HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:166.3 nTPM
HPA Brain:110.5 nTPM
GTEx:166.3 nTPM
FANTOM5:216.1 Scaled Tags Per Million
Pig:248.4 nTPM
Mouse:566.1 nTPM
Allen mouse:11.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB017685
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 110.5
Sample id Sample description nTPM
Hippocampus
nTPM: 95.8
2529 Female, age 94, left hemisphere 150.8
1911 Female, age 85, right hemisphere 97.5
2621 Female, age 67, right hemisphere 93.8
1898 Male, age 80, left hemisphere 83.0
1855 Male, age 76, left hemisphere 75.3
2148 Female, age 91, left hemisphere 74.2
Dentate gyrus
nTPM: 72.1
2246 Female, age 85, both hemispheres 91.7
2530 Female, age 94, left hemisphere 77.3
1927 Female, age 91, both hemispheres 70.0
2528 Male, age 74, both hemispheres 67.3
2010 Male, age 76, both hemispheres 65.3
2531 Female, age 67, both hemispheres 60.8
Entorhinal gyrus
nTPM: 107.9
1938 Female, age 85, left hemisphere 149.9
2117 Female, age 91, right hemisphere 142.8
2686 Male, age 75, right hemisphere 119.7
1787 Male, age 76, left hemisphere 86.7
2764 Male, age 80, right hemisphere 79.0
2613 Female, age 94, left hemisphere 69.6
Hippocampus, CA1
nTPM: 82.6
2527 Male, age 74, both hemispheres 136.1
2749 Male, age 80, left hemisphere 77.6
1873 Female, age 85, both hemispheres 75.0
2082 Female, age 91, right hemisphere 68.6
2045 Male, age 76, both hemispheres 55.8
Hippocampus, CA2
nTPM: 86.2
2437 Female, age 94, left hemisphere 103.4
2249 Male, age 74, both hemispheres 93.9
1892 Male, age 76, both hemispheres 87.8
1940 Female, age 85, left hemisphere 85.2
2113 Female, age 91, right hemisphere 76.9
1963 Male, age 80, left hemisphere 69.8
Hippocampus, CA3
nTPM: 79.5
1867 Male, age 76, both hemispheres 104.4
2436 Male, age 74, both hemispheres 101.3
1891 Female, age 85, both hemispheres 96.0
2861 Female, age 67, both hemispheres 68.1
2137 Male, age 80, left hemisphere 65.1
2620 Female, age 94, left hemisphere 42.3
Parahippocampal cortex
nTPM: 110.5
1933 Female, age 85, both hemispheres 155.5
2250 Female, age 67, right hemisphere 138.1
2692 Male, age 74, both hemispheres 135.6
2245 Female, age 91, both hemispheres 112.8
2622 Female, age 67, right hemisphere 109.7
2693 Female, age 94, both hemispheres 102.7
1990 Female, age 91, right hemisphere 101.3
2018 Male, age 76, both hemispheres 89.2
2532 Female, age 72, left hemisphere 80.6
1850 Male, age 80, both hemispheres 79.9
Perirhinal gyrus
nTPM: 94.9
2521 Female, age 94, right hemisphere 114.4
1841 Female, age 85, right hemisphere 102.1
1794 Male, age 80, right hemisphere 90.7
1847 Female, age 91, left hemisphere 89.9
2848 Male, age 76, right hemisphere 77.1
Subiculum
nTPM: 102.9
2438 Female, age 94, left hemisphere 146.7
2619 Male, age 74, both hemispheres 119.1
1977 Female, age 85, both hemispheres 103.7
1901 Male, age 80, both hemispheres 84.7
2042 Male, age 76, both hemispheres 82.7
2729 Female, age 91, right hemisphere 80.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 166.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 166.3
Samples: 197

Max nTPM: 399.7
Min nTPM: 51.5
Std nTPM: 60.4
Median nTPM: 155.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 399.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 346.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 325.3
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 322.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 300.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 299.4
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 295.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 293.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 289.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 287.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 282.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 216.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 216.1
FF:10153-102I9 76 years, female 286.9
FF:10169-103B7 60 years, female 145.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 248.4
Pig sample Sample description nTPM
Subiculum
nTPM: 248.4
Samples: 4

Max nTPM: 283.0
Min nTPM: 223.3
Sample A Female 249.0
Sample B Female 223.3
Sample C Male 238.2
Sample D Male 283.0
Dorsal hippocampus
nTPM: 188.2
Samples: 4

Max nTPM: 249.4
Min nTPM: 151.2
Sample A Female 186.3
Sample B Female 151.2
Sample C Male 249.4
Sample D Male 166.0
Entorhinal cortex
nTPM: 214.1
Samples: 4

Max nTPM: 267.3
Min nTPM: 163.3
Sample A Female 163.3
Sample B Female 244.8
Sample C Male 267.3
Sample D Male 181.1
Ventral hippocampus
nTPM: 178.7
Samples: 4

Max nTPM: 208.3
Min nTPM: 135.8
Sample A Female 135.8
Sample B Female 174.2
Sample C Male 196.5
Sample D Male 208.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 566.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 566.1
Samples: 4

Max nTPM: 601.4
Min nTPM: 515.2
Sample A Male 550.7
Sample B Male 601.4
Sample C Female 515.2
Sample D Female 597.1
Hippocampal formation
nTPM: 395.3
Samples: 4

Max nTPM: 485.1
Min nTPM: 330.1
Sample A Male 485.1
Sample B Male 375.8
Sample C Female 330.1
Sample D Female 390.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.8
77455034 Antisense, RP_070129_02_A05, Mouse strain C57BL/6J (56 days, male) 12.2
2507 Antisense, RP_040324_01_D06, Mouse strain C57BL/6J (56 days, male) 11.3
77866882 Antisense, RP_070129_02_A05, Mouse strain C57BL/6J (56 days, male) 10.7
2508 Antisense, RP_040324_01_D06, Mouse strain C57BL/6J (56 days, male) 9.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org