PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:178.4 nTPM
FANTOM5:87.1 Scaled Tags Per Million
Pig:25.5 nTPM
Mouse:27.1 nTPM
Allen mouse:2.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 178.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 143.2
2301 Female, age 85, both hemispheres 166.8
2090 Male, age 80, both hemispheres 145.7
2188 Female, age 91, both hemispheres 145.2
1984 Male, age 76, both hemispheres 115.1
Area postrema
nTPM: 178.4
2799 Male, age 61, both hemispheres 228.0
2306 Male, age 80, both hemispheres 180.6
2054 Male, age 76, both hemispheres 126.6
Dorsal cochlear nucleus
nTPM: 150.1
2802 Male, age 74, right hemisphere 166.5
2378 Male, age 80, both hemispheres 152.2
2370 Male, age 61, both hemispheres 150.5
2187 Female, age 91, both hemispheres 149.2
2058 Male, age 76, both hemispheres 131.9
Dorsal medullary reticular nucleus
nTPM: 147.8
2373 Male, age 61, both hemispheres 150.6
2040 Female, age 85, both hemispheres 148.1
2088 Male, age 76, both hemispheres 144.8
Dorsal motor vagal complex
nTPM: 153.6
2797 Male, age 61, both hemispheres 190.9
2643 Male, age 74, both hemispheres 189.5
2185 Male, age 76, both hemispheres 155.7
2807 Female, age 85, both hemispheres 144.0
2813 Female, age 72, unknown 140.1
2844 Male, age 55, unknown 139.7
2000 Male, age 74, unknown 138.2
2133 Female, age 91, both hemispheres 130.4
Dorsal tegmental nucleus
nTPM: 148.7
2358 Male, age 61, both hemispheres 167.0
2083 Male, age 80, both hemispheres 153.0
2326 Male, age 74, both hemispheres 139.8
1936 Male, age 76, left hemisphere 135.2
Dorsolateral tegmental area
nTPM: 129.1
2654 Male, age 80, both hemispheres 149.2
2337 Male, age 61, both hemispheres 128.1
2751 Female, age 85, both hemispheres 125.1
2141 Male, age 76, both hemispheres 122.4
2360 Male, age 74, both hemispheres 120.8
Gigantocellular reticular nuclei, medullary
nTPM: 143.1
2314 Male, age 61, both hemispheres 180.5
2310 Male, age 80, both hemispheres 147.0
2387 Female, age 91, both hemispheres 144.4
2462 Male, age 74, both hemispheres 139.0
1876 Female, age 85, both hemispheres 125.0
2022 Male, age 76, right hemisphere 122.7
Gigantocellular reticular nuclei, pars
nTPM: 151.9
2330 Male, age 80, both hemispheres 159.4
2706 Male, age 80, both hemispheres 158.2
2336 Male, age 61, both hemispheres 156.0
2168 Male, age 76, both hemispheres 143.4
2084 Female, age 85, both hemispheres 142.2
Inferior olive
nTPM: 165.8
2178 Male, age 61, both hemispheres 191.0
2628 Female, age 91, both hemispheres 181.3
2379 Male, age 80, both hemispheres 164.3
2563 Male, age 74, both hemispheres 154.5
2085 Female, age 85, both hemispheres 137.8
Kolliker-Fuse nucleus
nTPM: 154.2
2793 Female, age 91, left hemisphere 179.7
2163 Male, age 80, both hemispheres 144.6
2315 Male, age 76, right hemisphere 138.3
Lateral lemniscal nuclei
nTPM: 139.9
2036 Male, age 80, both hemispheres 146.0
2320 Female, age 91, left hemisphere 145.4
2169 Male, age 76, both hemispheres 141.3
2746 Female, age 85, left hemisphere 135.5
2453 Male, age 74, right hemisphere 131.4
Lateral medullary reticular nucleus
nTPM: 155.5
2374 Male, age 61, both hemispheres 187.5
2852 Male, age 80, both hemispheres 182.2
2804 Female, age 91, both hemispheres 144.4
2044 Male, age 76, both hemispheres 144.1
2190 Female, age 85, both hemispheres 137.9
2305 Male, age 74, both hemispheres 136.8
Lateral parabrachial nucleus
nTPM: 140.7
2790 Male, age 61, both hemispheres 149.1
2013 Male, age 80, both hemispheres 143.2
2792 Male, age 76, both hemispheres 135.4
2139 Female, age 85, right hemisphere 135.3
Lateral vestibular nucleus
nTPM: 165.4
2311 Male, age 80, both hemispheres 171.6
2184 Male, age 76, both hemispheres 159.2
Locus coeruleus
nTPM: 135.4
2720 Male, age 74, both hemispheres 151.2
2162 Male, age 80, both hemispheres 142.4
2123 Female, age 91, both hemispheres 139.2
2317 Female, age 72, unknown 137.2
1980 Male, age 76, both hemispheres 135.5
2014 Male, age 55, unknown 134.2
2788 Male, age 74, unknown 107.8
Medial olivary nucleus
nTPM: 157.9
1943 Male, age 61, both hemispheres 179.2
2851 Male, age 80, both hemispheres 177.9
2138 Female, age 91, both hemispheres 145.5
1962 Male, age 76, both hemispheres 129.2
Medial parabrachial nucleus
nTPM: 145.2
2156 Male, age 61, both hemispheres 151.5
2170 Female, age 91, both hemispheres 147.6
2854 Male, age 80, both hemispheres 147.2
2786 Male, age 76, both hemispheres 143.2
2463 Female, age 85, right hemisphere 136.4
Medial periolivary nuclei
nTPM: 140.3
2458 Female, age 91, both hemispheres 145.2
2081 Male, age 80, both hemispheres 143.7
2171 Female, age 85, both hemispheres 143.0
2063 Male, age 76, both hemispheres 140.0
2791 Male, age 74, right hemisphere 129.7
Medial vestibular nucleus
nTPM: 142.8
2624 Male, age 61, both hemispheres 188.0
2801 Male, age 74, both hemispheres 148.8
2803 Female, age 91, both hemispheres 134.5
2093 Male, age 80, both hemispheres 130.8
2743 Female, age 85, both hemispheres 128.8
2134 Male, age 76, both hemispheres 125.7
Motor facial nucleus
nTPM: 150.3
2697 Female, age 85, both hemispheres 162.1
2795 Female, age 91, both hemispheres 160.3
2126 Male, age 61, both hemispheres 157.8
2327 Male, age 80, both hemispheres 146.3
2062 Male, age 76, both hemispheres 144.0
2365 Male, age 74, right hemisphere 131.4
Motor hypoglossal nucleus
nTPM: 150.3
2182 Male, age 80, both hemispheres 182.4
2461 Male, age 61, both hemispheres 156.2
2125 Female, age 91, both hemispheres 149.8
2132 Female, age 85, both hemispheres 140.3
2277 Male, age 76, both hemispheres 122.6
Motor trigeminal nucleus
nTPM: 142.2
2321 Female, age 91, both hemispheres 149.7
2560 Male, age 74, both hemispheres 148.5
2335 Male, age 61, both hemispheres 139.3
2309 Male, age 76, both hemispheres 138.4
2079 Male, age 80, both hemispheres 135.1
Nuclei of the trapezoid body
nTPM: 141.1
2166 Male, age 80, both hemispheres 150.4
1983 Male, age 76, both hemispheres 141.3
2368 Female, age 91, both hemispheres 140.1
2735 Female, age 85, both hemispheres 137.9
2159 Male, age 61, both hemispheres 135.8
Nucleus ambiguus
nTPM: 163.5
2096 Female, age 85, both hemispheres 188.6
2071 Male, age 76, both hemispheres 138.5
Nucleus cuneatus
nTPM: 157.8
2376 Male, age 61, both hemispheres 172.6
2805 Female, age 91, both hemispheres 169.1
2564 Male, age 74, both hemispheres 164.3
2380 Male, age 80, both hemispheres 161.9
2100 Male, age 76, both hemispheres 159.2
2562 Male, age 61, both hemispheres 153.7
2131 Male, age 76, both hemispheres 149.2
2808 Female, age 85, both hemispheres 148.0
2381 Male, age 80, both hemispheres 142.4
Nucleus gracilis
nTPM: 165.2
2382 Male, age 80, both hemispheres 178.2
2627 Male, age 74, both hemispheres 171.4
2299 Female, age 85, both hemispheres 145.8
Nucleus raphe magnus
nTPM: 146.3
2051 Male, age 76, both hemispheres 160.0
2172 Female, age 85, both hemispheres 157.3
2328 Male, age 80, both hemispheres 150.2
2459 Female, age 91, both hemispheres 144.1
2160 Male, age 61, both hemispheres 137.6
2455 Male, age 74, both hemispheres 128.5
Nucleus raphe obscurus
nTPM: 149.3
2800 Male, age 61, midline 156.0
2845 Female, age 85, midline 146.6
2142 Male, age 76, midline 145.2
Nucleus raphe pallidus
nTPM: 154.2
1924 Male, age 61, midline 166.0
2145 Male, age 76, midline 150.5
2183 Male, age 80, midline 146.0
Nucleus tractus solitarii
nTPM: 127.9
2307 Male, age 80, both hemispheres 159.8
2191 Female, age 85, both hemispheres 139.5
2656 Male, age 76, both hemispheres 125.4
2144 Female, age 91, right hemisphere 87.1
Paramedian reticular nucleus
nTPM: 129.7
2313 Male, age 61, both hemispheres 139.9
2057 Male, age 80, both hemispheres 133.3
2050 Female, age 85, both hemispheres 130.1
2052 Male, age 76, both hemispheres 115.4
Parvicellular reticular nuclei
nTPM: 144.2
2558 Male, age 74, both hemispheres 151.1
2119 Male, age 80, both hemispheres 143.9
2095 Male, age 76, both hemispheres 137.4
Parvicellular reticular nuclei, medullary
nTPM: 142.2
2189 Female, age 91, both hemispheres 146.9
2181 Male, age 80, left hemisphere 141.7
2091 Female, age 85, both hemispheres 138.0
Pedunculopontine tegmental nucleus
nTPM: 122.3
2334 Male, age 80, both hemispheres 134.7
1921 Female, age 85, both hemispheres 119.0
2338 Male, age 61, both hemispheres 113.2
Peritrigeminal nucleus
nTPM: 140.6
2179 Male, age 61, both hemispheres 147.2
2067 Female, age 85, both hemispheres 142.7
2136 Male, age 76, both hemispheres 131.9
Pontine nuclei
nTPM: 144.3
2787 Female, age 85, both hemispheres 174.8
1968 Male, age 76, left hemisphere 161.4
2115 Male, age 80, left hemisphere 155.2
1863 Male, age 55, unknown 152.0
2319 Female, age 91, both hemispheres 135.8
2109 Female, age 72, unknown 133.7
2727 Male, age 61, right hemisphere 122.2
2454 Male, age 74, left hemisphere 119.3
Pontine raphe nucleus
nTPM: 127.3
2853 Male, age 76, midline 127.7
2122 Female, age 85, midline 127.0
Posteroventral cochlear nucleus
nTPM: 135.2
2371 Male, age 61, both hemispheres 153.8
2341 Male, age 80, both hemispheres 136.4
2135 Female, age 91, both hemispheres 135.4
2070 Male, age 76, both hemispheres 132.7
2752 Female, age 85, both hemispheres 117.9
Prepositus hypoglossal nucleus
nTPM: 142.3
2086 Male, age 80, both hemispheres 147.6
2855 Female, age 85, right hemisphere 136.9
Principal sensory trigeminal nucleus
nTPM: 143.5
2324 Male, age 76, both hemispheres 152.0
2367 Female, age 91, left hemisphere 148.5
2158 Male, age 61, both hemispheres 144.1
2008 Male, age 80, left hemisphere 129.1
Reticular pontine nucleus, caudal
nTPM: 145.1
2457 Female, age 91, both hemispheres 153.4
2332 Male, age 80, right hemisphere 147.9
2559 Male, age 74, both hemispheres 140.1
2092 Male, age 76, both hemispheres 139.0
Reticular pontine nucleus, oral
nTPM: 136.6
2366 Female, age 91, both hemispheres 152.0
2167 Male, age 76, both hemispheres 140.8
1939 Male, age 80, both hemispheres 137.2
2012 Female, age 85, both hemispheres 134.8
2361 Male, age 74, both hemispheres 118.3
Reticulotegmental nucleus
nTPM: 143.5
2322 Female, age 91, both hemispheres 153.1
2452 Male, age 74, both hemispheres 147.3
2333 Male, age 80, both hemispheres 143.4
2325 Male, age 76, both hemispheres 130.2
Spinal trigeminal nucleus, caudal
nTPM: 155.1
2390 Female, age 91, both hemispheres 161.2
2308 Male, age 80, both hemispheres 156.3
2312 Male, age 61, both hemispheres 153.9
2447 Male, age 76, both hemispheres 153.3
2642 Male, age 74, both hemispheres 150.8
Spinal trigeminal nucleus, interpolar
nTPM: 140.5
2625 Male, age 61, both hemispheres 168.3
2033 Male, age 80, both hemispheres 147.7
2389 Female, age 91, both hemispheres 143.4
2066 Male, age 76, right hemisphere 122.6
2386 Female, age 85, both hemispheres 120.5
Spinal trigeminal nucleus, oral
nTPM: 134.9
2164 Male, age 80, both hemispheres 160.2
1978 Male, age 76, both hemispheres 127.7
2737 Female, age 85, both hemispheres 116.7
Spinal vestibular nucleus
nTPM: 142.5
2384 Male, age 74, both hemispheres 150.3
2780 Male, age 80, both hemispheres 146.3
2748 Male, age 76, both hemispheres 143.1
2796 Male, age 61, both hemispheres 141.7
2186 Female, age 91, both hemispheres 137.4
2806 Female, age 85, both hemispheres 135.9
Subcoeruleus area
nTPM: 134.4
2451 Male, age 74, both hemispheres 144.0
2089 Male, age 76, left hemisphere 141.9
1958 Male, age 80, both hemispheres 131.6
2323 Female, age 91, left hemisphere 128.4
2369 Female, age 85, left hemisphere 126.0
Superior olive
nTPM: 142.3
2561 Female, age 91, both hemispheres 160.9
2329 Male, age 80, right hemisphere 152.2
1875 Female, age 85, both hemispheres 139.5
2020 Male, age 76, both hemispheres 138.5
2364 Male, age 74, right hemisphere 120.5
Superior vestibular nucleus
nTPM: 140.0
2015 Male, age 80, both hemispheres 150.7
2061 Male, age 76, both hemispheres 140.3
2383 Male, age 74, both hemispheres 129.1
Ventral medullary reticular nucleus
nTPM: 158.9
2372 Male, age 61, both hemispheres 168.2
2060 Male, age 76, both hemispheres 149.7
Ventral periolivary nuclei
nTPM: 142.2
2130 Female, age 85, both hemispheres 156.1
2165 Male, age 80, both hemispheres 150.7
2794 Female, age 91, left hemisphere 140.9
2023 Male, age 76, both hemispheres 121.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 144.7
2180 Male, age 61, both hemispheres 162.7
2118 Male, age 80, both hemispheres 153.3
2302 Female, age 91, both hemispheres 147.4
2741 Female, age 85, both hemispheres 131.1
1986 Male, age 76, both hemispheres 129.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 139.4
2161 Male, age 80, both hemispheres 145.6
2456 Female, age 91, both hemispheres 145.1
1959 Male, age 76, both hemispheres 144.2
2840 Female, age 85, both hemispheres 143.0
2359 Male, age 61, both hemispheres 129.3
2449 Male, age 74, both hemispheres 129.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 87.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 87.1
FF:10182-103D2 60 years, female 94.5
FF:10165-103B3 76 years, female 79.7
Medulla oblongata
Scaled Tags Per Million: 67.7
FF:10038-101F2 18-64 years, mixed 88.2
FF:10155-103A2 76 years, female 71.9
FF:10174-103C3 60 years, female 43.1
Pons
Scaled Tags Per Million: 73.4
FF:10033-101E6 18-54 years, mixed 73.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 25.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 25.5
Samples: 4

Max nTPM: 29.7
Min nTPM: 21.7
Sample A Female 27.5
Sample B Female 23.0
Sample C Male 29.7
Sample D Male 21.7
Pons
nTPM: 23.9
Samples: 4

Max nTPM: 28.6
Min nTPM: 21.5
Sample A Female 28.6
Sample B Female 21.5
Sample C Male 21.7
Sample D Male 23.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 27.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 27.1
Samples: 4

Max nTPM: 30.1
Min nTPM: 24.9
Sample A Male 30.1
Sample B Male 26.2
Sample C Female 27.3
Sample D Female 24.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 2.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.3
2138 Antisense, RP_Baylor_103408, Mouse strain C57BL/6J (56 days, male) 3.6
2137 Antisense, RP_Baylor_103408, Mouse strain C57BL/6J (56 days, male) 3.1
67764933 Antisense, RP_040916_02_E11, Mouse strain C57BL/6J (56 days, male) 0.9
Pons
Expression energy: 2.2
2137 Antisense, RP_Baylor_103408, Mouse strain C57BL/6J (56 days, male) 3.7
2138 Antisense, RP_Baylor_103408, Mouse strain C57BL/6J (56 days, male) 3.7
67764933 Antisense, RP_040916_02_E11, Mouse strain C57BL/6J (56 days, male) 0.6

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