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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:142.3 nTPM
HPA Brain:260.8 nTPM
GTEx:142.3 nTPM
FANTOM5:513.8 Scaled Tags Per Million
Pig:304.6 nTPM
Mouse:305.5 nTPM
Allen mouse:15.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044605
Glial cells Low
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

260.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 249.1
1857 Female, age 85, left hemisphere 275.5
2290 Female, age 72, unknown 262.3
1781 Male, age 74, unknown 262.1
2288 Male, age 75, left hemisphere 244.0
2289 Male, age 61, right hemisphere 243.9
2481 Female, age 94, left hemisphere 239.0
1854 Male, age 80, left hemisphere 234.7
2846 Female, age 79, unknown 231.3
Globus pallidus, externus
nTPM: 217.2
2646 Male, age 61, right hemisphere 253.8
2772 Female, age 79, unknown 247.4
2567 Female, age 72, unknown 216.7
1996 Male, age 80, right hemisphere 186.2
2395 Male, age 75, both hemispheres 182.0
Globus pallidus, internus
nTPM: 191.2
1818 Male, age 74, unknown 256.6
2483 Female, age 94, right hemisphere 253.3
2037 Male, age 80, right hemisphere 195.6
2287 Male, age 75, right hemisphere 193.4
2566 Female, age 72, unknown 189.7
2111 Female, age 85, right hemisphere 128.4
2778 Female, age 91, both hemispheres 121.1
Nucleus accumbens
nTPM: 252.3
1856 Female, age 91, right hemisphere 349.4
2824 Male, age 61, right hemisphere 321.5
1806 Female, age 85, left hemisphere 279.2
1783 Male, age 74, unknown 278.0
2698 Female, age 72, unknown 235.0
2286 Male, age 75, left hemisphere 232.2
2732 Male, age 80, right hemisphere 183.4
2391 Female, age 94, left hemisphere 140.0
Nucleus basalis of Meynert
nTPM: 249.2
2569 Male, age 61, both hemispheres 277.9
2484 Female, age 94, left hemisphere 271.7
2393 Male, age 80, right hemisphere 232.4
2821 Male, age 75, both hemispheres 215.0
Nucleus of the diagonal band
nTPM: 243.7
1812 Female, age 91, both hemispheres 277.8
1979 Male, age 74, unknown 262.9
2775 Male, age 80, right hemisphere 243.0
2029 Male, age 61, right hemisphere 223.5
2195 Female, age 85, both hemispheres 211.1
Putamen
nTPM: 257.8
2647 Male, age 75, left hemisphere 323.8
1838 Male, age 80, right hemisphere 280.5
1937 Female, age 91, right hemisphere 263.5
2466 Female, age 79, unknown 242.2
2489 Female, age 72, unknown 239.3
1829 Male, age 74, unknown 237.7
2482 Female, age 94, left hemisphere 217.8
Septal nuclei
nTPM: 228.4
2394 Male, age 61, left hemisphere 252.6
2199 Male, age 80, right hemisphere 238.8
1960 Male, age 74, unknown 234.5
2059 Female, age 85, both hemispheres 229.3
2009 Female, age 91, both hemispheres 220.0
2629 Female, age 94, right hemisphere 213.6
2031 Female, age 72, unknown 209.7
Stria terminalis, bed nucleus
nTPM: 260.8
2201 Male, age 74, unknown 280.3
1974 Female, age 91, both hemispheres 267.8
2486 Female, age 94, both hemispheres 234.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

142.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 110.5
Samples: 246

Max nTPM: 163.1
Min nTPM: 46.7
Std nTPM: 24.9
Median nTPM: 112.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 163.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 162.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 160.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 156.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 156.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 155.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 153.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 153.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 153.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 152.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 151.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 150.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 149.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 149.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 149.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 148.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 148.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 147.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 145.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 145.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 144.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 144.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 143.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 143.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 141.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 141.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 140.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 140.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 140.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 140.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 139.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 139.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 139.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 139.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 138.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 137.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 137.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 137.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 136.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 136.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 136.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 135.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 135.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 133.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 133.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 133.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 133.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 133.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 132.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 132.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 132.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 131.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 131.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 130.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 130.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 129.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 129.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 129.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 129.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 129.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 129.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 129.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 129.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 128.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 127.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 127.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 127.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 126.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 126.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 126.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 126.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 126.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 126.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 125.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 125.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 125.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 125.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 124.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 124.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 124.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 123.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 123.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 122.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 122.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 122.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 121.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 121.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 121.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 120.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 120.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 119.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 119.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 119.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 119.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 119.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 119.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 119.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 118.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 118.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 118.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 118.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 118.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 117.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 117.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 117.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 117.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 117.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 116.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 116.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 115.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 115.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 114.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 114.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 114.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 113.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 113.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 113.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 112.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 112.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 112.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 112.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 112.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 112.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 112.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 111.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 111.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 111.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 110.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 110.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 110.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 110.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 110.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 110.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 109.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 109.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 109.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 109.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 109.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 109.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 108.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 108.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 108.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 107.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 107.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 107.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 107.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 106.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 106.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 106.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 106.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 104.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 104.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 104.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 104.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 104.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 103.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 102.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 102.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 101.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 101.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 101.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 101.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 100.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 100.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 100.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 99.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 98.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 97.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 97.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 97.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 97.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 97.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 96.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 96.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 95.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 95.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 95.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 95.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 94.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 94.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 94.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 94.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 93.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 93.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 92.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 92.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 92.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 92.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 92.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 91.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 91.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 90.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 89.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 89.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 88.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 88.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 88.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 88.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 88.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 88.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 87.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 87.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 86.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 86.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 86.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 86.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 86.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 86.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 85.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 85.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 85.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 84.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 82.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 81.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 79.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 78.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 78.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 77.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 76.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 76.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 76.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 76.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 76.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 75.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 75.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 73.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 72.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 72.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 71.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 71.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 69.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 68.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 68.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 65.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 61.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 61.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 60.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 60.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 59.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 56.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 55.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 55.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 53.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 53.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 52.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 46.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 142.3
Samples: 246

Max nTPM: 254.6
Min nTPM: 26.7
Std nTPM: 39.3
Median nTPM: 146.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 254.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 230.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 223.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 219.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 217.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 213.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 211.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 208.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 206.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 205.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 204.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 203.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 202.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 202.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 199.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 199.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 196.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 196.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 196.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 195.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 194.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 192.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 192.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 191.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 190.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 190.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 188.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 188.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 188.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 187.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 186.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 186.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 183.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 183.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 182.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 182.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 182.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 182.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 182.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 181.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 180.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 180.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 179.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 179.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 178.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 178.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 177.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 176.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 176.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 176.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 175.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 175.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 174.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 174.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 173.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 173.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 173.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 172.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 171.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 171.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 171.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 171.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 170.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 170.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 169.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 169.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 168.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 168.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 168.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 168.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 168.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 168.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 168.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 166.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 166.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 166.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 165.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 164.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 164.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 164.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 164.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 163.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 163.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 162.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 162.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 160.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 160.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 159.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 158.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 157.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 157.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 157.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 156.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 156.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 155.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 155.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 155.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 154.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 154.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 153.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 152.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 152.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 152.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 152.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 152.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 151.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 151.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 151.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 151.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 151.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 151.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 150.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 150.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 149.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 148.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 148.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 148.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 147.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 147.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 147.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 147.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 146.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 146.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 146.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 145.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 145.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 145.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 144.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 144.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 143.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 142.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 140.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 139.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 139.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 138.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 138.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 137.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 137.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 136.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 135.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 135.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 134.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 134.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 134.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 134.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 133.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 133.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 132.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 132.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 132.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 132.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 132.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 131.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 131.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 131.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 131.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 130.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 130.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 129.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 129.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 128.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 127.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 127.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 127.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 127.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 127.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 126.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 125.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 124.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 124.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 123.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 123.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 123.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 123.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 122.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 122.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 120.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 120.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 119.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 119.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 117.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 117.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 116.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 116.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 115.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 115.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 115.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 115.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 112.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 112.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 110.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 110.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 110.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 109.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 106.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 106.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 106.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 106.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 106.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 105.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 104.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 102.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 102.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 101.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 101.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 100.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 97.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 97.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 96.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 95.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 95.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 94.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 94.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 94.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 93.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 93.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 93.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 91.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 91.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 91.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 90.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 90.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 89.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 88.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 87.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 85.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 83.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 83.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 82.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 78.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 77.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 77.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 75.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 73.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 72.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 69.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 68.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 67.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 67.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 67.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 66.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 63.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 62.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 55.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 32.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 26.7
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Brain - Putamen (basal ganglia)
Average nTPM: 110.9
Samples: 205

Max nTPM: 196.2
Min nTPM: 45.4
Std nTPM: 25.5
Median nTPM: 112.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 196.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 165.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 159.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 156.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 156.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 153.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 153.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 152.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 150.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 150.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 149.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 148.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 145.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 144.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 144.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 144.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 144.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 143.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 143.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 142.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 141.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 140.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 140.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 139.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 139.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 139.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 139.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 138.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 138.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 138.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 137.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 137.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 136.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 136.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 136.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 135.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 135.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 135.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 135.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 135.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 134.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 134.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 133.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 132.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 132.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 132.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 131.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 131.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 130.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 129.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 128.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 128.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 128.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 128.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 128.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 127.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 127.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 127.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 127.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 127.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 126.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 126.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 125.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 125.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 125.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 125.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 123.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 123.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 123.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 123.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 123.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 122.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 122.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 122.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 121.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 121.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 120.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 119.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 119.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 119.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 118.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 118.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 118.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 118.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 117.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 117.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 117.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 117.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 116.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 115.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 115.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 115.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 115.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 114.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 114.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 114.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 114.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 113.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 113.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 113.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 112.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 112.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 112.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 112.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 112.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 112.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 111.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 110.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 110.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 110.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 109.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 108.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 108.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 107.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 107.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 107.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 107.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 107.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 107.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 107.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 106.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 106.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 105.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 105.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 105.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 105.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 104.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 104.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 104.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 104.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 104.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 104.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 104.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 104.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 104.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 102.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 101.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 100.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 100.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 99.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 99.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 99.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 98.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 97.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 97.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 96.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 96.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 95.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 95.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 95.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 95.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 95.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 95.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 94.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 94.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 93.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 93.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 92.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 92.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 91.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 91.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 91.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 90.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 90.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 90.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 90.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 90.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 89.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 87.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 86.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 86.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 85.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 85.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 85.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 84.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 83.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 82.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 80.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 80.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 79.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 78.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 78.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 77.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 76.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 75.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 75.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 73.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 73.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 72.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 72.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 71.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 70.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 68.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 66.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 66.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 65.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 62.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 62.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 59.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 57.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 54.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 50.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 46.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 46.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 45.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

513.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 371.3
FF:10164-103B2 76 years, female 371.3
Nucleus accumbens
Scaled Tags Per Million: 326.9
FF:10037-101F1 23-56 years, mixed 326.9
Putamen
Scaled Tags Per Million: 513.8
FF:10176-103C5 60 years, female 513.8
Globus pallidus
Scaled Tags Per Million: 175.7
FF:10175-103C4 60 years, female 259.7
FF:10161-103A8 76 years, female 91.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

304.6
Pig sample Sample description nTPM
Caudate
nTPM: 304.6
Samples: 4

Max nTPM: 378.6
Min nTPM: 236.9
Sample A Female 236.9
Sample B Female 299.3
Sample C Male 378.6
Sample D Male 303.7
Putamen
nTPM: 257.7
Samples: 4

Max nTPM: 317.1
Min nTPM: 178.6
Sample A Female 178.6
Sample B Female 227.7
Sample C Male 317.1
Sample D Male 307.2
Septum
nTPM: 245.5
Samples: 4

Max nTPM: 308.1
Min nTPM: 199.5
Sample A Female 241.2
Sample B Female 233.2
Sample C Male 308.1
Sample D Male 199.5
Ventral pallidum
nTPM: 253.1
Samples: 4

Max nTPM: 330.1
Min nTPM: 187.1
Sample A Female 263.4
Sample B Female 187.1
Sample C Male 330.1
Sample D Male 231.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

305.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 266.6
Samples: 4

Max nTPM: 269.9
Min nTPM: 263.1
Sample A Male 263.1
Sample B Male 264.6
Sample C Female 269.9
Sample D Female 268.9
Septum
nTPM: 288.5
Samples: 4

Max nTPM: 310.4
Min nTPM: 271.7
Sample A Male 310.4
Sample B Male 271.7
Sample C Female 284.8
Sample D Female 286.9
Ventral forebrain
nTPM: 305.5
Samples: 4

Max nTPM: 337.3
Min nTPM: 278.0
Sample A Male 278.0
Sample B Male 337.3
Sample C Female 295.0
Sample D Female 311.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 14.3
69262230 Antisense, RP_050301_01_F10, Mouse strain C57BL/6J (56 days, male) 21.3
70812774 Antisense, RP_050712_02_E12, Mouse strain C57BL/6J (56 days, male) 7.2
Pallidum
Expression energy: 15.7
69262230 Antisense, RP_050301_01_F10, Mouse strain C57BL/6J (56 days, male) 22.5
70812774 Antisense, RP_050712_02_E12, Mouse strain C57BL/6J (56 days, male) 9.0

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