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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:48.5 nTPM
HPA Brain:35.6 nTPM
GTEx:48.5 nTPM
FANTOM5:55.9 Scaled Tags Per Million
Pig:25.7 nTPM
Mouse:26.7 nTPM
Allen mouse:22.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041264Antibody HPA041271Antibody CAB000002Antibody CAB003761Antibody CAB013531
Glial cells Not detectedNot detectedNot detectedNot detectedNot detected
Neuronal cells LowNot detectedNot detectedNot detectedNot detected











BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 16.4
2481 Female, age 94, left hemisphere 21.8
2846 Female, age 79, unknown 20.8
2289 Male, age 61, right hemisphere 16.6
2290 Female, age 72, unknown 15.9
1854 Male, age 80, left hemisphere 14.9
1781 Male, age 74, unknown 14.7
1857 Female, age 85, left hemisphere 13.8
2288 Male, age 75, left hemisphere 12.6
Globus pallidus, externus
nTPM: 17.2
1996 Male, age 80, right hemisphere 21.1
2395 Male, age 75, both hemispheres 19.0
2772 Female, age 79, unknown 17.9
2567 Female, age 72, unknown 14.0
2646 Male, age 61, right hemisphere 13.8
Globus pallidus, internus
nTPM: 17.2
2483 Female, age 94, right hemisphere 22.9
2037 Male, age 80, right hemisphere 20.5
2778 Female, age 91, both hemispheres 20.1
2287 Male, age 75, right hemisphere 15.7
1818 Male, age 74, unknown 15.6
2566 Female, age 72, unknown 13.5
2111 Female, age 85, right hemisphere 12.5
Nucleus accumbens
nTPM: 15.6
1806 Female, age 85, left hemisphere 17.1
1856 Female, age 91, right hemisphere 17.0
2732 Male, age 80, right hemisphere 16.8
1783 Male, age 74, unknown 16.3
2698 Female, age 72, unknown 16.3
2391 Female, age 94, left hemisphere 15.2
2286 Male, age 75, left hemisphere 13.6
2824 Male, age 61, right hemisphere 12.7
Nucleus basalis of Meynert
nTPM: 35.6
2821 Male, age 75, both hemispheres 87.7
2393 Male, age 80, right hemisphere 19.0
2569 Male, age 61, both hemispheres 18.0
2484 Female, age 94, left hemisphere 17.8
Nucleus of the diagonal band
nTPM: 15.8
2029 Male, age 61, right hemisphere 21.2
1812 Female, age 91, both hemispheres 15.2
2195 Female, age 85, both hemispheres 14.8
1979 Male, age 74, unknown 14.2
2775 Male, age 80, right hemisphere 13.5
Putamen
nTPM: 18.9
2482 Female, age 94, left hemisphere 29.8
2489 Female, age 72, unknown 26.0
2647 Male, age 75, left hemisphere 17.5
1838 Male, age 80, right hemisphere 14.9
2466 Female, age 79, unknown 14.9
1937 Female, age 91, right hemisphere 14.7
1829 Male, age 74, unknown 14.3
Septal nuclei
nTPM: 19.1
2031 Female, age 72, unknown 41.5
2394 Male, age 61, left hemisphere 16.8
2199 Male, age 80, right hemisphere 16.5
1960 Male, age 74, unknown 15.4
2059 Female, age 85, both hemispheres 15.4
2009 Female, age 91, both hemispheres 14.0
2629 Female, age 94, right hemisphere 13.9
Stria terminalis, bed nucleus
nTPM: 12.4
1974 Female, age 91, both hemispheres 14.2
2201 Male, age 74, unknown 11.8
2486 Female, age 94, both hemispheres 11.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 37.4
Samples: 246

Max nTPM: 141.8
Min nTPM: 8.6
Std nTPM: 22.1
Median nTPM: 32.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 141.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 108.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 106.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 105.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 103.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 102.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 97.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 94.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 91.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 88.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 85.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 84.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 83.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 82.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 79.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 78.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 78.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 76.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 75.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 74.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 73.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 68.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 66.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 66.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 66.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 65.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 64.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 63.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 63.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 63.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 62.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 62.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 62.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 60.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 60.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 59.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 58.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 57.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 56.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 55.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 54.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 54.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 53.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 53.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 52.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 52.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 52.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 52.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 52.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 52.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 51.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 51.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 51.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 51.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 50.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 50.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 50.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 49.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 48.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 48.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 47.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 47.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 46.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 46.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 46.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 45.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 45.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 45.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 45.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 44.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 44.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 43.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 43.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 43.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 42.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 42.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 42.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 42.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 41.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 40.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 40.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 39.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 39.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 39.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 39.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 39.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 39.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 38.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 38.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 38.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 38.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 38.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 38.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 37.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 37.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 37.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 37.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 37.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 36.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 36.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 36.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 36.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 35.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 35.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 35.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 35.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 35.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 35.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 34.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 34.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 33.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 33.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 33.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 32.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 32.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 32.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 32.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 32.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 32.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 32.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 32.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 32.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 32.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 31.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 31.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 31.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 31.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 31.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 31.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 31.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 31.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 31.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 31.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 30.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 30.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 30.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 30.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 30.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 30.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 30.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 29.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 29.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 29.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 28.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 28.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 28.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 27.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 27.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 27.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 27.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 27.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 26.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 26.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 26.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 26.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 26.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 26.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 26.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 25.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 25.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 25.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 25.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 25.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 24.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 24.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 24.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 24.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 24.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 24.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 23.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 23.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 23.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 23.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 23.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 22.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 22.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 22.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 22.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 21.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 21.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 21.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 21.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 21.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 20.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 20.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 20.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 20.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 20.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 20.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 20.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 20.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 20.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 20.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 20.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 20.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 19.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 19.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 19.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 19.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 19.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 19.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 19.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 19.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 18.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 18.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 18.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 17.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 17.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 17.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 17.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 17.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 17.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 17.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 16.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 16.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 16.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 16.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 16.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 15.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 15.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 15.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 14.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 14.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 14.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 13.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 13.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 13.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 13.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 13.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 13.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 12.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 12.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 12.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 11.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 11.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 11.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 10.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 10.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 9.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 9.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 9.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 9.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 9.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 8.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 8.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 33.0
Samples: 246

Max nTPM: 239.8
Min nTPM: 7.0
Std nTPM: 26.3
Median nTPM: 25.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 239.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 164.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 142.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 133.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 128.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 94.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 86.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 82.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 80.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 77.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 76.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 75.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 72.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 70.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 70.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 70.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 68.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 68.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 68.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 67.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 67.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 66.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 66.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 65.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 62.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 61.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 61.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 61.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 60.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 60.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 59.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 58.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 57.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 57.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 57.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 56.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 56.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 55.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 55.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 52.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 52.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 51.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 50.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 50.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 49.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 48.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 47.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 46.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 45.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 44.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 44.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 43.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 43.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 42.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 41.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 41.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 40.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 40.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 40.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 39.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 39.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 38.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 38.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 38.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 37.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 36.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 36.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 36.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 36.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 35.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 35.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 34.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 34.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 34.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 33.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 33.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 32.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 32.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 32.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 32.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 32.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 32.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 32.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 32.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 31.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 31.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 31.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 31.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 30.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 30.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 30.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 30.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 30.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 30.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 30.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 30.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 29.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 29.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 29.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 28.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 28.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 28.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 28.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 28.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 28.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 27.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 27.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 27.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 27.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 27.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 27.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 26.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 26.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 26.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 26.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 26.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 26.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 26.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 26.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 26.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 26.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 25.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 25.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 25.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 25.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 25.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 25.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 25.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 24.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 24.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 24.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 24.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 24.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 23.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 23.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 23.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 23.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 23.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 22.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 22.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 22.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 22.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 22.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 22.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 22.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 21.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 21.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 21.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 21.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 21.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 21.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 21.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 21.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 21.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 21.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 20.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 20.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 20.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 20.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 20.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 20.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 20.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 20.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 20.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 20.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 19.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 19.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 19.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 19.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 19.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 19.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 19.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 19.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 19.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 19.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 18.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 18.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 18.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 18.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 18.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 18.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 17.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 17.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 17.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 17.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 16.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 16.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 16.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 16.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 16.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 16.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 16.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 16.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 16.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 16.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 16.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 15.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 15.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 15.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 15.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 15.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 15.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 15.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 15.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 15.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 14.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 14.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 14.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 14.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 14.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 14.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 14.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 14.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 13.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 13.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 13.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 13.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 13.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 13.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 13.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 13.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 13.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 12.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 12.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 12.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 12.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 12.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 12.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 11.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 11.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 11.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 11.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 10.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 10.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 10.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 10.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 10.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 9.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 9.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 9.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 9.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 9.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 8.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 8.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 8.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 7.0
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Brain - Putamen (basal ganglia)
Average nTPM: 48.5
Samples: 205

Max nTPM: 378.0
Min nTPM: 8.1
Std nTPM: 41.0
Median nTPM: 36.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 378.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 206.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 187.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 174.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 170.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 169.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 166.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 156.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 129.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 126.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 111.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 109.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 107.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 97.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 95.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 95.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 94.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 94.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 92.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 91.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 88.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 88.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 88.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 87.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 85.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 82.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 81.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 81.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 80.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 79.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 78.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 74.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 74.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 71.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 70.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 68.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 68.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 65.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 64.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 63.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 63.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 63.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 62.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 60.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 58.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 58.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 58.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 57.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 57.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 56.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 55.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 54.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 54.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 54.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 54.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 53.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 53.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 53.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 52.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 52.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 52.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 51.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 51.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 50.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 50.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 49.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 49.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 47.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 46.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 45.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 45.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 45.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 44.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 44.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 44.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 44.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 44.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 43.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 43.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 43.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 43.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 43.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 42.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 42.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 42.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 42.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 42.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 42.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 42.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 41.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 41.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 41.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 41.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 40.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 39.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 38.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 38.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 38.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 38.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 37.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 37.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 37.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 36.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 36.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 36.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 35.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 35.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 34.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 34.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 34.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 33.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 33.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 33.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 33.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 33.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 33.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 33.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 32.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 32.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 32.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 32.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 32.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 32.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 32.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 32.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 31.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 31.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 31.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 30.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 30.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 30.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 30.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 30.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 30.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 30.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 29.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 29.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 29.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 29.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 29.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 29.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 28.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 28.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 28.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 28.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 28.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 27.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 27.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 27.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 27.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 27.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 26.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 26.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 25.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 25.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 25.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 24.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 24.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 24.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 23.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 23.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 23.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 23.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 23.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 22.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 22.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 22.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 22.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 21.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 21.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 21.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 20.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 20.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 19.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 19.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 19.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 19.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 18.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 18.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 18.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 17.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 17.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 17.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 17.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 17.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 17.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 17.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 17.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 17.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 16.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 16.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 16.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 16.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 16.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 16.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 15.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 15.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 14.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 14.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 13.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 13.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 11.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 9.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 8.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 8.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

55.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 11.1
FF:10164-103B2 76 years, female 11.1
Nucleus accumbens
Scaled Tags Per Million: 55.9
FF:10037-101F1 23-56 years, mixed 55.9
Putamen
Scaled Tags Per Million: 7.3
FF:10176-103C5 60 years, female 7.3
Globus pallidus
Scaled Tags Per Million: 13.8
FF:10161-103A8 76 years, female 17.5
FF:10175-103C4 60 years, female 10.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.7
Pig sample Sample description nTPM
Caudate
nTPM: 8.8
Samples: 4

Max nTPM: 11.7
Min nTPM: 6.6
Sample A Female 9.4
Sample B Female 6.6
Sample C Male 7.3
Sample D Male 11.7
Putamen
nTPM: 7.8
Samples: 4

Max nTPM: 12.6
Min nTPM: 5.1
Sample A Female 6.4
Sample B Female 5.1
Sample C Male 12.6
Sample D Male 6.9
Septum
nTPM: 25.7
Samples: 4

Max nTPM: 62.2
Min nTPM: 3.5
Sample A Female 62.2
Sample B Female 12.1
Sample C Male 25.0
Sample D Male 3.5
Ventral pallidum
nTPM: 9.6
Samples: 4

Max nTPM: 19.4
Min nTPM: 3.9
Sample A Female 4.3
Sample B Female 19.4
Sample C Male 10.8
Sample D Male 3.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 18.4
Samples: 4

Max nTPM: 21.4
Min nTPM: 15.8
Sample A Male 17.4
Sample B Male 21.4
Sample C Female 15.8
Sample D Female 19.0
Septum
nTPM: 21.6
Samples: 4

Max nTPM: 36.4
Min nTPM: 14.7
Sample A Male 36.4
Sample B Male 14.7
Sample C Female 17.3
Sample D Female 18.1
Ventral forebrain
nTPM: 26.7
Samples: 4

Max nTPM: 47.4
Min nTPM: 10.9
Sample A Male 10.9
Sample B Male 36.0
Sample C Female 47.4
Sample D Female 12.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

22.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 22.1
68743877 Antisense, RP_050203_01_G07, Mouse strain C57BL/6J (56 days, male) 22.1
Pallidum
Expression energy: 18.4
68743877 Antisense, RP_050203_01_G07, Mouse strain C57BL/6J (56 days, male) 18.4

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