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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:108.7 nTPM
HPA Brain:166.2 nTPM
GTEx:108.7 nTPM
FANTOM5:81.3 Scaled Tags Per Million
Pig:90.1 nTPM
Mouse:29.1 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA009163Antibody HPA009269
Glial cells LowMedium
Neuronal cells LowMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

166.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 60.0
2288 Male, age 75, left hemisphere 80.8
2846 Female, age 79, unknown 67.3
2290 Female, age 72, unknown 64.1
1781 Male, age 74, unknown 59.1
1857 Female, age 85, left hemisphere 57.3
1854 Male, age 80, left hemisphere 55.0
2481 Female, age 94, left hemisphere 48.9
2289 Male, age 61, right hemisphere 47.5
Globus pallidus, externus
nTPM: 166.2
2646 Male, age 61, right hemisphere 211.3
1996 Male, age 80, right hemisphere 184.9
2567 Female, age 72, unknown 164.7
2772 Female, age 79, unknown 145.5
2395 Male, age 75, both hemispheres 124.5
Globus pallidus, internus
nTPM: 159.5
2287 Male, age 75, right hemisphere 184.8
2111 Female, age 85, right hemisphere 174.9
2566 Female, age 72, unknown 174.6
2778 Female, age 91, both hemispheres 167.9
2037 Male, age 80, right hemisphere 158.4
1818 Male, age 74, unknown 137.8
2483 Female, age 94, right hemisphere 118.4
Nucleus accumbens
nTPM: 72.6
2391 Female, age 94, left hemisphere 117.3
2698 Female, age 72, unknown 106.2
2732 Male, age 80, right hemisphere 74.3
2286 Male, age 75, left hemisphere 71.1
1806 Female, age 85, left hemisphere 69.0
1783 Male, age 74, unknown 59.1
2824 Male, age 61, right hemisphere 45.1
1856 Female, age 91, right hemisphere 38.4
Nucleus basalis of Meynert
nTPM: 106.1
2569 Male, age 61, both hemispheres 203.6
2821 Male, age 75, both hemispheres 103.9
2484 Female, age 94, left hemisphere 60.2
2393 Male, age 80, right hemisphere 56.5
Nucleus of the diagonal band
nTPM: 47.2
1812 Female, age 91, both hemispheres 55.5
1979 Male, age 74, unknown 55.5
2195 Female, age 85, both hemispheres 55.5
2775 Male, age 80, right hemisphere 38.6
2029 Male, age 61, right hemisphere 30.9
Putamen
nTPM: 66.4
2647 Male, age 75, left hemisphere 103.8
1829 Male, age 74, unknown 81.3
2489 Female, age 72, unknown 73.9
2482 Female, age 94, left hemisphere 61.7
1937 Female, age 91, right hemisphere 55.6
2466 Female, age 79, unknown 47.9
1838 Male, age 80, right hemisphere 40.5
Septal nuclei
nTPM: 56.8
2394 Male, age 61, left hemisphere 75.8
2059 Female, age 85, both hemispheres 73.5
2199 Male, age 80, right hemisphere 66.3
2629 Female, age 94, right hemisphere 59.6
2009 Female, age 91, both hemispheres 44.5
1960 Male, age 74, unknown 39.4
2031 Female, age 72, unknown 38.5
Stria terminalis, bed nucleus
nTPM: 47.8
2201 Male, age 74, unknown 63.2
1974 Female, age 91, both hemispheres 47.5
2486 Female, age 94, both hemispheres 32.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 80.1
Samples: 246

Max nTPM: 214.4
Min nTPM: 21.3
Std nTPM: 33.2
Median nTPM: 72.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 214.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 202.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 192.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 191.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 181.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 178.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 178.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 168.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 162.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 156.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 151.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 149.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 140.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 140.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 138.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 137.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 136.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 133.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 132.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 131.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 127.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 127.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 126.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 122.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 122.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 120.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 119.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 116.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 116.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 115.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 114.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 113.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 113.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 112.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 112.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 112.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 111.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 109.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 108.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 108.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 108.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 107.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 107.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 105.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 104.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 102.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 102.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 102.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 101.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 101.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 101.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 100.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 100.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 100.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 100.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 99.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 98.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 98.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 98.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 97.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 96.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 96.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 96.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 95.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 95.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 94.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 94.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 93.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 93.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 93.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 92.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 92.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 92.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 92.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 91.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 91.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 90.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 90.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 89.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 89.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 88.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 87.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 87.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 87.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 86.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 86.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 85.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 85.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 85.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 85.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 84.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 83.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 82.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 82.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 82.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 81.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 81.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 80.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 80.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 80.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 79.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 79.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 79.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 78.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 78.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 78.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 78.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 78.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 77.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 77.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 77.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 76.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 76.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 76.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 75.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 75.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 75.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 75.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 73.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 73.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 73.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 73.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 72.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 71.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 71.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 70.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 70.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 69.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 69.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 69.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 69.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 68.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 68.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 67.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 67.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 67.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 67.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 67.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 67.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 66.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 66.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 66.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 66.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 66.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 66.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 65.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 65.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 65.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 64.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 64.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 63.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 63.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 63.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 63.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 62.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 62.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 62.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 62.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 62.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 62.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 62.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 61.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 61.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 61.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 61.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 61.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 61.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 60.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 60.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 60.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 60.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 59.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 59.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 59.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 59.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 58.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 58.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 57.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 57.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 57.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 56.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 56.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 56.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 55.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 55.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 55.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 55.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 55.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 54.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 54.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 54.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 54.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 53.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 53.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 53.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 53.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 53.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 53.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 53.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 53.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 53.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 52.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 52.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 52.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 51.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 51.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 51.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 50.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 50.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 50.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 50.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 49.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 49.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 49.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 49.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 48.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 48.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 48.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 47.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 47.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 47.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 47.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 46.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 46.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 45.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 45.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 44.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 44.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 44.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 44.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 43.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 43.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 42.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 40.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 40.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 40.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 39.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 39.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 37.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 36.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 36.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 36.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 35.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 33.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 27.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 21.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 81.4
Samples: 246

Max nTPM: 255.2
Min nTPM: 14.2
Std nTPM: 41.0
Median nTPM: 68.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 255.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 245.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 244.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 216.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 214.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 205.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 199.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 181.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 178.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 177.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 174.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 167.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 166.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 165.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 162.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 158.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 146.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 144.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 141.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 140.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 140.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 138.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 135.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 133.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 132.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 131.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 131.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 131.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 130.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 129.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 128.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 127.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 126.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 126.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 125.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 122.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 119.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 118.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 118.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 116.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 115.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 115.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 115.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 115.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 114.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 114.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 113.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 111.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 111.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 111.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 108.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 108.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 108.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 107.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 104.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 102.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 102.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 101.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 101.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 100.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 100.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 99.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 98.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 98.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 96.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 96.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 96.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 96.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 93.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 91.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 90.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 90.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 90.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 89.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 89.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 86.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 86.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 85.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 85.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 85.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 84.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 84.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 83.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 83.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 83.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 83.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 82.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 82.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 81.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 81.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 80.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 80.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 79.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 78.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 78.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 78.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 77.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 77.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 76.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 76.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 76.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 75.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 75.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 75.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 75.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 74.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 74.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 73.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 73.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 73.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 72.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 72.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 71.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 71.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 71.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 71.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 71.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 70.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 69.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 69.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 69.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 68.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 68.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 68.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 68.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 68.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 67.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 67.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 67.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 66.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 66.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 66.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 66.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 66.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 65.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 65.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 63.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 63.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 63.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 62.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 62.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 62.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 62.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 61.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 61.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 61.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 61.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 61.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 61.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 61.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 60.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 60.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 60.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 60.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 60.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 59.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 59.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 57.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 57.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 57.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 57.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 57.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 57.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 56.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 56.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 56.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 56.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 56.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 56.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 56.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 55.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 55.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 55.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 55.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 55.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 54.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 54.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 54.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 53.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 53.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 53.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 53.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 53.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 53.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 52.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 52.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 52.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 52.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 51.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 51.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 51.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 51.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 51.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 51.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 51.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 50.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 50.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 50.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 50.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 50.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 50.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 49.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 49.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 49.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 49.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 49.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 48.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 48.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 48.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 48.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 48.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 48.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 47.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 47.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 47.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 47.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 46.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 46.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 46.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 45.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 45.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 45.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 44.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 44.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 44.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 44.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 43.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 43.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 43.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 42.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 42.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 42.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 41.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 41.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 41.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 39.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 38.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 37.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 36.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 36.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 35.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 34.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 34.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 33.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 31.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 14.2
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Brain - Putamen (basal ganglia)
Average nTPM: 108.7
Samples: 205

Max nTPM: 368.0
Min nTPM: 25.6
Std nTPM: 49.7
Median nTPM: 102.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 368.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 315.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 304.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 288.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 245.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 235.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 229.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 228.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 221.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 208.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 204.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 200.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 198.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 196.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 196.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 194.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 175.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 171.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 170.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 169.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 167.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 164.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 157.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 152.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 151.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 148.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 147.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 144.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 143.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 141.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 139.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 139.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 139.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 138.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 137.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 137.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 136.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 136.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 135.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 133.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 131.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 129.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 128.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 128.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 127.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 126.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 125.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 124.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 124.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 124.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 124.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 123.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 122.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 122.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 121.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 120.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 120.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 119.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 119.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 119.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 119.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 118.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 118.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 117.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 115.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 115.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 115.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 115.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 114.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 113.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 113.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 113.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 113.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 112.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 111.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 110.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 110.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 110.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 110.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 110.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 110.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 108.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 107.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 107.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 107.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 107.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 107.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 106.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 106.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 106.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 104.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 104.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 104.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 104.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 104.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 104.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 103.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 103.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 103.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 103.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 103.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 102.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 102.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 101.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 101.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 101.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 100.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 100.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 98.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 97.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 96.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 96.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 95.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 94.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 94.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 94.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 94.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 93.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 92.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 92.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 91.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 91.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 91.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 90.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 90.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 90.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 89.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 89.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 88.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 88.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 88.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 87.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 87.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 86.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 86.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 86.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 85.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 85.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 84.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 84.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 83.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 83.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 82.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 82.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 82.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 81.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 80.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 80.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 80.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 79.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 78.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 78.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 77.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 77.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 76.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 75.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 75.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 75.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 74.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 73.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 73.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 73.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 72.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 71.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 71.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 71.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 71.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 70.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 70.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 69.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 68.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 67.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 66.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 66.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 64.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 64.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 63.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 62.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 62.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 62.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 61.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 60.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 60.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 59.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 58.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 58.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 57.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 57.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 57.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 57.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 56.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 55.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 54.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 54.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 54.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 51.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 50.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 50.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 49.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 48.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 48.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 47.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 45.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 38.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 25.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

81.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 72.5
FF:10164-103B2 76 years, female 72.5
Nucleus accumbens
Scaled Tags Per Million: 75.7
FF:10037-101F1 23-56 years, mixed 75.7
Putamen
Scaled Tags Per Million: 80.5
FF:10176-103C5 60 years, female 80.5
Globus pallidus
Scaled Tags Per Million: 81.3
FF:10161-103A8 76 years, female 90.4
FF:10175-103C4 60 years, female 72.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.1
Pig sample Sample description nTPM
Caudate
nTPM: 80.1
Samples: 4

Max nTPM: 98.3
Min nTPM: 64.5
Sample A Female 64.5
Sample B Female 89.2
Sample C Male 98.3
Sample D Male 68.2
Putamen
nTPM: 90.1
Samples: 4

Max nTPM: 115.4
Min nTPM: 73.7
Sample A Female 77.5
Sample B Female 73.7
Sample C Male 115.4
Sample D Male 93.8
Septum
nTPM: 73.9
Samples: 4

Max nTPM: 75.6
Min nTPM: 70.7
Sample A Female 70.7
Sample B Female 75.0
Sample C Male 75.6
Sample D Male 74.4
Ventral pallidum
nTPM: 77.4
Samples: 4

Max nTPM: 91.5
Min nTPM: 66.2
Sample A Female 66.2
Sample B Female 81.2
Sample C Male 91.5
Sample D Male 70.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 29.1
Samples: 4

Max nTPM: 30.5
Min nTPM: 27.9
Sample A Male 28.6
Sample B Male 27.9
Sample C Female 30.5
Sample D Female 29.2
Septum
nTPM: 21.3
Samples: 4

Max nTPM: 23.3
Min nTPM: 19.5
Sample A Male 20.3
Sample B Male 19.5
Sample C Female 23.3
Sample D Female 22.2
Ventral forebrain
nTPM: 24.4
Samples: 4

Max nTPM: 25.9
Min nTPM: 21.5
Sample A Male 25.1
Sample B Male 21.5
Sample C Female 25.9
Sample D Female 24.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
69202358 Antisense, RP_050324_03_E03, Mouse strain C57BL/6J (56 days, male) 0.2
72340126 Antisense, RP_051101_02_A06, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
69202358 Antisense, RP_050324_03_E03, Mouse strain C57BL/6J (56 days, male) 0.1
72340126 Antisense, RP_051101_02_A06, Mouse strain C57BL/6J (56 days, male) 0.0

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