We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL18A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPL18A
TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:199.3 nTPM
GTEx:199.3 nTPM
FANTOM5:6.4 Scaled Tags Per Million
Pig:40.6 nTPM
Mouse:885.9 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.3
GTEx sample id Sample description nTPM
Retina
Average nTPM: 199.3
Samples: 105

Max nTPM: 515.5
Min nTPM: 37.2
Std nTPM: 111.0
Median nTPM:
352_1 62 years, male 515.5
218_1 71 years, female 499.7
353_1 82 years, female 496.8
354_1 81 years, female 464.2
356_1 87 years, female 447.7
319_1 81 years, male 437.2
355_1 70 years, female 424.1
351_1 91 years, male 410.5
163_1 78 years, male 393.5
452_1 88 years, female 390.1
320_1 89 years, female 389.7
321_1 62 years, female 372.7
350_1 84 years, female 361.7
349_1 83 years, male 343.0
386_1 76 years, male 323.7
377_1 82 years, female 319.7
172_1 72 years, female 282.2
243_1 75 years, male 280.2
293_1 68 years, female 277.7
295_1 61 years, female 273.8
506_1 65 years, male 272.6
251_1 78 years, male 267.9
394_1 75 years, female 266.5
376_1 75 years, female 253.2
503_1 68 years, male 250.3
292_1 71 years, male 249.5
322_1 76 years, male 249.2
335_1 73 years, female 244.8
318_1 68 years, male 243.2
447_1 81 years, male 237.0
99_1 64 years, male 235.4
177_1 74 years, male 232.5
6_1 73 years, female 221.8
237_1 82 years, male 221.7
286_1 68 years, female 218.9
389_1 86 years, female 218.1
406_1 79 years, male 216.3
425_1 59 years, female 216.1
379_1 60 years, male 209.6
317_1 60 years, male 209.1
153_1 70 years, female 206.1
384_1 83 years, male 202.5
189_1 76 years, male 200.5
291_1 76 years, male 199.8
2_1 77 years, female 199.4
405_1 91 years, male 197.3
404_1 82 years, female 195.0
517_1 88 years, male 186.9
173_1 67 years, male 184.9
115_1 83 years, male 183.5
4_1 88 years, female 181.4
348_1 84 years, male 176.8
35_1 74 years, female 175.7
17_1 71 years, male 175.6
480_1 63 years, male 174.2
375_1 74 years, female 173.5
137_1 83 years, male 172.9
316_1 62 years, male 168.2
347_1 72 years, male 167.2
526_1 61 years, male 161.8
41_1 94 years, female 161.5
145_1 84 years, male 161.0
264_1 73 years, female 154.9
229_1 69 years, female 154.8
265_1 87 years, male 153.5
18_1 88 years, male 153.4
246_1 77 years, male 152.9
396_1 62 years, male 152.6
120_1 70 years, female 150.6
254_1 77 years, female 149.1
468_1 89 years, male 149.1
311_1 78 years, male 145.2
126_1 63 years, male 137.3
9_1 66 years, female 135.8
109_1 81 years, female 132.9
217_1 76 years, male 132.2
518_1 75 years, female 129.2
307_1 66 years, female 115.4
42_1 85 years, male 115.1
139_1 64 years, female 111.4
266_1 85 years, male 111.2
288_1 66 years, female 109.0
324_1 76 years, male 104.8
314_1 67 years, male 102.8
315_1 62 years, female 100.6
119_1 70 years, female 98.8
162_1 79 years, female 97.1
499_1 55 years, female 96.3
117_1 61 years, male 95.8
142_1 61 years, female 94.3
81_1 67 years, male 80.0
495_1 57 years, female 79.9
308_1 70 years, female 79.4
32_1 67 years, male 75.3
313_1 79 years, female 74.0
415_1 77 years, female 71.4
89_1 63 years, male 71.1
43_1 64 years, female 67.3
466_1 57 years, female 66.3
414_1 84 years, female 59.1
501_1 88 years, male 52.0
149_1 88 years, male 48.4
490_1 67 years, female 45.5
491_1 89 years, female 40.0
413_1 59 years, female 37.2
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

6.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 6.4
FF:10030-101E3 24-65 years, mixed 6.4

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.6
Pig sample Sample description nTPM
Retina
nTPM: 40.6
Samples: 4

Max nTPM: 46.4
Min nTPM: 33.4
Sample A Female 37.6
Sample B Female 44.9
Sample C Male 46.4
Sample D Male 33.4

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

885.9
Mouse sample Sample description nTPM
Retina
nTPM: 885.9
Samples: 4

Max nTPM: 1046.4
Min nTPM: 765.1
Sample A Male 940.1
Sample B Male 765.1
Sample C Female 1046.4
Sample D Female 792.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org