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RPL18A
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  • RPL18A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:684.5 nTPM
FANTOM5:6.0 Scaled Tags Per Million
Pig:82.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055259
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

684.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 684.5
Samples: 246

Max nTPM: 1782.7
Min nTPM: 289.1
Std nTPM: 195.1
Median nTPM: 664.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1782.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1677.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1246.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1227.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1156.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1142.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1140.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1138.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1118.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1111.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1069.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1033.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1027.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1019.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1008.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1004.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 991.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 985.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 974.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 956.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 955.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 934.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 927.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 917.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 914.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 910.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 906.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 904.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 904.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 871.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 866.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 856.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 855.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 852.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 844.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 838.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 837.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 825.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 823.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 818.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 808.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 807.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 806.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 806.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 806.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 804.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 802.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 794.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 793.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 792.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 789.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 788.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 787.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 785.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 782.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 779.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 778.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 778.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 777.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 774.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 770.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 769.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 768.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 767.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 763.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 762.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 758.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 758.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 754.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 751.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 748.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 747.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 746.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 746.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 746.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 745.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 743.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 743.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 742.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 741.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 740.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 739.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 734.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 730.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 723.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 723.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 722.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 720.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 720.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 719.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 719.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 718.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 718.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 716.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 713.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 708.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 707.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 703.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 700.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 699.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 699.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 697.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 694.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 692.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 690.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 688.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 687.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 687.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 685.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 685.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 684.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 683.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 682.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 681.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 680.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 679.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 679.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 674.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 673.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 669.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 666.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 665.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 664.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 663.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 663.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 661.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 661.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 661.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 660.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 655.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 655.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 654.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 654.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 652.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 650.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 643.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 640.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 639.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 639.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 634.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 633.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 632.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 632.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 630.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 623.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 618.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 614.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 610.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 610.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 610.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 605.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 603.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 602.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 601.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 600.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 600.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 600.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 594.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 591.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 589.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 587.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 586.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 582.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 580.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 580.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 578.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 574.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 571.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 571.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 569.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 569.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 567.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 567.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 565.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 564.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 564.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 564.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 562.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 561.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 560.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 558.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 558.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 556.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 555.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 554.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 553.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 549.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 543.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 542.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 540.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 537.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 536.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 535.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 534.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 530.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 530.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 530.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 529.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 529.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 527.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 525.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 525.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 521.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 521.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 520.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 519.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 517.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 515.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 514.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 514.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 512.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 512.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 511.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 510.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 509.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 504.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 504.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 503.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 496.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 496.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 495.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 493.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 493.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 486.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 485.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 481.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 469.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 466.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 463.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 461.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 458.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 455.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 453.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 451.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 451.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 445.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 443.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 431.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 426.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 403.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 390.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 359.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 324.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 318.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 305.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 289.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

6.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 6.0
FF:10164-103B2 76 years, female 6.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.6
Pig sample Sample description nTPM
Caudate
nTPM: 82.7
Samples: 4

Max nTPM: 95.0
Min nTPM: 69.4
Sample A Female 73.5
Sample B Female 92.7
Sample C Male 95.0
Sample D Male 69.4

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