Subcoeruleus area
nTPM: 687.0
2369 Female, age 85, left hemisphere 1031.9
2089 Male, age 76, left hemisphere 685.0
1958 Male, age 80, both hemispheres 641.1
2451 Male, age 74, both hemispheres 575.5
2323 Female, age 91, left hemisphere 501.6
Superior olive
nTPM: 740.6
2561 Female, age 91, both hemispheres 880.2
2329 Male, age 80, right hemisphere 866.6
2020 Male, age 76, both hemispheres 782.1
1875 Female, age 85, both hemispheres 599.7
2364 Male, age 74, right hemisphere 574.3
Superior vestibular nucleus
nTPM: 527.2
2015 Male, age 80, both hemispheres 595.2
2061 Male, age 76, both hemispheres 523.3
2383 Male, age 74, both hemispheres 463.0
Ventral medullary reticular nucleus
nTPM: 629.0
2060 Male, age 76, both hemispheres 629.5
2372 Male, age 61, both hemispheres 628.6
Ventral periolivary nuclei
nTPM: 658.8
2023 Male, age 76, both hemispheres 862.1
2794 Female, age 91, left hemisphere 679.2
2165 Male, age 80, both hemispheres 668.9
2130 Female, age 85, both hemispheres 424.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 640.3
2118 Male, age 80, both hemispheres 736.8
2302 Female, age 91, both hemispheres 664.8
2180 Male, age 61, both hemispheres 652.9
1986 Male, age 76, both hemispheres 645.8
2741 Female, age 85, both hemispheres 501.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 754.8
2456 Female, age 91, both hemispheres 921.7
2840 Female, age 85, both hemispheres 851.3
2161 Male, age 80, both hemispheres 756.1
2359 Male, age 61, both hemispheres 678.2
2449 Male, age 74, both hemispheres 671.7
1959 Male, age 76, both hemispheres 649.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 686.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 686.9
FF:10182-103D2 60 years, female 775.0
FF:10165-103B3 76 years, female 598.8
Medulla oblongata
Scaled Tags Per Million: 536.9
FF:10038-101F2 18-64 years, mixed 651.3
FF:10155-103A2 76 years, female 553.6
FF:10174-103C3 60 years, female 405.9
Pons
Scaled Tags Per Million: 432.3
FF:10033-101E6 18-54 years, mixed 432.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 268.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 268.5
Samples: 4

Max nTPM: 305.6
Min nTPM: 201.3
Sample A Female 282.7
Sample B Female 201.3
Sample C Male 284.2
Sample D Male 305.6
Pons
nTPM: 165.3
Samples: 4

Max nTPM: 223.8
Min nTPM: 129.9
Sample A Female 156.6
Sample B Female 129.9
Sample C Male 150.8
Sample D Male 223.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 196.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 196.1
Samples: 4

Max nTPM: 205.1
Min nTPM: 191.4
Sample A Male 191.4
Sample B Male 192.4
Sample C Female 195.5
Sample D Female 205.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 8.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 8.0
70429303 Antisense, RP_050614_01_D08, Mouse strain C57BL/6J (56 days, male) 8.0
Pons
Expression energy: 7.9
70429303 Antisense, RP_050614_01_D08, Mouse strain C57BL/6J (56 days, male) 7.9

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