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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:249.6 nTPM
HPA Brain:224.7 nTPM
GTEx:249.6 nTPM
FANTOM5:172.1 Scaled Tags Per Million
Pig:94.7 nTPM
Mouse:76.4 nTPM
Allen mouse:3.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041428Antibody HPA041722
Glial cells Not detectedLow
Neuronal cells LowMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

224.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 141.3
2288 Male, age 75, left hemisphere 173.6
2846 Female, age 79, unknown 169.2
2481 Female, age 94, left hemisphere 152.7
1781 Male, age 74, unknown 137.6
1857 Female, age 85, left hemisphere 134.3
2290 Female, age 72, unknown 130.4
1854 Male, age 80, left hemisphere 123.2
2289 Male, age 61, right hemisphere 109.0
Globus pallidus, externus
nTPM: 186.1
1996 Male, age 80, right hemisphere 232.3
2772 Female, age 79, unknown 213.7
2395 Male, age 75, both hemispheres 209.0
2646 Male, age 61, right hemisphere 162.5
2567 Female, age 72, unknown 112.9
Globus pallidus, internus
nTPM: 224.7
2287 Male, age 75, right hemisphere 277.5
2778 Female, age 91, both hemispheres 260.3
2111 Female, age 85, right hemisphere 227.8
2037 Male, age 80, right hemisphere 218.9
1818 Male, age 74, unknown 212.9
2566 Female, age 72, unknown 191.7
2483 Female, age 94, right hemisphere 183.6
Nucleus accumbens
nTPM: 154.7
2391 Female, age 94, left hemisphere 208.2
2698 Female, age 72, unknown 178.5
2286 Male, age 75, left hemisphere 169.6
1806 Female, age 85, left hemisphere 146.7
1783 Male, age 74, unknown 142.0
2732 Male, age 80, right hemisphere 134.6
1856 Female, age 91, right hemisphere 132.5
2824 Male, age 61, right hemisphere 125.7
Nucleus basalis of Meynert
nTPM: 141.5
2821 Male, age 75, both hemispheres 176.7
2569 Male, age 61, both hemispheres 151.8
2393 Male, age 80, right hemisphere 124.1
2484 Female, age 94, left hemisphere 113.3
Nucleus of the diagonal band
nTPM: 154.4
1812 Female, age 91, both hemispheres 184.9
2029 Male, age 61, right hemisphere 162.5
2775 Male, age 80, right hemisphere 156.3
2195 Female, age 85, both hemispheres 154.8
1979 Male, age 74, unknown 113.5
Putamen
nTPM: 127.9
2482 Female, age 94, left hemisphere 160.0
1937 Female, age 91, right hemisphere 147.9
1829 Male, age 74, unknown 142.9
2466 Female, age 79, unknown 118.5
2647 Male, age 75, left hemisphere 115.0
1838 Male, age 80, right hemisphere 113.4
2489 Female, age 72, unknown 97.4
Septal nuclei
nTPM: 153.8
2031 Female, age 72, unknown 185.8
2629 Female, age 94, right hemisphere 182.9
1960 Male, age 74, unknown 160.0
2394 Male, age 61, left hemisphere 146.7
2009 Female, age 91, both hemispheres 140.2
2059 Female, age 85, both hemispheres 136.4
2199 Male, age 80, right hemisphere 124.4
Stria terminalis, bed nucleus
nTPM: 135.5
1974 Female, age 91, both hemispheres 153.6
2201 Male, age 74, unknown 127.3
2486 Female, age 94, both hemispheres 125.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

249.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 220.1
Samples: 246

Max nTPM: 504.1
Min nTPM: 98.0
Std nTPM: 49.0
Median nTPM: 215.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 504.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 400.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 397.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 375.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 363.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 361.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 340.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 323.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 311.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 309.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 306.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 304.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 298.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 294.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 293.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 290.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 288.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 282.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 279.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 276.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 276.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 276.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 273.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 273.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 272.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 268.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 268.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 268.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 266.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 266.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 266.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 266.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 264.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 263.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 262.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 262.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 261.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 261.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 261.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 260.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 260.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 259.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 259.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 259.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 259.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 256.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 255.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 255.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 255.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 253.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 251.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 251.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 250.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 250.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 249.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 249.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 249.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 247.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 245.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 244.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 244.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 243.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 243.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 242.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 242.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 241.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 241.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 241.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 241.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 240.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 238.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 237.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 237.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 234.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 234.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 234.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 233.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 233.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 233.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 232.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 232.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 231.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 229.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 229.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 228.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 228.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 228.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 227.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 227.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 227.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 226.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 226.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 225.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 225.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 224.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 223.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 223.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 223.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 223.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 223.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 222.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 222.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 222.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 221.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 221.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 220.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 220.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 220.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 220.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 220.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 219.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 219.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 219.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 218.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 217.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 217.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 217.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 216.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 216.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 216.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 216.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 216.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 215.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 215.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 215.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 214.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 214.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 214.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 213.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 212.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 212.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 211.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 211.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 211.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 210.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 209.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 209.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 209.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 208.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 208.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 208.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 207.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 206.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 206.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 206.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 206.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 204.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 204.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 203.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 203.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 203.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 202.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 202.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 202.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 202.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 201.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 201.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 201.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 201.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 199.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 199.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 199.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 196.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 196.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 196.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 196.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 195.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 194.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 193.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 193.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 193.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 192.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 191.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 191.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 191.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 191.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 190.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 189.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 189.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 188.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 188.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 188.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 188.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 188.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 188.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 187.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 187.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 187.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 187.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 187.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 186.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 186.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 186.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 186.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 186.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 186.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 186.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 185.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 185.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 185.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 184.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 184.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 183.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 183.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 182.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 182.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 182.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 182.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 181.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 181.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 180.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 180.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 179.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 179.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 177.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 176.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 176.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 176.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 174.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 174.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 171.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 171.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 170.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 170.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 169.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 169.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 167.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 165.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 164.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 161.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 155.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 154.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 153.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 152.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 151.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 150.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 147.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 145.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 144.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 143.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 142.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 132.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 128.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 110.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 102.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 98.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 236.2
Samples: 246

Max nTPM: 445.4
Min nTPM: 129.1
Std nTPM: 55.0
Median nTPM: 229.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 445.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 431.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 423.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 404.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 380.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 364.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 362.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 354.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 343.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 343.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 337.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 332.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 328.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 327.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 324.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 321.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 320.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 315.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 314.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 312.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 310.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 310.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 309.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 307.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 307.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 307.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 305.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 305.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 302.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 300.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 298.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 297.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 297.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 295.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 291.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 291.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 290.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 290.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 289.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 288.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 287.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 287.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 287.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 286.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 284.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 283.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 279.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 279.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 278.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 278.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 278.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 277.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 277.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 276.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 275.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 274.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 274.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 273.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 272.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 272.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 270.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 269.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 269.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 269.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 267.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 265.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 265.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 265.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 264.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 264.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 263.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 262.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 261.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 260.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 257.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 255.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 254.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 253.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 252.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 252.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 252.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 252.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 251.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 250.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 250.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 249.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 249.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 248.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 248.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 248.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 247.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 247.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 246.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 244.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 244.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 244.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 243.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 243.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 243.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 242.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 241.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 239.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 239.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 238.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 238.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 238.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 237.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 237.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 236.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 235.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 235.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 235.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 234.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 233.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 232.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 231.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 231.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 231.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 230.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 230.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 230.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 229.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 229.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 229.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 229.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 228.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 227.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 227.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 227.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 226.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 224.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 224.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 224.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 223.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 223.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 222.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 221.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 221.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 221.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 219.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 219.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 219.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 219.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 219.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 218.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 218.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 217.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 216.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 216.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 216.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 215.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 213.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 213.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 213.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 213.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 212.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 212.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 211.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 209.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 209.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 208.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 208.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 207.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 207.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 206.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 206.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 206.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 206.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 206.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 205.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 205.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 205.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 205.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 205.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 205.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 204.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 204.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 203.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 203.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 202.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 202.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 201.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 201.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 200.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 199.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 198.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 198.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 196.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 196.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 195.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 195.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 195.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 194.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 193.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 193.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 193.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 191.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 190.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 190.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 189.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 188.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 187.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 187.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 186.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 185.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 185.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 185.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 184.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 184.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 184.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 183.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 183.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 181.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 180.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 179.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 178.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 178.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 177.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 175.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 174.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 173.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 172.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 171.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 169.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 169.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 168.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 168.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 166.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 164.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 160.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 158.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 158.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 155.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 154.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 153.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 151.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 148.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 147.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 147.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 146.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 146.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 144.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 141.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 138.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 132.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 129.1
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Brain - Putamen (basal ganglia)
Average nTPM: 249.6
Samples: 205

Max nTPM: 510.1
Min nTPM: 127.0
Std nTPM: 48.2
Median nTPM: 242.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 510.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 479.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 385.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 376.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 361.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 360.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 336.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 330.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 325.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 321.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 321.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 319.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 318.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 314.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 313.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 313.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 313.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 312.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 312.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 311.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 310.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 307.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 304.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 303.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 300.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 300.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 299.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 295.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 295.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 293.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 292.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 291.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 291.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 289.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 289.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 288.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 288.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 287.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 287.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 286.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 284.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 284.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 284.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 283.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 282.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 281.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 278.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 275.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 273.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 273.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 273.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 273.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 273.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 272.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 271.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 271.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 271.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 270.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 267.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 267.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 265.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 265.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 264.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 264.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 263.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 261.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 261.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 261.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 260.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 260.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 260.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 259.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 258.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 258.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 258.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 257.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 257.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 254.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 254.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 253.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 253.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 250.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 250.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 249.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 249.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 249.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 249.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 249.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 249.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 248.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 247.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 245.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 245.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 245.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 244.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 244.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 244.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 243.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 243.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 243.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 243.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 243.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 242.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 242.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 242.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 242.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 242.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 241.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 239.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 239.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 239.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 238.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 238.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 237.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 236.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 235.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 235.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 234.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 234.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 234.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 234.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 233.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 232.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 232.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 232.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 232.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 231.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 231.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 231.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 231.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 231.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 231.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 230.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 230.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 230.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 229.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 229.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 229.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 228.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 228.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 227.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 227.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 227.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 227.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 226.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 226.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 226.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 226.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 224.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 224.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 224.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 224.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 223.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 222.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 221.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 220.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 220.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 219.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 218.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 218.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 218.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 218.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 217.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 217.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 213.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 210.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 210.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 207.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 206.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 206.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 205.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 205.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 204.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 204.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 203.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 203.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 201.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 201.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 200.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 200.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 199.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 198.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 197.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 196.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 196.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 193.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 192.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 192.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 191.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 191.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 190.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 189.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 187.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 186.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 184.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 184.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 183.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 183.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 181.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 180.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 179.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 177.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 168.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 161.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 127.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

172.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 122.2
FF:10164-103B2 76 years, female 122.2
Nucleus accumbens
Scaled Tags Per Million: 153.5
FF:10037-101F1 23-56 years, mixed 153.5
Putamen
Scaled Tags Per Million: 134.7
FF:10176-103C5 60 years, female 134.7
Globus pallidus
Scaled Tags Per Million: 172.1
FF:10175-103C4 60 years, female 190.6
FF:10161-103A8 76 years, female 153.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.7
Pig sample Sample description nTPM
Caudate
nTPM: 67.1
Samples: 4

Max nTPM: 73.6
Min nTPM: 57.7
Sample A Female 67.3
Sample B Female 69.7
Sample C Male 73.6
Sample D Male 57.7
Putamen
nTPM: 75.0
Samples: 4

Max nTPM: 87.9
Min nTPM: 56.2
Sample A Female 87.9
Sample B Female 56.2
Sample C Male 81.5
Sample D Male 74.4
Septum
nTPM: 94.7
Samples: 4

Max nTPM: 134.8
Min nTPM: 75.8
Sample A Female 82.1
Sample B Female 75.8
Sample C Male 134.8
Sample D Male 85.9
Ventral pallidum
nTPM: 77.4
Samples: 4

Max nTPM: 98.8
Min nTPM: 62.6
Sample A Female 62.6
Sample B Female 75.0
Sample C Male 98.8
Sample D Male 73.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 56.1
Samples: 4

Max nTPM: 65.1
Min nTPM: 51.2
Sample A Male 56.1
Sample B Male 65.1
Sample C Female 51.2
Sample D Female 52.0
Septum
nTPM: 76.4
Samples: 4

Max nTPM: 86.4
Min nTPM: 63.8
Sample A Male 75.1
Sample B Male 80.4
Sample C Female 86.4
Sample D Female 63.8
Ventral forebrain
nTPM: 66.1
Samples: 4

Max nTPM: 72.0
Min nTPM: 59.1
Sample A Male 66.3
Sample B Male 67.0
Sample C Female 72.0
Sample D Female 59.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.7
512765 Antisense, RP_040809_02_D03, Mouse strain C57BL/6J (56 days, male) 5.3
71764910 Antisense, RP_050926_02_A09, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 3.1
512765 Antisense, RP_040809_02_D03, Mouse strain C57BL/6J (56 days, male) 6.2
71764910 Antisense, RP_050926_02_A09, Mouse strain C57BL/6J (56 days, male) 0.0

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