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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1141.5
nTPM
FANTOM5:
2197.6
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1141.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 385.5
1984
Male, age 76, both hemispheres
567.9
2301
Female, age 85, both hemispheres
476.3
2188
Female, age 91, both hemispheres
337.9
2090
Male, age 80, both hemispheres
160.1
Dorsal cochlear nucleus nTPM: 339.4
2187
Female, age 91, both hemispheres
390.5
2802
Male, age 74, right hemisphere
360.5
2370
Male, age 61, both hemispheres
357.2
2378
Male, age 80, both hemispheres
329.9
2058
Male, age 76, both hemispheres
259.0
Dorsal tegmental nucleus nTPM: 310.3
2083
Male, age 80, both hemispheres
399.2
2358
Male, age 61, both hemispheres
336.7
1936
Male, age 76, left hemisphere
321.8
2326
Male, age 74, both hemispheres
183.4
Dorsolateral tegmental area nTPM: 179.4
2654
Male, age 80, both hemispheres
265.6
2751
Female, age 85, both hemispheres
212.0
2141
Male, age 76, both hemispheres
179.2
2360
Male, age 74, both hemispheres
173.4
2337
Male, age 61, both hemispheres
66.9
Kolliker-Fuse nucleus nTPM: 779.6
2163
Male, age 80, both hemispheres
1651.0
2793
Female, age 91, left hemisphere
535.5
2315
Male, age 76, right hemisphere
152.3
Lateral lemniscal nuclei nTPM: 644.4
2453
Male, age 74, right hemisphere
1081.9
2169
Male, age 76, both hemispheres
889.1
2320
Female, age 91, left hemisphere
613.3
2746
Female, age 85, left hemisphere
360.8
2036
Male, age 80, both hemispheres
277.1
Lateral parabrachial nucleus nTPM: 341.1
2139
Female, age 85, right hemisphere
555.6
2790
Male, age 61, both hemispheres
394.8
2013
Male, age 80, both hemispheres
272.3
2792
Male, age 76, both hemispheres
141.7
Lateral vestibular nucleus nTPM: 1141.5
2184
Male, age 76, both hemispheres
1925.2
2311
Male, age 80, both hemispheres
357.7
Locus coeruleus nTPM: 499.3
2720
Male, age 74, both hemispheres
1032.5
2123
Female, age 91, both hemispheres
639.3
2788
Male, age 74, unknown
452.6
2014
Male, age 55, unknown
400.9
2317
Female, age 72, unknown
386.7
2162
Male, age 80, both hemispheres
334.0
1980
Male, age 76, both hemispheres
249.2
Medial parabrachial nucleus nTPM: 402.2
2156
Male, age 61, both hemispheres
853.4
2854
Male, age 80, both hemispheres
544.0
2786
Male, age 76, both hemispheres
254.3
2170
Female, age 91, both hemispheres
219.7
2463
Female, age 85, right hemisphere
139.6
Medial periolivary nuclei nTPM: 619.9
2171
Female, age 85, both hemispheres
1143.2
2063
Male, age 76, both hemispheres
675.7
2458
Female, age 91, both hemispheres
565.7
2791
Male, age 74, right hemisphere
430.8
2081
Male, age 80, both hemispheres
284.4
Motor facial nucleus nTPM: 663.0
2697
Female, age 85, both hemispheres
815.5
2327
Male, age 80, both hemispheres
812.6
2365
Male, age 74, right hemisphere
793.6
2062
Male, age 76, both hemispheres
677.1
2795
Female, age 91, both hemispheres
529.8
2126
Male, age 61, both hemispheres
349.4
Motor trigeminal nucleus nTPM: 419.7
2079
Male, age 80, both hemispheres
565.8
2560
Male, age 74, both hemispheres
495.9
2321
Female, age 91, both hemispheres
438.5
2335
Male, age 61, both hemispheres
333.8
2309
Male, age 76, both hemispheres
264.7
Nuclei of the trapezoid body nTPM: 711.6
2159
Male, age 61, both hemispheres
974.2
2735
Female, age 85, both hemispheres
679.6
2368
Female, age 91, both hemispheres
653.6
1983
Male, age 76, both hemispheres
650.6
2166
Male, age 80, both hemispheres
599.9
Nucleus raphe magnus nTPM: 889.9
2455
Male, age 74, both hemispheres
1191.2
2172
Female, age 85, both hemispheres
1185.2
2160
Male, age 61, both hemispheres
1125.1
2328
Male, age 80, both hemispheres
752.0
2459
Female, age 91, both hemispheres
640.6
2051
Male, age 76, both hemispheres
445.7
Paramedian reticular nucleus nTPM: 470.1
2050
Female, age 85, both hemispheres
580.7
2313
Male, age 61, both hemispheres
544.0
2057
Male, age 80, both hemispheres
437.1
2052
Male, age 76, both hemispheres
318.7
Pedunculopontine tegmental nucleus nTPM: 273.7
2334
Male, age 80, both hemispheres
349.4
2338
Male, age 61, both hemispheres
294.1
1921
Female, age 85, both hemispheres
177.6
Pontine nuclei nTPM: 564.0
2787
Female, age 85, both hemispheres
742.4
1863
Male, age 55, unknown
727.2
2727
Male, age 61, right hemisphere
684.4
2454
Male, age 74, left hemisphere
617.2
1968
Male, age 76, left hemisphere
567.0
2109
Female, age 72, unknown
482.3
2115
Male, age 80, left hemisphere
364.8
2319
Female, age 91, both hemispheres
326.9
Pontine raphe nucleus nTPM: 301.6
2122
Female, age 85, midline
483.0
2853
Male, age 76, midline
120.1
Posteroventral cochlear nucleus nTPM: 327.2
2752
Female, age 85, both hemispheres
480.9
2070
Male, age 76, both hemispheres
427.6
2371
Male, age 61, both hemispheres
402.6
2341
Male, age 80, both hemispheres
293.3
2135
Female, age 91, both hemispheres
31.9
Principal sensory trigeminal nucleus nTPM: 929.9
2324
Male, age 76, both hemispheres
1555.4
2158
Male, age 61, both hemispheres
1055.2
2367
Female, age 91, left hemisphere
569.4
2008
Male, age 80, left hemisphere
539.5
Reticular pontine nucleus, caudal nTPM: 553.3
2332
Male, age 80, right hemisphere
996.2
2457
Female, age 91, both hemispheres
578.6
2092
Male, age 76, both hemispheres
450.7
2559
Male, age 74, both hemispheres
187.5
Reticular pontine nucleus, oral nTPM: 413.7
2361
Male, age 74, both hemispheres
721.7
2366
Female, age 91, both hemispheres
492.4
2012
Female, age 85, both hemispheres
357.8
2167
Male, age 76, both hemispheres
291.7
1939
Male, age 80, both hemispheres
204.6
Reticulotegmental nucleus nTPM: 625.2
2322
Female, age 91, both hemispheres
858.1
2333
Male, age 80, both hemispheres
597.5
2325
Male, age 76, both hemispheres
561.1
2452
Male, age 74, both hemispheres
484.1
Spinal trigeminal nucleus, oral nTPM: 920.2
2164
Male, age 80, both hemispheres
1640.8
2737
Female, age 85, both hemispheres
837.1
1978
Male, age 76, both hemispheres
282.6
Subcoeruleus area nTPM: 323.9
2089
Male, age 76, left hemisphere
475.3
1958
Male, age 80, both hemispheres
401.1
2323
Female, age 91, left hemisphere
375.5
2451
Male, age 74, both hemispheres
218.4
2369
Female, age 85, left hemisphere
149.3
Superior olive nTPM: 567.9
2329
Male, age 80, right hemisphere
672.8
2561
Female, age 91, both hemispheres
619.1
1875
Female, age 85, both hemispheres
587.9
2364
Male, age 74, right hemisphere
562.0
2020
Male, age 76, both hemispheres
397.7
Ventral periolivary nuclei nTPM: 654.0
2165
Male, age 80, both hemispheres
902.0
2794
Female, age 91, left hemisphere
707.6
2130
Female, age 85, both hemispheres
661.0
2023
Male, age 76, both hemispheres
345.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 565.1
2449
Male, age 74, both hemispheres
982.4
2840
Female, age 85, both hemispheres
807.3
2161
Male, age 80, both hemispheres
517.0
1959
Male, age 76, both hemispheres
446.5
2456
Female, age 91, both hemispheres
430.9
2359
Male, age 61, both hemispheres
206.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
