PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		55.668
Mouse brain, Intensity
Ponsi 		10.829
RNA expressioni
HPA Brain:1133.9 nTPM
FANTOM5:1957.3 Scaled Tags Per Million
Pig:697.4 nTPM
Mouse:686.8 nTPM
Allen mouse:17.0 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody CAB033630
Medulla oblongata mean intensity 55.668
intensityi
FRONT BACK
Nucleus of the solitary tract 55.668
Raphe magnus nucleus -
Cochlear nucleus -
Lateral paragigantocellular nucleus 21.306
Raphe pallidus nucleus -
Facial nucleus -
Hypoglossal nucleus 55.007
Ambiguus nucleus 21.650
External cuneate nucleus 17.616
Inferior olivary nucleus 12.350
Raphe obscures nucleus 15.491
Dorsal motor nucleus of vagus 25.770
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus -
Parabrachial nucleus -
Principle sensory trigeminal nucleus -
Locus coeruleus -
Pontine nucleus 9.704
Vestibular nucleus -
Pontine reticular nucleus, oral -
Lateral lemniscus 4.980
Superior paraolivary nucleus -

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1133.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 388.5
1984 Male, age 76, both hemispheres 484.6
2301 Female, age 85, both hemispheres 443.9
2188 Female, age 91, both hemispheres 352.9
2090 Male, age 80, both hemispheres 272.5
Area postrema
nTPM: 121.3
2054 Male, age 76, both hemispheres 264.6
2306 Male, age 80, both hemispheres 65.7
2799 Male, age 61, both hemispheres 33.5
Dorsal cochlear nucleus
nTPM: 327.1
2058 Male, age 76, both hemispheres 414.9
2187 Female, age 91, both hemispheres 366.1
2370 Male, age 61, both hemispheres 363.7
2802 Male, age 74, right hemisphere 256.5
2378 Male, age 80, both hemispheres 234.2
Dorsal medullary reticular nucleus
nTPM: 478.1
2040 Female, age 85, both hemispheres 704.1
2088 Male, age 76, both hemispheres 382.5
2373 Male, age 61, both hemispheres 347.6
Dorsal motor vagal complex
nTPM: 320.5
2133 Female, age 91, both hemispheres 622.3
2000 Male, age 74, unknown 401.3
2844 Male, age 55, unknown 336.8
2813 Female, age 72, unknown 318.1
2185 Male, age 76, both hemispheres 272.2
2797 Male, age 61, both hemispheres 218.1
2807 Female, age 85, both hemispheres 198.4
2643 Male, age 74, both hemispheres 196.9
Dorsal tegmental nucleus
nTPM: 345.1
2083 Male, age 80, both hemispheres 445.8
2358 Male, age 61, both hemispheres 380.0
1936 Male, age 76, left hemisphere 365.7
2326 Male, age 74, both hemispheres 189.1
Dorsolateral tegmental area
nTPM: 318.9
2141 Male, age 76, both hemispheres 494.3
2751 Female, age 85, both hemispheres 403.8
2654 Male, age 80, both hemispheres 383.3
2360 Male, age 74, both hemispheres 212.8
2337 Male, age 61, both hemispheres 100.4
Gigantocellular reticular nuclei, medullary
nTPM: 594.2
2462 Male, age 74, both hemispheres 1464.7
2310 Male, age 80, both hemispheres 576.8
1876 Female, age 85, both hemispheres 479.6
2022 Male, age 76, right hemisphere 420.7
2387 Female, age 91, both hemispheres 341.5
2314 Male, age 61, both hemispheres 282.2
Gigantocellular reticular nuclei, pars
nTPM: 652.7
2168 Male, age 76, both hemispheres 1032.0
2084 Female, age 85, both hemispheres 634.9
2336 Male, age 61, both hemispheres 613.1
2330 Male, age 80, both hemispheres 500.5
2706 Male, age 80, both hemispheres 483.1
Inferior olive
nTPM: 204.6
2085 Female, age 85, both hemispheres 330.0
2628 Female, age 91, both hemispheres 303.4
2178 Male, age 61, both hemispheres 187.3
2379 Male, age 80, both hemispheres 105.9
2563 Male, age 74, both hemispheres 96.3
Kolliker-Fuse nucleus
nTPM: 440.3
2793 Female, age 91, left hemisphere 551.6
2163 Male, age 80, both hemispheres 526.4
2315 Male, age 76, right hemisphere 242.8
Lateral lemniscal nuclei
nTPM: 914.9
2453 Male, age 74, right hemisphere 1251.8
2169 Male, age 76, both hemispheres 1026.6
2036 Male, age 80, both hemispheres 904.5
2746 Female, age 85, left hemisphere 820.8
2320 Female, age 91, left hemisphere 571.0
Lateral medullary reticular nucleus
nTPM: 337.0
2044 Male, age 76, both hemispheres 591.8
2374 Male, age 61, both hemispheres 365.3
2190 Female, age 85, both hemispheres 337.6
2804 Female, age 91, both hemispheres 320.2
2305 Male, age 74, both hemispheres 215.8
2852 Male, age 80, both hemispheres 191.3
Lateral parabrachial nucleus
nTPM: 522.2
2139 Female, age 85, right hemisphere 978.5
2013 Male, age 80, both hemispheres 497.8
2790 Male, age 61, both hemispheres 467.2
2792 Male, age 76, both hemispheres 145.4
Lateral vestibular nucleus
nTPM: 437.4
2184 Male, age 76, both hemispheres 532.8
2311 Male, age 80, both hemispheres 342.1
Locus coeruleus
nTPM: 539.2
2123 Female, age 91, both hemispheres 905.2
2720 Male, age 74, both hemispheres 724.5
2162 Male, age 80, both hemispheres 468.5
2014 Male, age 55, unknown 445.1
2317 Female, age 72, unknown 440.7
1980 Male, age 76, both hemispheres 414.3
2788 Male, age 74, unknown 375.8
Medial olivary nucleus
nTPM: 122.4
2851 Male, age 80, both hemispheres 262.7
1962 Male, age 76, both hemispheres 122.5
2138 Female, age 91, both hemispheres 74.2
1943 Male, age 61, both hemispheres 30.3
Medial parabrachial nucleus
nTPM: 459.9
2854 Male, age 80, both hemispheres 612.8
2156 Male, age 61, both hemispheres 502.8
2170 Female, age 91, both hemispheres 417.8
2786 Male, age 76, both hemispheres 402.5
2463 Female, age 85, right hemisphere 363.5
Medial periolivary nuclei
nTPM: 784.3
2171 Female, age 85, both hemispheres 1332.2
2063 Male, age 76, both hemispheres 996.1
2791 Male, age 74, right hemisphere 719.3
2458 Female, age 91, both hemispheres 476.3
2081 Male, age 80, both hemispheres 397.7
Medial vestibular nucleus
nTPM: 638.3
2624 Male, age 61, both hemispheres 729.2
2743 Female, age 85, both hemispheres 721.1
2093 Male, age 80, both hemispheres 651.7
2803 Female, age 91, both hemispheres 604.3
2801 Male, age 74, both hemispheres 567.1
2134 Male, age 76, both hemispheres 556.4
Motor facial nucleus
nTPM: 809.7
2062 Male, age 76, both hemispheres 1115.9
2365 Male, age 74, right hemisphere 1077.9
2327 Male, age 80, both hemispheres 824.2
2697 Female, age 85, both hemispheres 768.3
2795 Female, age 91, both hemispheres 578.1
2126 Male, age 61, both hemispheres 493.8
Motor hypoglossal nucleus
nTPM: 484.4
2125 Female, age 91, both hemispheres 677.6
2132 Female, age 85, both hemispheres 592.3
2461 Male, age 61, both hemispheres 536.0
2182 Male, age 80, both hemispheres 342.2
2277 Male, age 76, both hemispheres 274.2
Motor trigeminal nucleus
nTPM: 555.5
2079 Male, age 80, both hemispheres 797.5
2560 Male, age 74, both hemispheres 721.9
2335 Male, age 61, both hemispheres 476.1
2321 Female, age 91, both hemispheres 401.6
2309 Male, age 76, both hemispheres 380.2
Nuclei of the trapezoid body
nTPM: 986.4
2159 Male, age 61, both hemispheres 1498.5
2735 Female, age 85, both hemispheres 1266.3
1983 Male, age 76, both hemispheres 971.4
2166 Male, age 80, both hemispheres 643.5
2368 Female, age 91, both hemispheres 552.4
Nucleus ambiguus
nTPM: 463.5
2096 Female, age 85, both hemispheres 784.7
2071 Male, age 76, both hemispheres 142.2
Nucleus cuneatus
nTPM: 335.0
2131 Male, age 76, both hemispheres 716.2
2100 Male, age 76, both hemispheres 600.1
2376 Male, age 61, both hemispheres 398.8
2562 Male, age 61, both hemispheres 359.5
2564 Male, age 74, both hemispheres 357.9
2381 Male, age 80, both hemispheres 204.2
2808 Female, age 85, both hemispheres 151.9
2805 Female, age 91, both hemispheres 148.1
2380 Male, age 80, both hemispheres 78.3
Nucleus gracilis
nTPM: 121.8
2627 Male, age 74, both hemispheres 174.9
2299 Female, age 85, both hemispheres 112.4
2382 Male, age 80, both hemispheres 78.1
Nucleus raphe magnus
nTPM: 1133.9
2160 Male, age 61, both hemispheres 1739.8
2172 Female, age 85, both hemispheres 1502.6
2455 Male, age 74, both hemispheres 1497.1
2328 Male, age 80, both hemispheres 766.7
2051 Male, age 76, both hemispheres 706.7
2459 Female, age 91, both hemispheres 590.6
Nucleus raphe obscurus
nTPM: 285.6
2800 Male, age 61, midline 489.2
2845 Female, age 85, midline 333.9
2142 Male, age 76, midline 33.7
Nucleus raphe pallidus
nTPM: 284.7
2183 Male, age 80, midline 479.2
1924 Male, age 61, midline 318.1
2145 Male, age 76, midline 56.9
Nucleus tractus solitarii
nTPM: 319.6
2144 Female, age 91, right hemisphere 407.8
2656 Male, age 76, both hemispheres 353.2
2307 Male, age 80, both hemispheres 265.0
2191 Female, age 85, both hemispheres 252.3
Paramedian reticular nucleus
nTPM: 565.4
2050 Female, age 85, both hemispheres 907.2
2313 Male, age 61, both hemispheres 580.5
2057 Male, age 80, both hemispheres 534.4
2052 Male, age 76, both hemispheres 239.5
Parvicellular reticular nuclei
nTPM: 670.2
2558 Male, age 74, both hemispheres 1104.8
2119 Male, age 80, both hemispheres 470.0
2095 Male, age 76, both hemispheres 435.8
Parvicellular reticular nuclei, medullary
nTPM: 558.8
2189 Female, age 91, both hemispheres 659.2
2091 Female, age 85, both hemispheres 558.1
2181 Male, age 80, left hemisphere 459.0
Pedunculopontine tegmental nucleus
nTPM: 404.9
1921 Female, age 85, both hemispheres 496.7
2338 Male, age 61, both hemispheres 360.2
2334 Male, age 80, both hemispheres 357.7
Peritrigeminal nucleus
nTPM: 570.1
2179 Male, age 61, both hemispheres 721.7
2067 Female, age 85, both hemispheres 538.9
2136 Male, age 76, both hemispheres 449.6
Pontine nuclei
nTPM: 907.3
2787 Female, age 85, both hemispheres 1632.5
2727 Male, age 61, right hemisphere 1362.6
1863 Male, age 55, unknown 920.8
1968 Male, age 76, left hemisphere 903.4
2109 Female, age 72, unknown 821.0
2454 Male, age 74, left hemisphere 695.2
2115 Male, age 80, left hemisphere 515.5
2319 Female, age 91, both hemispheres 407.2
Pontine raphe nucleus
nTPM: 721.3
2122 Female, age 85, midline 1004.0
2853 Male, age 76, midline 438.6
Posteroventral cochlear nucleus
nTPM: 327.5
2752 Female, age 85, both hemispheres 706.4
2070 Male, age 76, both hemispheres 400.3
2371 Male, age 61, both hemispheres 319.4
2341 Male, age 80, both hemispheres 197.9
2135 Female, age 91, both hemispheres 13.7
Prepositus hypoglossal nucleus
nTPM: 524.0
2855 Female, age 85, right hemisphere 591.8
2086 Male, age 80, both hemispheres 456.1
Principal sensory trigeminal nucleus
nTPM: 833.0
2158 Male, age 61, both hemispheres 1494.4
2008 Male, age 80, left hemisphere 907.3
2367 Female, age 91, left hemisphere 481.7
2324 Male, age 76, both hemispheres 448.7
Reticular pontine nucleus, caudal
nTPM: 569.5
2332 Male, age 80, right hemisphere 937.2
2092 Male, age 76, both hemispheres 665.9
2457 Female, age 91, both hemispheres 433.4
2559 Male, age 74, both hemispheres 241.4
Reticular pontine nucleus, oral
nTPM: 596.1
2361 Male, age 74, both hemispheres 950.0
2012 Female, age 85, both hemispheres 796.4
1939 Male, age 80, both hemispheres 420.1
2366 Female, age 91, both hemispheres 415.3
2167 Male, age 76, both hemispheres 398.7
Reticulotegmental nucleus
nTPM: 516.8
2325 Male, age 76, both hemispheres 667.8
2452 Male, age 74, both hemispheres 514.9
2333 Male, age 80, both hemispheres 493.4
2322 Female, age 91, both hemispheres 391.1
Spinal trigeminal nucleus, caudal
nTPM: 471.8
2390 Female, age 91, both hemispheres 753.1
2447 Male, age 76, both hemispheres 623.3
2642 Male, age 74, both hemispheres 341.9
2312 Male, age 61, both hemispheres 337.7
2308 Male, age 80, both hemispheres 302.9
Spinal trigeminal nucleus, interpolar
nTPM: 656.2
2066 Male, age 76, right hemisphere 828.1
2389 Female, age 91, both hemispheres 746.4
2625 Male, age 61, both hemispheres 742.9
2386 Female, age 85, both hemispheres 486.3
2033 Male, age 80, both hemispheres 477.1
Spinal trigeminal nucleus, oral
nTPM: 473.3
2737 Female, age 85, both hemispheres 593.0
2164 Male, age 80, both hemispheres 476.9
1978 Male, age 76, both hemispheres 349.9
Spinal vestibular nucleus
nTPM: 465.7
2186 Female, age 91, both hemispheres 677.6
2780 Male, age 80, both hemispheres 541.0
2796 Male, age 61, both hemispheres 489.5
2806 Female, age 85, both hemispheres 477.5
2748 Male, age 76, both hemispheres 389.5
2384 Male, age 74, both hemispheres 219.4
Subcoeruleus area
nTPM: 527.2
2089 Male, age 76, left hemisphere 755.5
2323 Female, age 91, left hemisphere 668.4
1958 Male, age 80, both hemispheres 640.0
2369 Female, age 85, left hemisphere 292.1
2451 Male, age 74, both hemispheres 280.0
Superior olive
nTPM: 773.1
1875 Female, age 85, both hemispheres 1101.3
2364 Male, age 74, right hemisphere 827.4
2329 Male, age 80, right hemisphere 689.9
2020 Male, age 76, both hemispheres 623.9
2561 Female, age 91, both hemispheres 623.1
Superior vestibular nucleus
nTPM: 306.7
2015 Male, age 80, both hemispheres 412.9
2061 Male, age 76, both hemispheres 342.4
2383 Male, age 74, both hemispheres 165.0
Ventral medullary reticular nucleus
nTPM: 387.5
2060 Male, age 76, both hemispheres 399.3
2372 Male, age 61, both hemispheres 375.6
Ventral periolivary nuclei
nTPM: 858.2
2130 Female, age 85, both hemispheres 1163.7
2165 Male, age 80, both hemispheres 1004.6
2794 Female, age 91, left hemisphere 754.3
2023 Male, age 76, both hemispheres 510.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 465.5
2741 Female, age 85, both hemispheres 654.4
1986 Male, age 76, both hemispheres 538.9
2180 Male, age 61, both hemispheres 465.8
2302 Female, age 91, both hemispheres 422.3
2118 Male, age 80, both hemispheres 246.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 677.0
2449 Male, age 74, both hemispheres 1303.2
1959 Male, age 76, both hemispheres 734.5
2840 Female, age 85, both hemispheres 728.6
2161 Male, age 80, both hemispheres 614.3
2456 Female, age 91, both hemispheres 375.5
2359 Male, age 61, both hemispheres 305.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1957.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1169.0
FF:10182-103D2 60 years, female 1741.2
FF:10165-103B3 76 years, female 596.8
Medulla oblongata
Scaled Tags Per Million: 502.2
FF:10038-101F2 18-64 years, mixed 700.6
FF:10174-103C3 60 years, female 403.0
FF:10155-103A2 76 years, female 402.8
Pons
Scaled Tags Per Million: 1957.3
FF:10033-101E6 18-54 years, mixed 1957.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 697.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 438.0
Samples: 4

Max nTPM: 550.8
Min nTPM: 173.0
Sample A Female 550.8
Sample B Female 543.2
Sample C Male 485.1
Sample D Male 173.0
Pons
nTPM: 697.4
Samples: 4

Max nTPM: 1039.0
Min nTPM: 507.6
Sample A Female 1039.0
Sample B Female 563.8
Sample C Male 507.6
Sample D Male 679.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 686.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 686.8
Samples: 4

Max nTPM: 724.4
Min nTPM: 638.6
Sample A Male 724.4
Sample B Male 684.1
Sample C Female 700.1
Sample D Female 638.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 17.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 17.0
74881263 Antisense, RP_060315_01_A02, Mouse strain C57BL/6J (56 days, male) 17.2
70539163 Antisense, RP_050324_02_A06, Mouse strain C57BL/6J (56 days, male) 16.9
Pons
Expression energy: 15.0
74881263 Antisense, RP_060315_01_A02, Mouse strain C57BL/6J (56 days, male) 16.1
70539163 Antisense, RP_050324_02_A06, Mouse strain C57BL/6J (56 days, male) 14.0

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