PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:737.6 nTPM
FANTOM5:297.0 Scaled Tags Per Million
Pig:243.5 nTPM
Mouse:63.1 nTPM
Allen mouse:14.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 737.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 562.7
2301 Female, age 85, both hemispheres 677.2
2090 Male, age 80, both hemispheres 637.0
2188 Female, age 91, both hemispheres 623.0
1984 Male, age 76, both hemispheres 313.4
Area postrema
nTPM: 453.4
2306 Male, age 80, both hemispheres 738.8
2799 Male, age 61, both hemispheres 335.9
2054 Male, age 76, both hemispheres 285.4
Dorsal cochlear nucleus
nTPM: 460.5
2187 Female, age 91, both hemispheres 555.1
2378 Male, age 80, both hemispheres 463.6
2802 Male, age 74, right hemisphere 446.7
2370 Male, age 61, both hemispheres 426.1
2058 Male, age 76, both hemispheres 411.0
Dorsal medullary reticular nucleus
nTPM: 530.7
2373 Male, age 61, both hemispheres 584.3
2088 Male, age 76, both hemispheres 548.7
2040 Female, age 85, both hemispheres 459.0
Dorsal motor vagal complex
nTPM: 369.5
2185 Male, age 76, both hemispheres 684.2
2643 Male, age 74, both hemispheres 385.8
2000 Male, age 74, unknown 360.3
2133 Female, age 91, both hemispheres 350.0
2807 Female, age 85, both hemispheres 340.2
2844 Male, age 55, unknown 290.4
2797 Male, age 61, both hemispheres 289.6
2813 Female, age 72, unknown 255.2
Dorsal tegmental nucleus
nTPM: 407.8
2083 Male, age 80, both hemispheres 553.1
2326 Male, age 74, both hemispheres 449.6
1936 Male, age 76, left hemisphere 381.9
2358 Male, age 61, both hemispheres 246.9
Dorsolateral tegmental area
nTPM: 433.7
2751 Female, age 85, both hemispheres 598.5
2654 Male, age 80, both hemispheres 509.4
2337 Male, age 61, both hemispheres 468.4
2360 Male, age 74, both hemispheres 316.5
2141 Male, age 76, both hemispheres 276.0
Gigantocellular reticular nuclei, medullary
nTPM: 512.5
2314 Male, age 61, both hemispheres 829.5
2387 Female, age 91, both hemispheres 512.1
2310 Male, age 80, both hemispheres 502.4
1876 Female, age 85, both hemispheres 481.2
2022 Male, age 76, right hemisphere 396.2
2462 Male, age 74, both hemispheres 353.8
Gigantocellular reticular nuclei, pars
nTPM: 492.0
2336 Male, age 61, both hemispheres 602.5
2330 Male, age 80, both hemispheres 517.2
2706 Male, age 80, both hemispheres 482.5
2084 Female, age 85, both hemispheres 447.6
2168 Male, age 76, both hemispheres 410.3
Inferior olive
nTPM: 531.4
2178 Male, age 61, both hemispheres 742.5
2628 Female, age 91, both hemispheres 523.8
2085 Female, age 85, both hemispheres 487.4
2563 Male, age 74, both hemispheres 476.0
2379 Male, age 80, both hemispheres 427.3
Kolliker-Fuse nucleus
nTPM: 452.3
2793 Female, age 91, left hemisphere 616.2
2163 Male, age 80, both hemispheres 438.9
2315 Male, age 76, right hemisphere 301.9
Lateral lemniscal nuclei
nTPM: 498.9
2320 Female, age 91, left hemisphere 623.9
2746 Female, age 85, left hemisphere 507.0
2036 Male, age 80, both hemispheres 484.4
2453 Male, age 74, right hemisphere 454.8
2169 Male, age 76, both hemispheres 424.2
Lateral medullary reticular nucleus
nTPM: 571.8
2852 Male, age 80, both hemispheres 759.1
2374 Male, age 61, both hemispheres 617.1
2305 Male, age 74, both hemispheres 608.0
2190 Female, age 85, both hemispheres 560.7
2044 Male, age 76, both hemispheres 454.2
2804 Female, age 91, both hemispheres 431.6
Lateral parabrachial nucleus
nTPM: 482.0
2792 Male, age 76, both hemispheres 615.5
2013 Male, age 80, both hemispheres 548.6
2139 Female, age 85, right hemisphere 388.6
2790 Male, age 61, both hemispheres 375.2
Lateral vestibular nucleus
nTPM: 510.1
2311 Male, age 80, both hemispheres 529.8
2184 Male, age 76, both hemispheres 490.4
Locus coeruleus
nTPM: 251.2
2162 Male, age 80, both hemispheres 333.9
2720 Male, age 74, both hemispheres 285.9
2317 Female, age 72, unknown 284.9
2123 Female, age 91, both hemispheres 251.5
2014 Male, age 55, unknown 229.7
1980 Male, age 76, both hemispheres 203.6
2788 Male, age 74, unknown 168.7
Medial olivary nucleus
nTPM: 665.9
1943 Male, age 61, both hemispheres 879.5
1962 Male, age 76, both hemispheres 680.0
2138 Female, age 91, both hemispheres 564.8
2851 Male, age 80, both hemispheres 539.2
Medial parabrachial nucleus
nTPM: 506.8
2170 Female, age 91, both hemispheres 636.8
2463 Female, age 85, right hemisphere 558.8
2786 Male, age 76, both hemispheres 482.5
2854 Male, age 80, both hemispheres 454.9
2156 Male, age 61, both hemispheres 401.2
Medial periolivary nuclei
nTPM: 460.7
2081 Male, age 80, both hemispheres 630.0
2458 Female, age 91, both hemispheres 531.6
2791 Male, age 74, right hemisphere 429.8
2063 Male, age 76, both hemispheres 371.1
2171 Female, age 85, both hemispheres 341.0
Medial vestibular nucleus
nTPM: 425.7
2093 Male, age 80, both hemispheres 494.5
2624 Male, age 61, both hemispheres 490.6
2801 Male, age 74, both hemispheres 481.5
2803 Female, age 91, both hemispheres 460.4
2743 Female, age 85, both hemispheres 367.1
2134 Male, age 76, both hemispheres 260.2
Motor facial nucleus
nTPM: 473.8
2126 Male, age 61, both hemispheres 714.3
2697 Female, age 85, both hemispheres 496.1
2365 Male, age 74, right hemisphere 450.7
2327 Male, age 80, both hemispheres 434.7
2795 Female, age 91, both hemispheres 397.0
2062 Male, age 76, both hemispheres 350.1
Motor hypoglossal nucleus
nTPM: 452.7
2182 Male, age 80, both hemispheres 640.2
2125 Female, age 91, both hemispheres 573.6
2132 Female, age 85, both hemispheres 522.8
2461 Male, age 61, both hemispheres 286.2
2277 Male, age 76, both hemispheres 240.8
Motor trigeminal nucleus
nTPM: 531.8
2321 Female, age 91, both hemispheres 638.6
2560 Male, age 74, both hemispheres 592.4
2309 Male, age 76, both hemispheres 496.8
2079 Male, age 80, both hemispheres 480.0
2335 Male, age 61, both hemispheres 450.9
Nuclei of the trapezoid body
nTPM: 447.5
2166 Male, age 80, both hemispheres 566.5
2159 Male, age 61, both hemispheres 546.0
2368 Female, age 91, both hemispheres 471.9
1983 Male, age 76, both hemispheres 354.1
2735 Female, age 85, both hemispheres 299.1
Nucleus ambiguus
nTPM: 679.7
2096 Female, age 85, both hemispheres 680.8
2071 Male, age 76, both hemispheres 678.6
Nucleus cuneatus
nTPM: 565.2
2380 Male, age 80, both hemispheres 690.5
2100 Male, age 76, both hemispheres 673.3
2376 Male, age 61, both hemispheres 632.2
2808 Female, age 85, both hemispheres 618.6
2381 Male, age 80, both hemispheres 575.9
2564 Male, age 74, both hemispheres 506.8
2131 Male, age 76, both hemispheres 502.2
2805 Female, age 91, both hemispheres 475.6
2562 Male, age 61, both hemispheres 411.6
Nucleus gracilis
nTPM: 651.1
2382 Male, age 80, both hemispheres 790.7
2299 Female, age 85, both hemispheres 622.9
2627 Male, age 74, both hemispheres 539.8
Nucleus raphe magnus
nTPM: 421.8
2459 Female, age 91, both hemispheres 526.7
2328 Male, age 80, both hemispheres 509.2
2051 Male, age 76, both hemispheres 467.5
2455 Male, age 74, both hemispheres 412.5
2160 Male, age 61, both hemispheres 326.6
2172 Female, age 85, both hemispheres 288.6
Nucleus raphe obscurus
nTPM: 737.6
2142 Male, age 76, midline 782.3
2800 Male, age 61, midline 717.0
2845 Female, age 85, midline 713.6
Nucleus raphe pallidus
nTPM: 635.1
2145 Male, age 76, midline 724.2
1924 Male, age 61, midline 645.1
2183 Male, age 80, midline 536.1
Nucleus tractus solitarii
nTPM: 248.9
2307 Male, age 80, both hemispheres 308.0
2656 Male, age 76, both hemispheres 291.4
2191 Female, age 85, both hemispheres 238.5
2144 Female, age 91, right hemisphere 158.0
Paramedian reticular nucleus
nTPM: 433.5
2057 Male, age 80, both hemispheres 519.3
2050 Female, age 85, both hemispheres 409.8
2313 Male, age 61, both hemispheres 405.2
2052 Male, age 76, both hemispheres 399.6
Parvicellular reticular nuclei
nTPM: 516.5
2095 Male, age 76, both hemispheres 542.0
2119 Male, age 80, both hemispheres 526.4
2558 Male, age 74, both hemispheres 481.0
Parvicellular reticular nuclei, medullary
nTPM: 429.4
2189 Female, age 91, both hemispheres 492.3
2091 Female, age 85, both hemispheres 410.9
2181 Male, age 80, left hemisphere 384.9
Pedunculopontine tegmental nucleus
nTPM: 365.3
2334 Male, age 80, both hemispheres 425.1
1921 Female, age 85, both hemispheres 350.1
2338 Male, age 61, both hemispheres 320.7
Peritrigeminal nucleus
nTPM: 525.2
2179 Male, age 61, both hemispheres 563.2
2067 Female, age 85, both hemispheres 533.1
2136 Male, age 76, both hemispheres 479.3
Pontine nuclei
nTPM: 544.5
2454 Male, age 74, left hemisphere 675.1
2319 Female, age 91, both hemispheres 660.5
2115 Male, age 80, left hemisphere 619.9
1968 Male, age 76, left hemisphere 568.0
2109 Female, age 72, unknown 525.7
1863 Male, age 55, unknown 456.7
2727 Male, age 61, right hemisphere 432.0
2787 Female, age 85, both hemispheres 418.0
Pontine raphe nucleus
nTPM: 353.6
2122 Female, age 85, midline 371.6
2853 Male, age 76, midline 335.5
Posteroventral cochlear nucleus
nTPM: 536.5
2135 Female, age 91, both hemispheres 725.3
2070 Male, age 76, both hemispheres 577.6
2341 Male, age 80, both hemispheres 573.1
2371 Male, age 61, both hemispheres 449.5
2752 Female, age 85, both hemispheres 356.9
Prepositus hypoglossal nucleus
nTPM: 419.6
2855 Female, age 85, right hemisphere 510.2
2086 Male, age 80, both hemispheres 329.1
Principal sensory trigeminal nucleus
nTPM: 454.3
2367 Female, age 91, left hemisphere 584.8
2324 Male, age 76, both hemispheres 452.8
2008 Male, age 80, left hemisphere 403.1
2158 Male, age 61, both hemispheres 376.3
Reticular pontine nucleus, caudal
nTPM: 543.7
2559 Male, age 74, both hemispheres 637.7
2457 Female, age 91, both hemispheres 561.9
2092 Male, age 76, both hemispheres 509.3
2332 Male, age 80, right hemisphere 466.0
Reticular pontine nucleus, oral
nTPM: 540.1
2366 Female, age 91, both hemispheres 642.1
2361 Male, age 74, both hemispheres 570.2
2167 Male, age 76, both hemispheres 508.4
1939 Male, age 80, both hemispheres 501.1
2012 Female, age 85, both hemispheres 478.4
Reticulotegmental nucleus
nTPM: 452.5
2452 Male, age 74, both hemispheres 526.9
2322 Female, age 91, both hemispheres 487.5
2333 Male, age 80, both hemispheres 472.8
2325 Male, age 76, both hemispheres 322.6
Spinal trigeminal nucleus, caudal
nTPM: 542.8
2312 Male, age 61, both hemispheres 760.7
2308 Male, age 80, both hemispheres 594.5
2447 Male, age 76, both hemispheres 502.4
2642 Male, age 74, both hemispheres 438.3
2390 Female, age 91, both hemispheres 418.0
Spinal trigeminal nucleus, interpolar
nTPM: 373.7
2033 Male, age 80, both hemispheres 415.7
2389 Female, age 91, both hemispheres 407.1
2386 Female, age 85, both hemispheres 386.2
2066 Male, age 76, right hemisphere 343.5
2625 Male, age 61, both hemispheres 316.1
Spinal trigeminal nucleus, oral
nTPM: 433.5
2164 Male, age 80, both hemispheres 498.2
1978 Male, age 76, both hemispheres 461.1
2737 Female, age 85, both hemispheres 341.0
Spinal vestibular nucleus
nTPM: 502.8
2748 Male, age 76, both hemispheres 648.4
2384 Male, age 74, both hemispheres 571.9
2186 Female, age 91, both hemispheres 507.5
2806 Female, age 85, both hemispheres 471.1
2780 Male, age 80, both hemispheres 456.5
2796 Male, age 61, both hemispheres 361.7
Subcoeruleus area
nTPM: 469.7
2369 Female, age 85, left hemisphere 665.4
2089 Male, age 76, left hemisphere 525.9
2451 Male, age 74, both hemispheres 420.4
1958 Male, age 80, both hemispheres 383.5
2323 Female, age 91, left hemisphere 353.1
Superior olive
nTPM: 497.7
2329 Male, age 80, right hemisphere 584.3
2020 Male, age 76, both hemispheres 545.4
2561 Female, age 91, both hemispheres 508.7
2364 Male, age 74, right hemisphere 472.4
1875 Female, age 85, both hemispheres 377.7
Superior vestibular nucleus
nTPM: 371.3
2015 Male, age 80, both hemispheres 424.2
2061 Male, age 76, both hemispheres 405.0
2383 Male, age 74, both hemispheres 284.7
Ventral medullary reticular nucleus
nTPM: 631.2
2060 Male, age 76, both hemispheres 636.5
2372 Male, age 61, both hemispheres 626.0
Ventral periolivary nuclei
nTPM: 424.6
2023 Male, age 76, both hemispheres 549.3
2165 Male, age 80, both hemispheres 429.6
2794 Female, age 91, left hemisphere 389.2
2130 Female, age 85, both hemispheres 330.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 524.1
2118 Male, age 80, both hemispheres 632.0
2180 Male, age 61, both hemispheres 620.0
1986 Male, age 76, both hemispheres 475.7
2302 Female, age 91, both hemispheres 447.1
2741 Female, age 85, both hemispheres 445.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 469.4
2456 Female, age 91, both hemispheres 587.0
2161 Male, age 80, both hemispheres 498.8
1959 Male, age 76, both hemispheres 452.5
2449 Male, age 74, both hemispheres 448.1
2840 Female, age 85, both hemispheres 435.1
2359 Male, age 61, both hemispheres 394.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 297.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 297.0
FF:10182-103D2 60 years, female 327.1
FF:10165-103B3 76 years, female 267.0
Medulla oblongata
Scaled Tags Per Million: 264.6
FF:10038-101F2 18-64 years, mixed 341.9
FF:10155-103A2 76 years, female 246.4
FF:10174-103C3 60 years, female 205.4
Pons
Scaled Tags Per Million: 250.3
FF:10033-101E6 18-54 years, mixed 250.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 243.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 243.6
Samples: 4

Max nTPM: 280.5
Min nTPM: 187.7
Sample A Female 280.5
Sample B Female 187.7
Sample C Male 275.7
Sample D Male 230.3
Pons
nTPM: 169.2
Samples: 4

Max nTPM: 187.8
Min nTPM: 143.7
Sample A Female 187.8
Sample B Female 143.7
Sample C Male 158.0
Sample D Male 187.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 63.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 63.0
Samples: 4

Max nTPM: 65.4
Min nTPM: 59.7
Sample A Male 65.4
Sample B Male 59.7
Sample C Female 64.2
Sample D Female 62.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 14.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 14.2
69514530 Antisense, RP_050419_03_E11, Mouse strain C57BL/6J (56 days, male) 14.2
Pons
Expression energy: 13.8
69514530 Antisense, RP_050419_03_E11, Mouse strain C57BL/6J (56 days, male) 13.8

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