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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:1400.4 nTPM
FANTOM5:503.0 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1400.4
Sample id Sample description nTPM
Area postrema
nTPM: 190.7
2054 Male, age 76, both hemispheres 367.9
2306 Male, age 80, both hemispheres 177.5
2799 Male, age 61, both hemispheres 26.7
Dorsal medullary reticular nucleus
nTPM: 395.8
2040 Female, age 85, both hemispheres 457.4
2373 Male, age 61, both hemispheres 385.5
2088 Male, age 76, both hemispheres 344.4
Dorsal motor vagal complex
nTPM: 402.2
2133 Female, age 91, both hemispheres 1272.5
2000 Male, age 74, unknown 567.5
2185 Male, age 76, both hemispheres 402.1
2813 Female, age 72, unknown 247.8
2807 Female, age 85, both hemispheres 246.6
2844 Male, age 55, unknown 215.6
2797 Male, age 61, both hemispheres 148.1
2643 Male, age 74, both hemispheres 117.8
Gigantocellular reticular nuclei, medullary
nTPM: 458.6
2462 Male, age 74, both hemispheres 947.8
2310 Male, age 80, both hemispheres 477.6
2387 Female, age 91, both hemispheres 473.8
2022 Male, age 76, right hemisphere 344.0
1876 Female, age 85, both hemispheres 255.7
2314 Male, age 61, both hemispheres 252.9
Gigantocellular reticular nuclei, pars
nTPM: 518.4
2168 Male, age 76, both hemispheres 764.2
2330 Male, age 80, both hemispheres 508.5
2336 Male, age 61, both hemispheres 475.6
2706 Male, age 80, both hemispheres 469.5
2084 Female, age 85, both hemispheres 374.4
Inferior olive
nTPM: 238.2
2085 Female, age 85, both hemispheres 452.8
2628 Female, age 91, both hemispheres 290.2
2379 Male, age 80, both hemispheres 170.6
2563 Male, age 74, both hemispheres 145.7
2178 Male, age 61, both hemispheres 131.7
Lateral medullary reticular nucleus
nTPM: 358.9
2044 Male, age 76, both hemispheres 653.1
2190 Female, age 85, both hemispheres 421.5
2804 Female, age 91, both hemispheres 417.3
2374 Male, age 61, both hemispheres 358.2
2305 Male, age 74, both hemispheres 181.1
2852 Male, age 80, both hemispheres 122.0
Medial olivary nucleus
nTPM: 109.6
2851 Male, age 80, both hemispheres 254.7
1962 Male, age 76, both hemispheres 99.1
2138 Female, age 91, both hemispheres 62.0
1943 Male, age 61, both hemispheres 22.4
Medial vestibular nucleus
nTPM: 1011.3
2624 Male, age 61, both hemispheres 1898.1
2134 Male, age 76, both hemispheres 1169.8
2801 Male, age 74, both hemispheres 1107.6
2803 Female, age 91, both hemispheres 908.1
2093 Male, age 80, both hemispheres 602.7
2743 Female, age 85, both hemispheres 381.6
Motor hypoglossal nucleus
nTPM: 953.1
2461 Male, age 61, both hemispheres 2337.3
2125 Female, age 91, both hemispheres 883.6
2132 Female, age 85, both hemispheres 856.4
2182 Male, age 80, both hemispheres 570.6
2277 Male, age 76, both hemispheres 117.6
Nucleus ambiguus
nTPM: 321.4
2096 Female, age 85, both hemispheres 528.9
2071 Male, age 76, both hemispheres 113.9
Nucleus cuneatus
nTPM: 498.9
2131 Male, age 76, both hemispheres 1394.3
2100 Male, age 76, both hemispheres 1003.4
2564 Male, age 74, both hemispheres 433.3
2381 Male, age 80, both hemispheres 404.9
2376 Male, age 61, both hemispheres 355.0
2808 Female, age 85, both hemispheres 265.1
2562 Male, age 61, both hemispheres 224.2
2805 Female, age 91, both hemispheres 214.9
2380 Male, age 80, both hemispheres 194.8
Nucleus gracilis
nTPM: 192.9
2299 Female, age 85, both hemispheres 254.4
2382 Male, age 80, both hemispheres 170.7
2627 Male, age 74, both hemispheres 153.7
Nucleus raphe obscurus
nTPM: 196.1
2800 Male, age 61, midline 308.7
2845 Female, age 85, midline 253.8
2142 Male, age 76, midline 25.8
Nucleus raphe pallidus
nTPM: 180.8
2183 Male, age 80, midline 330.6
1924 Male, age 61, midline 154.8
2145 Male, age 76, midline 56.9
Nucleus tractus solitarii
nTPM: 604.1
2191 Female, age 85, both hemispheres 1045.4
2144 Female, age 91, right hemisphere 926.9
2307 Male, age 80, both hemispheres 292.1
2656 Male, age 76, both hemispheres 151.8
Parvicellular reticular nuclei
nTPM: 505.8
2558 Male, age 74, both hemispheres 734.8
2095 Male, age 76, both hemispheres 491.7
2119 Male, age 80, both hemispheres 290.8
Parvicellular reticular nuclei, medullary
nTPM: 691.3
2091 Female, age 85, both hemispheres 895.8
2189 Female, age 91, both hemispheres 812.5
2181 Male, age 80, left hemisphere 365.7
Peritrigeminal nucleus
nTPM: 544.0
2136 Male, age 76, both hemispheres 579.1
2179 Male, age 61, both hemispheres 562.7
2067 Female, age 85, both hemispheres 490.2
Prepositus hypoglossal nucleus
nTPM: 656.3
2855 Female, age 85, right hemisphere 1024.9
2086 Male, age 80, both hemispheres 287.6
Spinal trigeminal nucleus, caudal
nTPM: 1015.0
2390 Female, age 91, both hemispheres 2984.8
2447 Male, age 76, both hemispheres 1115.5
2308 Male, age 80, both hemispheres 385.5
2642 Male, age 74, both hemispheres 306.7
2312 Male, age 61, both hemispheres 282.5
Spinal trigeminal nucleus, interpolar
nTPM: 1400.4
2625 Male, age 61, both hemispheres 4636.2
2389 Female, age 91, both hemispheres 808.0
2066 Male, age 76, right hemisphere 796.8
2386 Female, age 85, both hemispheres 417.8
2033 Male, age 80, both hemispheres 343.3
Spinal vestibular nucleus
nTPM: 419.2
2186 Female, age 91, both hemispheres 626.6
2796 Male, age 61, both hemispheres 546.0
2806 Female, age 85, both hemispheres 502.8
2780 Male, age 80, both hemispheres 323.5
2748 Male, age 76, both hemispheres 290.8
2384 Male, age 74, both hemispheres 225.8
Superior vestibular nucleus
nTPM: 279.5
2015 Male, age 80, both hemispheres 385.9
2061 Male, age 76, both hemispheres 257.1
2383 Male, age 74, both hemispheres 195.6
Ventral medullary reticular nucleus
nTPM: 290.6
2372 Male, age 61, both hemispheres 305.8
2060 Male, age 76, both hemispheres 275.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 467.3
2741 Female, age 85, both hemispheres 707.2
1986 Male, age 76, both hemispheres 547.0
2302 Female, age 91, both hemispheres 463.8
2180 Male, age 61, both hemispheres 362.4
2118 Male, age 80, both hemispheres 256.2

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

503.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 503.0
FF:10038-101F2 18-64 years, mixed 899.5
FF:10155-103A2 76 years, female 366.8
FF:10174-103C3 60 years, female 242.8

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