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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:311.1 nTPM
FANTOM5:153.6 Scaled Tags Per Million
Pig:466.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA028970Antibody HPA028971
Glial cells LowMedium
Neuronal cells MediumNot detected


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

311.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 311.1
Samples: 246

Max nTPM: 683.0
Min nTPM: 75.8
Std nTPM: 116.3
Median nTPM: 311.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 683.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 639.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 615.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 592.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 574.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 564.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 564.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 558.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 549.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 538.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 531.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 527.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 508.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 503.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 498.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 492.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 487.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 483.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 474.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 473.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 473.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 472.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 466.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 464.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 463.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 461.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 460.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 457.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 456.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 451.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 449.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 443.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 441.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 439.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 435.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 431.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 430.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 426.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 421.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 421.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 420.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 419.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 419.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 414.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 412.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 410.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 405.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 403.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 400.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 398.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 396.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 395.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 395.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 394.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 393.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 389.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 388.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 388.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 388.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 387.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 386.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 386.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 383.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 382.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 381.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 379.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 379.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 377.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 375.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 373.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 370.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 366.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 365.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 359.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 358.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 357.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 356.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 356.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 356.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 356.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 355.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 355.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 355.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 354.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 353.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 350.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 346.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 343.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 343.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 341.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 340.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 339.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 338.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 337.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 337.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 335.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 333.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 332.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 332.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 329.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 328.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 328.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 327.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 327.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 326.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 325.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 325.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 325.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 325.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 323.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 323.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 322.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 321.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 321.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 319.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 319.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 319.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 318.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 316.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 315.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 314.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 313.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 311.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 310.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 309.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 308.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 308.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 303.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 303.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 303.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 303.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 298.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 298.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 297.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 297.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 297.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 297.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 297.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 296.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 294.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 293.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 292.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 292.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 290.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 289.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 289.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 285.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 285.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 281.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 280.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 279.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 279.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 278.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 276.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 275.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 274.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 272.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 272.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 271.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 270.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 270.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 269.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 267.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 266.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 265.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 265.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 263.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 262.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 261.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 259.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 255.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 251.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 250.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 249.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 247.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 247.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 247.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 246.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 246.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 241.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 239.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 238.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 235.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 232.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 226.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 226.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 226.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 222.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 220.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 220.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 219.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 218.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 217.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 209.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 208.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 208.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 206.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 206.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 203.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 202.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 198.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 196.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 191.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 190.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 187.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 187.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 185.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 183.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 182.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 181.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 180.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 175.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 175.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 170.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 164.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 162.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 159.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 158.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 152.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 152.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 150.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 146.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 146.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 145.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 144.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 143.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 142.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 137.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 134.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 129.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 129.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 127.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 125.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 123.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 123.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 122.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 121.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 120.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 111.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 110.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 108.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 96.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 96.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 96.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 90.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 75.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

153.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 153.6
FF:10164-103B2 76 years, female 153.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

466.5
Pig sample Sample description nTPM
Caudate
nTPM: 466.6
Samples: 4

Max nTPM: 530.6
Min nTPM: 416.5
Sample A Female 416.5
Sample B Female 474.8
Sample C Male 530.6
Sample D Male 444.3

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