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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: High
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: High
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: High
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Low
Processes in molecular layer: High
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: High
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:52.4 nTPM
HPA Brain:108.2 nTPM
GTEx:52.4 nTPM
FANTOM5:156.4 Scaled Tags Per Million
Pig:25.2 nTPM
Mouse:55.9 nTPM
Allen mouse:0.5 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029193Antibody CAB025430
Bergmann glia - cytoplasm/membrane High-
Bergmann glia - nucleus Not detected-
GLUC cells - cytoplasm/membrane Not detected-
GLUC cells - nucleus Not detected-
Purkinje cells -Not detected
Purkinje cells - cytoplasm/membrane Not detected-
Purkinje cells - dendrites Not detected-
Purkinje cells - nucleus Not detected-
Cells in granular layer -Not detected
Cells in molecular layer -High
Granular cells - cytoplasm/membrane High-
Granular cells - nucleus Not detected-
Molecular layer - neuropil Not detected-
Molecular layer cells - cytoplasm/membrane High-
Molecular layer cells - nucleus Not detected-
Processes in granular layer Low-
Processes in molecular layer High-
Processes in white matter Not detected-
Synaptic glomeruli - capsule Not detected-
Synaptic glomeruli - core Not detected-
White matter cells - cytoplasm/membrane High-
White matter cells - nucleus Not detected-





CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.2
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 68.0
2003 Female, age 85, right hemisphere 109.8
1768 Female, age 72, unknown 71.8
2101 Male, age 74, right hemisphere 65.6
2006 Male, age 61, right hemisphere 63.4
1769 Male, age 76, right hemisphere 61.4
1788 Male, age 55, unknown 58.3
2055 Female, age 91, right hemisphere 57.1
1774 Male, age 80, left hemisphere 56.4
Cerebellar nuclei
nTPM: 108.2
2175 Male, age 61, right hemisphere 134.2
2783 Female, age 72, unknown 123.6
2177 Female, age 85, both hemispheres 118.7
2882 Male, age 76, left hemisphere 113.1
1966 Female, age 91, left hemisphere 108.7
1871 Male, age 74, unknown 108.1
2005 Male, age 80, left hemisphere 107.8
1879 Male, age 55, unknown 91.4
2318 Male, age 74, left hemisphere 68.1
Flocculonodular lobe
nTPM: 55.8
1765 Male, age 55, unknown 70.9
1792 Male, age 74, unknown 63.6
1767 Male, age 76, left hemisphere 56.3
1835 Female, age 85, right hemisphere 54.2
2176 Female, age 91, right hemisphere 53.1
2004 Male, age 61, right hemisphere 51.1
1771 Male, age 80, left hemisphere 41.5
Vermis
nTPM: 56.2
1751 Male, age 74, right hemisphere 75.4
2834 Male, age 80, left hemisphere 67.7
1778 Female, age 91, left hemisphere 66.9
1928 Female, age 72, unknown 65.3
1766 Male, age 55, unknown 52.3
1825 Male, age 74, unknown 49.7
1770 Male, age 76, left hemisphere 49.4
1988 Female, age 85, left hemisphere 41.4
2460 Male, age 61, both hemispheres 37.9

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.4
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 36.6
Samples: 215

Max nTPM: 145.8
Min nTPM: 7.1
Std nTPM: 21.2
Median nTPM: 33.3
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 145.8
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 139.5
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 120.1
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 115.2
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 109.6
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 96.1
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 95.6
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 76.3
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 74.3
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 73.6
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 72.2
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 70.0
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 69.8
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 68.6
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 67.4
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 66.1
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 65.7
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 64.4
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 61.6
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 61.1
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 60.5
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 60.1
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 60.0
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 59.1
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 58.9
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 57.3
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 57.3
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 56.5
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 55.3
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 53.6
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 53.5
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 52.8
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 52.6
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 51.4
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 50.3
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 50.1
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 49.1
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 48.0
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 48.0
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 47.6
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 47.2
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 47.0
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 46.4
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 45.9
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 45.8
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 45.2
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 45.1
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 44.3
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 44.1
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 44.0
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 44.0
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 44.0
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 44.0
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 44.0
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 43.8
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 43.8
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 43.7
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 43.4
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 43.1
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 43.0
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 43.0
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 42.9
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 42.6
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 41.5
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 41.4
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 41.0
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 40.8
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 40.6
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 40.5
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 40.4
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 40.2
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 40.0
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 39.4
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 39.2
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 38.8
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 38.8
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 38.7
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 38.7
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 38.4
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 38.3
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 38.3
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 38.3
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 38.1
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 38.1
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 37.8
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 37.8
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 37.6
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 37.5
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 37.4
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 37.3
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 37.2
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 36.9
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 36.5
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 36.5
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 36.4
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 36.1
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 36.0
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 35.6
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 35.6
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 34.8
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 34.3
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 34.3
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 34.3
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 34.1
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 34.1
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 33.8
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 33.3
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 33.3
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 33.0
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 32.4
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 32.3
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 32.1
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 32.0
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 31.7
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 31.6
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 31.6
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 31.3
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 31.3
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 31.3
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 31.2
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 31.2
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 30.8
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 30.4
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 30.3
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 30.2
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 30.2
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 30.2
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 29.8
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 29.7
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 29.5
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 29.5
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 29.3
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 29.0
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 28.8
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 28.8
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 28.7
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 27.5
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 26.9
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 26.5
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 26.3
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 26.2
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 25.7
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 25.4
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 25.2
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 24.9
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 24.7
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 23.9
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 23.7
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 23.6
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 23.5
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 23.5
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 23.5
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 23.4
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 23.0
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 22.8
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 22.8
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 22.8
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 22.0
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 21.7
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 21.6
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 21.6
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 21.5
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 21.2
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 21.1
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 21.1
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 20.7
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 20.7
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 20.6
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 20.4
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 20.3
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 20.2
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 19.8
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 19.7
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 19.4
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 19.2
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 19.2
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 19.1
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 19.0
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 19.0
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 18.6
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 18.4
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 18.4
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 18.4
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 18.3
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 17.9
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 17.9
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 17.6
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 17.6
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 17.4
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 17.3
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 17.2
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 17.2
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 16.8
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 16.4
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 16.3
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 16.0
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 15.2
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 14.7
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 14.7
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 14.7
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 14.5
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 14.4
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 13.4
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 13.2
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 13.1
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 12.9
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 12.7
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 12.2
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 11.3
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 11.2
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 10.9
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 10.5
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 10.1
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 8.9
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 7.1
Show allShow less
Brain - Cerebellum
Average nTPM: 52.4
Samples: 241

Max nTPM: 157.3
Min nTPM: 12.5
Std nTPM: 22.0
Median nTPM: 49.3
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 157.3
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 140.3
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 134.2
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 132.4
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 124.6
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 112.3
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 110.7
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 102.6
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 99.5
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 99.2
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 95.3
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 94.1
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 88.1
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 88.0
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 85.4
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 83.8
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 83.4
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 80.9
GTEX-RU72-2926-SM-2TF66 50-59 years, female 78.5
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 77.9
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 76.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 76.8
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 76.5
GTEX-144GL-2926-SM-5O99F 50-59 years, male 75.8
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 75.7
GTEX-11ONC-3026-SM-5985W 60-69 years, male 74.8
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 74.8
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 74.4
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 73.8
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 73.7
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 73.5
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 73.4
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 73.1
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 73.1
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 71.1
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 70.9
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 70.8
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 70.2
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 69.6
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 68.7
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 68.5
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 68.3
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 68.1
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 67.8
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 67.7
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 66.2
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 66.0
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 65.8
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 65.7
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 65.6
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 65.2
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 65.0
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 64.6
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 64.5
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 64.5
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 64.3
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 63.9
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 63.2
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 63.1
GTEX-17HII-2926-SM-79OMK 50-59 years, male 62.6
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 62.4
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 62.3
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 62.2
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 62.2
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 61.9
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 61.7
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 61.7
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 61.2
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 60.4
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 60.3
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 60.2
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 60.0
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 59.5
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 59.4
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 59.1
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 59.0
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 58.3
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 58.1
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 58.0
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 58.0
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 57.5
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 57.5
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 57.4
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 57.4
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 57.2
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 57.2
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 57.1
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 56.9
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 56.8
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 56.7
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 56.5
GTEX-12126-0926-SM-5FQTW 20-29 years, male 56.5
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 56.5
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 55.7
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 55.2
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 55.0
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 54.5
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 54.4
GTEX-11DYG-2926-SM-5H132 60-69 years, male 54.1
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 53.9
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 53.5
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 53.4
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 53.3
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 53.3
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 53.1
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 53.0
GTEX-1192X-3226-SM-5987D 50-59 years, male 52.9
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 52.6
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 52.4
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 52.2
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 51.3
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 51.0
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 50.9
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 50.8
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 50.3
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 50.1
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 49.8
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 49.7
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 49.6
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 49.5
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 49.3
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 49.3
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 49.3
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 49.1
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 49.0
GTEX-18465-2926-SM-7KFSE 50-59 years, male 48.8
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 48.7
GTEX-1B933-3026-SM-731DB 50-59 years, female 48.6
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 48.2
GTEX-X261-3126-SM-4PQZC 50-59 years, male 47.7
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 47.6
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 47.4
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 47.3
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 47.1
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 46.9
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 46.1
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 46.0
GTEX-13112-2926-SM-5DUWT 50-59 years, male 45.7
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 45.7
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 45.4
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 45.4
GTEX-14PN4-3026-SM-664O4 50-59 years, male 45.3
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 44.8
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 44.7
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 44.3
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 44.1
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 44.1
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 43.9
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 43.9
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 43.8
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 43.7
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 43.7
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 43.5
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 43.3
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 43.0
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 43.0
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 42.5
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 42.3
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 41.8
GTEX-11EI6-2926-SM-5985U 60-69 years, male 41.6
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 41.6
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 41.6
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 41.6
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 41.4
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 41.3
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 41.2
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 41.1
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 41.0
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 40.7
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 40.6
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 40.5
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 40.3
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 40.3
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 40.1
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 39.9
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 39.5
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 39.5
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 39.4
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 38.9
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 38.9
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 38.4
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 38.2
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 38.2
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 37.9
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 37.3
GTEX-11NUK-3026-SM-5986K 50-59 years, male 37.2
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 37.1
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 37.0
GTEX-15G19-2826-SM-6M48K 60-69 years, male 36.5
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 36.3
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 36.2
GTEX-17EVP-2926-SM-793BU 40-49 years, male 36.2
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 35.8
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 35.6
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 35.1
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 35.0
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 34.2
GTEX-14ABY-3026-SM-664NE 50-59 years, male 34.2
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 33.9
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 33.7
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 33.6
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 33.2
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 33.1
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 33.0
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 32.8
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 32.8
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 32.3
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 31.8
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 31.8
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 31.4
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 31.3
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 30.9
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 30.5
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 29.6
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 29.3
GTEX-145LS-3026-SM-5O99S 60-69 years, female 29.1
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 29.0
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 28.7
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 28.0
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 27.7
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 27.4
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 26.3
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 25.7
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 25.2
GTEX-14E6D-2926-SM-664OP 50-59 years, male 24.6
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 23.7
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 23.5
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 23.2
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 22.8
GTEX-WL46-2826-SM-3LK81 50-59 years, male 22.5
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 20.8
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 20.3
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 19.6
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 18.9
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 18.3
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 18.2
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 17.5
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 17.1
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 15.8
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 15.1
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 12.5
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

156.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 156.4
FF:10166-103B4 76 years, female 172.5
FF:10083-102B2 22-68 years, mixed 140.4

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.2
Pig sample Sample description nTPM
Cerebellum
nTPM: 25.2
Samples: 4

Max nTPM: 32.4
Min nTPM: 19.1
Sample A Female 32.4
Sample B Female 26.2
Sample C Male 19.1
Sample D Male 23.1

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.9
Mouse sample Sample description nTPM
Cerebellum
nTPM: 55.9
Samples: 4

Max nTPM: 60.5
Min nTPM: 52.5
Sample A Male 52.5
Sample B Male 60.5
Sample C Female 54.1
Sample D Female 56.5

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 0.5
68162244 Antisense, RP_041122_02_D10, Mouse strain C57BL/6J (56 days, male) 0.5

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