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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:174.8 nTPM
HPA Brain:105.0 nTPM
GTEx:174.8 nTPM
FANTOM5:235.1 Scaled Tags Per Million
Pig:226.9 nTPM
Mouse:558.0 nTPM
Allen mouse:11.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB017685
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 99.1
2481 Female, age 94, left hemisphere 127.1
1857 Female, age 85, left hemisphere 118.7
2288 Male, age 75, left hemisphere 109.1
2290 Female, age 72, unknown 105.3
1854 Male, age 80, left hemisphere 96.2
2289 Male, age 61, right hemisphere 92.3
2846 Female, age 79, unknown 75.8
1781 Male, age 74, unknown 67.9
Globus pallidus, externus
nTPM: 71.5
1996 Male, age 80, right hemisphere 91.2
2646 Male, age 61, right hemisphere 79.3
2772 Female, age 79, unknown 76.4
2395 Male, age 75, both hemispheres 59.7
2567 Female, age 72, unknown 51.0
Globus pallidus, internus
nTPM: 75.1
2111 Female, age 85, right hemisphere 84.9
2287 Male, age 75, right hemisphere 82.3
1818 Male, age 74, unknown 80.9
2037 Male, age 80, right hemisphere 78.9
2483 Female, age 94, right hemisphere 74.4
2778 Female, age 91, both hemispheres 65.2
2566 Female, age 72, unknown 59.0
Nucleus accumbens
nTPM: 93.5
2286 Male, age 75, left hemisphere 118.9
1806 Female, age 85, left hemisphere 113.1
2698 Female, age 72, unknown 96.2
2824 Male, age 61, right hemisphere 92.2
2391 Female, age 94, left hemisphere 91.6
1856 Female, age 91, right hemisphere 85.0
1783 Male, age 74, unknown 77.4
2732 Male, age 80, right hemisphere 73.7
Nucleus basalis of Meynert
nTPM: 93.6
2821 Male, age 75, both hemispheres 112.6
2569 Male, age 61, both hemispheres 91.3
2484 Female, age 94, left hemisphere 87.5
2393 Male, age 80, right hemisphere 82.9
Nucleus of the diagonal band
nTPM: 95.7
2195 Female, age 85, both hemispheres 114.0
1979 Male, age 74, unknown 97.6
2775 Male, age 80, right hemisphere 91.6
1812 Female, age 91, both hemispheres 87.9
2029 Male, age 61, right hemisphere 87.3
Putamen
nTPM: 85.7
2482 Female, age 94, left hemisphere 111.7
2647 Male, age 75, left hemisphere 103.7
1937 Female, age 91, right hemisphere 83.8
1838 Male, age 80, right hemisphere 82.3
2489 Female, age 72, unknown 80.6
1829 Male, age 74, unknown 77.6
2466 Female, age 79, unknown 59.9
Septal nuclei
nTPM: 105.0
2059 Female, age 85, both hemispheres 154.2
1960 Male, age 74, unknown 107.3
2199 Male, age 80, right hemisphere 105.8
2394 Male, age 61, left hemisphere 105.3
2629 Female, age 94, right hemisphere 94.7
2031 Female, age 72, unknown 94.4
2009 Female, age 91, both hemispheres 73.7
Stria terminalis, bed nucleus
nTPM: 76.3
2486 Female, age 94, both hemispheres 78.3
1974 Female, age 91, both hemispheres 77.4
2201 Male, age 74, unknown 73.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

174.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 158.1
Samples: 246

Max nTPM: 419.3
Min nTPM: 56.0
Std nTPM: 60.0
Median nTPM: 143.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 419.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 403.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 337.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 332.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 326.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 314.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 303.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 280.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 279.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 277.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 273.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 271.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 269.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 269.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 268.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 253.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 250.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 249.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 247.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 247.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 246.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 245.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 245.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 242.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 242.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 240.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 240.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 238.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 233.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 230.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 227.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 225.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 224.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 224.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 223.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 223.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 222.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 220.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 219.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 218.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 216.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 215.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 212.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 208.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 208.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 207.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 204.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 204.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 203.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 203.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 202.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 198.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 197.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 197.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 196.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 196.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 195.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 193.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 193.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 193.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 191.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 190.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 190.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 188.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 187.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 187.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 185.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 185.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 185.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 184.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 181.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 179.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 179.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 176.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 176.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 175.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 175.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 173.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 173.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 173.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 172.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 172.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 172.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 172.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 169.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 169.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 169.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 169.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 168.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 167.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 167.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 166.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 164.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 164.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 164.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 162.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 160.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 160.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 159.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 158.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 158.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 156.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 156.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 154.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 154.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 153.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 152.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 151.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 151.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 151.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 150.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 149.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 149.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 148.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 148.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 148.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 147.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 147.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 146.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 145.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 145.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 144.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 143.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 143.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 142.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 141.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 141.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 141.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 141.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 141.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 141.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 140.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 140.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 139.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 139.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 139.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 138.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 137.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 137.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 136.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 135.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 135.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 135.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 134.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 133.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 132.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 132.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 132.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 132.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 131.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 131.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 131.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 131.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 130.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 130.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 129.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 129.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 129.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 129.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 128.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 128.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 127.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 127.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 126.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 126.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 126.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 125.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 124.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 124.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 123.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 123.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 122.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 121.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 121.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 120.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 120.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 120.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 119.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 119.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 119.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 119.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 118.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 117.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 117.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 117.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 116.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 116.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 116.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 116.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 115.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 114.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 113.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 113.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 113.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 113.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 112.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 112.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 111.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 110.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 109.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 108.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 107.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 106.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 105.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 104.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 104.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 103.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 102.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 101.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 100.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 100.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 99.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 99.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 98.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 98.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 98.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 96.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 95.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 94.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 94.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 94.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 91.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 91.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 90.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 89.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 88.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 88.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 87.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 87.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 86.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 86.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 85.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 85.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 83.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 83.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 79.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 77.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 76.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 72.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 70.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 69.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 68.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 67.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 66.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 65.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 56.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 174.8
Samples: 246

Max nTPM: 614.1
Min nTPM: 58.8
Std nTPM: 81.3
Median nTPM: 153.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 614.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 583.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 401.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 401.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 378.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 378.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 376.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 370.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 369.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 356.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 346.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 340.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 334.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 330.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 327.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 327.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 326.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 319.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 310.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 308.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 307.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 303.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 288.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 288.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 282.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 282.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 279.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 277.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 269.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 266.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 259.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 258.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 253.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 250.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 248.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 247.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 238.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 235.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 234.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 232.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 232.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 231.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 228.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 228.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 227.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 226.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 224.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 224.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 224.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 224.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 223.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 222.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 222.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 221.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 218.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 217.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 213.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 213.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 212.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 211.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 210.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 209.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 207.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 207.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 206.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 205.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 204.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 203.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 201.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 196.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 195.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 194.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 192.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 189.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 189.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 189.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 189.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 188.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 187.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 186.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 185.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 183.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 183.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 183.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 183.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 182.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 182.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 182.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 181.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 179.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 178.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 176.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 174.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 174.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 172.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 172.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 172.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 170.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 169.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 169.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 169.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 168.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 168.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 168.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 168.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 168.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 166.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 166.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 165.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 165.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 164.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 162.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 162.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 161.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 160.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 159.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 159.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 156.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 156.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 155.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 154.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 154.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 153.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 153.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 152.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 151.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 150.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 149.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 149.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 149.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 149.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 149.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 147.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 147.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 147.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 143.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 143.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 142.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 142.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 142.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 142.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 141.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 141.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 140.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 140.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 140.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 139.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 139.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 139.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 138.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 137.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 137.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 137.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 137.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 136.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 136.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 136.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 135.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 135.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 132.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 132.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 131.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 131.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 131.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 130.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 129.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 129.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 129.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 129.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 126.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 126.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 126.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 126.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 126.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 125.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 125.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 125.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 124.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 124.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 124.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 123.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 123.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 122.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 122.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 122.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 121.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 121.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 120.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 120.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 120.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 120.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 119.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 117.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 116.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 115.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 114.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 114.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 112.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 112.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 112.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 112.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 111.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 111.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 110.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 109.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 107.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 107.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 107.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 106.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 106.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 104.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 104.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 102.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 102.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 102.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 101.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 100.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 99.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 99.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 98.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 98.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 98.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 98.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 98.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 96.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 94.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 94.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 91.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 90.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 90.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 89.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 87.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 86.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 85.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 84.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 83.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 79.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 77.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 77.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 76.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 74.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 72.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 71.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 65.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 63.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 58.8
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Brain - Putamen (basal ganglia)
Average nTPM: 157.8
Samples: 205

Max nTPM: 377.0
Min nTPM: 68.0
Std nTPM: 53.8
Median nTPM: 150.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 377.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 360.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 300.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 299.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 298.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 298.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 295.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 274.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 272.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 260.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 259.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 258.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 250.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 249.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 243.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 240.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 240.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 240.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 240.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 238.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 234.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 232.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 220.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 217.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 216.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 215.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 212.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 210.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 209.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 209.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 208.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 207.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 206.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 203.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 203.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 201.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 201.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 200.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 199.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 199.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 197.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 197.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 195.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 193.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 192.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 192.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 190.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 189.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 189.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 188.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 185.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 185.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 183.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 181.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 181.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 181.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 180.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 180.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 180.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 179.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 178.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 177.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 175.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 174.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 173.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 173.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 172.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 172.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 171.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 170.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 170.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 170.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 168.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 167.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 167.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 166.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 166.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 166.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 165.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 165.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 163.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 162.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 162.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 160.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 158.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 158.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 158.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 157.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 157.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 156.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 156.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 154.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 154.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 154.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 153.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 153.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 153.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 153.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 152.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 152.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 151.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 151.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 150.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 150.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 150.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 149.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 147.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 146.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 145.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 144.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 143.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 143.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 140.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 140.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 140.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 140.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 138.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 137.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 136.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 136.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 134.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 134.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 133.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 132.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 131.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 131.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 130.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 130.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 129.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 129.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 129.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 128.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 127.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 127.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 127.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 126.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 126.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 125.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 125.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 125.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 125.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 125.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 124.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 124.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 124.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 124.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 124.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 123.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 123.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 122.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 121.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 121.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 121.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 120.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 119.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 117.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 117.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 117.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 117.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 116.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 115.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 115.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 115.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 115.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 114.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 113.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 113.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 113.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 113.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 113.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 112.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 110.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 107.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 107.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 106.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 104.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 103.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 103.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 103.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 101.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 99.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 99.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 98.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 98.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 98.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 94.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 94.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 94.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 94.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 93.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 92.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 91.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 91.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 90.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 89.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 86.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 86.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 86.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 86.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 85.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 83.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 81.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 79.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 79.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 68.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

235.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 235.1
FF:10164-103B2 76 years, female 235.1
Nucleus accumbens
Scaled Tags Per Million: 210.4
FF:10037-101F1 23-56 years, mixed 210.4
Putamen
Scaled Tags Per Million: 225.5
FF:10176-103C5 60 years, female 225.5
Globus pallidus
Scaled Tags Per Million: 120.3
FF:10161-103A8 76 years, female 139.4
FF:10175-103C4 60 years, female 101.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

226.9
Pig sample Sample description nTPM
Caudate
nTPM: 199.8
Samples: 4

Max nTPM: 247.0
Min nTPM: 159.7
Sample A Female 159.7
Sample B Female 181.7
Sample C Male 247.0
Sample D Male 210.7
Putamen
nTPM: 226.9
Samples: 4

Max nTPM: 328.1
Min nTPM: 134.7
Sample A Female 134.7
Sample B Female 195.7
Sample C Male 328.1
Sample D Male 249.2
Septum
nTPM: 149.6
Samples: 4

Max nTPM: 167.4
Min nTPM: 116.1
Sample A Female 164.8
Sample B Female 150.1
Sample C Male 116.1
Sample D Male 167.4
Ventral pallidum
nTPM: 197.3
Samples: 4

Max nTPM: 247.7
Min nTPM: 149.8
Sample A Female 173.6
Sample B Female 217.9
Sample C Male 149.8
Sample D Male 247.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

558.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 526.2
Samples: 4

Max nTPM: 605.8
Min nTPM: 469.2
Sample A Male 469.2
Sample B Male 471.4
Sample C Female 558.2
Sample D Female 605.8
Septum
nTPM: 473.5
Samples: 4

Max nTPM: 551.0
Min nTPM: 360.8
Sample A Male 360.8
Sample B Male 551.0
Sample C Female 472.9
Sample D Female 509.2
Ventral forebrain
nTPM: 558.0
Samples: 4

Max nTPM: 603.4
Min nTPM: 485.0
Sample A Male 603.4
Sample B Male 485.0
Sample C Female 571.6
Sample D Female 572.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.4
77455034 Antisense, RP_070129_02_A05, Mouse strain C57BL/6J (56 days, male) 13.4
77866882 Antisense, RP_070129_02_A05, Mouse strain C57BL/6J (56 days, male) 10.1
2507 Antisense, RP_040324_01_D06, Mouse strain C57BL/6J (56 days, male) 9.5
2508 Antisense, RP_040324_01_D06, Mouse strain C57BL/6J (56 days, male) 8.9
Pallidum
Expression energy: 9.7
77455034 Antisense, RP_070129_02_A05, Mouse strain C57BL/6J (56 days, male) 10.5
2507 Antisense, RP_040324_01_D06, Mouse strain C57BL/6J (56 days, male) 8.8
2508 Antisense, RP_040324_01_D06, Mouse strain C57BL/6J (56 days, male) 7.3
77866882 Antisense, RP_070129_02_A05, Mouse strain C57BL/6J (56 days, male) 7.3

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