PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:623.5 nTPM
FANTOM5:722.9 Scaled Tags Per Million
Pig:166.1 nTPM
Mouse:182.2 nTPM
Allen mouse:9.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 623.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 485.2
2301 Female, age 85, both hemispheres 606.2
2188 Female, age 91, both hemispheres 513.3
2090 Male, age 80, both hemispheres 469.1
1984 Male, age 76, both hemispheres 352.2
Area postrema
nTPM: 530.9
2799 Male, age 61, both hemispheres 637.4
2306 Male, age 80, both hemispheres 605.6
2054 Male, age 76, both hemispheres 349.7
Dorsal cochlear nucleus
nTPM: 444.9
2378 Male, age 80, both hemispheres 498.9
2187 Female, age 91, both hemispheres 492.9
2802 Male, age 74, right hemisphere 434.3
2370 Male, age 61, both hemispheres 432.5
2058 Male, age 76, both hemispheres 366.0
Dorsal medullary reticular nucleus
nTPM: 402.7
2040 Female, age 85, both hemispheres 430.9
2373 Male, age 61, both hemispheres 409.3
2088 Male, age 76, both hemispheres 367.9
Dorsal motor vagal complex
nTPM: 501.9
2643 Male, age 74, both hemispheres 599.5
2797 Male, age 61, both hemispheres 594.2
2807 Female, age 85, both hemispheres 541.3
2185 Male, age 76, both hemispheres 530.9
2813 Female, age 72, unknown 513.7
2000 Male, age 74, unknown 435.5
2133 Female, age 91, both hemispheres 403.1
2844 Male, age 55, unknown 396.9
Dorsal tegmental nucleus
nTPM: 546.1
2358 Male, age 61, both hemispheres 800.3
2326 Male, age 74, both hemispheres 506.4
2083 Male, age 80, both hemispheres 469.5
1936 Male, age 76, left hemisphere 408.1
Dorsolateral tegmental area
nTPM: 464.4
2337 Male, age 61, both hemispheres 687.2
2654 Male, age 80, both hemispheres 486.6
2751 Female, age 85, both hemispheres 392.1
2141 Male, age 76, both hemispheres 389.8
2360 Male, age 74, both hemispheres 366.2
Gigantocellular reticular nuclei, medullary
nTPM: 434.8
2314 Male, age 61, both hemispheres 529.0
2310 Male, age 80, both hemispheres 455.4
2022 Male, age 76, right hemisphere 426.0
1876 Female, age 85, both hemispheres 410.9
2387 Female, age 91, both hemispheres 406.3
2462 Male, age 74, both hemispheres 381.1
Gigantocellular reticular nuclei, pars
nTPM: 407.4
2330 Male, age 80, both hemispheres 441.6
2336 Male, age 61, both hemispheres 428.5
2706 Male, age 80, both hemispheres 413.1
2084 Female, age 85, both hemispheres 389.9
2168 Male, age 76, both hemispheres 364.0
Inferior olive
nTPM: 513.1
2628 Female, age 91, both hemispheres 615.9
2379 Male, age 80, both hemispheres 510.8
2178 Male, age 61, both hemispheres 502.0
2563 Male, age 74, both hemispheres 495.4
2085 Female, age 85, both hemispheres 441.5
Kolliker-Fuse nucleus
nTPM: 486.1
2793 Female, age 91, left hemisphere 541.6
2315 Male, age 76, right hemisphere 476.7
2163 Male, age 80, both hemispheres 440.2
Lateral lemniscal nuclei
nTPM: 401.5
2169 Male, age 76, both hemispheres 439.7
2320 Female, age 91, left hemisphere 437.4
2746 Female, age 85, left hemisphere 379.3
2453 Male, age 74, right hemisphere 376.2
2036 Male, age 80, both hemispheres 375.0
Lateral medullary reticular nucleus
nTPM: 479.9
2374 Male, age 61, both hemispheres 540.1
2190 Female, age 85, both hemispheres 523.7
2852 Male, age 80, both hemispheres 502.8
2804 Female, age 91, both hemispheres 469.4
2305 Male, age 74, both hemispheres 427.9
2044 Male, age 76, both hemispheres 415.8
Lateral parabrachial nucleus
nTPM: 460.6
2792 Male, age 76, both hemispheres 542.4
2013 Male, age 80, both hemispheres 478.3
2139 Female, age 85, right hemisphere 420.9
2790 Male, age 61, both hemispheres 400.8
Lateral vestibular nucleus
nTPM: 482.1
2311 Male, age 80, both hemispheres 556.2
2184 Male, age 76, both hemispheres 408.0
Locus coeruleus
nTPM: 394.8
2720 Male, age 74, both hemispheres 506.2
2162 Male, age 80, both hemispheres 453.5
2123 Female, age 91, both hemispheres 413.2
1980 Male, age 76, both hemispheres 393.1
2014 Male, age 55, unknown 385.7
2317 Female, age 72, unknown 365.5
2788 Male, age 74, unknown 246.2
Medial olivary nucleus
nTPM: 529.0
2851 Male, age 80, both hemispheres 613.2
1962 Male, age 76, both hemispheres 540.8
1943 Male, age 61, both hemispheres 503.9
2138 Female, age 91, both hemispheres 458.1
Medial parabrachial nucleus
nTPM: 452.7
2170 Female, age 91, both hemispheres 539.9
2854 Male, age 80, both hemispheres 522.9
2156 Male, age 61, both hemispheres 473.1
2786 Male, age 76, both hemispheres 413.7
2463 Female, age 85, right hemisphere 313.7
Medial periolivary nuclei
nTPM: 375.4
2458 Female, age 91, both hemispheres 425.8
2081 Male, age 80, both hemispheres 391.0
2171 Female, age 85, both hemispheres 385.7
2063 Male, age 76, both hemispheres 376.5
2791 Male, age 74, right hemisphere 297.9
Medial vestibular nucleus
nTPM: 416.9
2624 Male, age 61, both hemispheres 536.2
2801 Male, age 74, both hemispheres 434.5
2803 Female, age 91, both hemispheres 424.6
2093 Male, age 80, both hemispheres 376.2
2743 Female, age 85, both hemispheres 366.6
2134 Male, age 76, both hemispheres 363.0
Motor facial nucleus
nTPM: 394.1
2697 Female, age 85, both hemispheres 497.1
2795 Female, age 91, both hemispheres 422.7
2365 Male, age 74, right hemisphere 400.7
2327 Male, age 80, both hemispheres 355.3
2126 Male, age 61, both hemispheres 347.5
2062 Male, age 76, both hemispheres 341.0
Motor hypoglossal nucleus
nTPM: 491.5
2182 Male, age 80, both hemispheres 673.4
2461 Male, age 61, both hemispheres 610.9
2132 Female, age 85, both hemispheres 473.2
2125 Female, age 91, both hemispheres 403.1
2277 Male, age 76, both hemispheres 296.8
Motor trigeminal nucleus
nTPM: 414.7
2335 Male, age 61, both hemispheres 456.8
2560 Male, age 74, both hemispheres 444.2
2321 Female, age 91, both hemispheres 439.8
2309 Male, age 76, both hemispheres 384.7
2079 Male, age 80, both hemispheres 348.2
Nuclei of the trapezoid body
nTPM: 379.0
1983 Male, age 76, both hemispheres 484.5
2166 Male, age 80, both hemispheres 405.7
2368 Female, age 91, both hemispheres 368.2
2159 Male, age 61, both hemispheres 325.6
2735 Female, age 85, both hemispheres 310.8
Nucleus ambiguus
nTPM: 404.2
2071 Male, age 76, both hemispheres 452.5
2096 Female, age 85, both hemispheres 355.8
Nucleus cuneatus
nTPM: 463.6
2381 Male, age 80, both hemispheres 557.4
2808 Female, age 85, both hemispheres 543.3
2805 Female, age 91, both hemispheres 515.9
2380 Male, age 80, both hemispheres 500.6
2564 Male, age 74, both hemispheres 477.3
2562 Male, age 61, both hemispheres 460.4
2376 Male, age 61, both hemispheres 400.3
2100 Male, age 76, both hemispheres 370.9
2131 Male, age 76, both hemispheres 346.0
Nucleus gracilis
nTPM: 623.5
2382 Male, age 80, both hemispheres 662.4
2299 Female, age 85, both hemispheres 612.1
2627 Male, age 74, both hemispheres 595.9
Nucleus raphe magnus
nTPM: 404.6
2051 Male, age 76, both hemispheres 492.6
2328 Male, age 80, both hemispheres 413.7
2455 Male, age 74, both hemispheres 399.7
2172 Female, age 85, both hemispheres 399.5
2459 Female, age 91, both hemispheres 385.7
2160 Male, age 61, both hemispheres 336.2
Nucleus raphe obscurus
nTPM: 427.4
2142 Male, age 76, midline 449.1
2845 Female, age 85, midline 440.0
2800 Male, age 61, midline 393.0
Nucleus raphe pallidus
nTPM: 506.6
2183 Male, age 80, midline 585.2
1924 Male, age 61, midline 532.6
2145 Male, age 76, midline 402.0
Nucleus tractus solitarii
nTPM: 396.3
2191 Female, age 85, both hemispheres 550.4
2307 Male, age 80, both hemispheres 441.9
2656 Male, age 76, both hemispheres 365.8
2144 Female, age 91, right hemisphere 227.1
Paramedian reticular nucleus
nTPM: 379.1
2052 Male, age 76, both hemispheres 406.6
2050 Female, age 85, both hemispheres 394.9
2057 Male, age 80, both hemispheres 363.0
2313 Male, age 61, both hemispheres 352.0
Parvicellular reticular nuclei
nTPM: 395.2
2095 Male, age 76, both hemispheres 404.9
2119 Male, age 80, both hemispheres 401.7
2558 Male, age 74, both hemispheres 378.9
Parvicellular reticular nuclei, medullary
nTPM: 436.5
2189 Female, age 91, both hemispheres 456.2
2181 Male, age 80, left hemisphere 447.9
2091 Female, age 85, both hemispheres 405.4
Pedunculopontine tegmental nucleus
nTPM: 453.9
2338 Male, age 61, both hemispheres 537.8
2334 Male, age 80, both hemispheres 493.3
1921 Female, age 85, both hemispheres 330.7
Peritrigeminal nucleus
nTPM: 463.3
2067 Female, age 85, both hemispheres 498.9
2136 Male, age 76, both hemispheres 474.1
2179 Male, age 61, both hemispheres 416.9
Pontine nuclei
nTPM: 425.4
2787 Female, age 85, both hemispheres 517.3
2319 Female, age 91, both hemispheres 503.8
1863 Male, age 55, unknown 474.9
1968 Male, age 76, left hemisphere 442.4
2454 Male, age 74, left hemisphere 421.9
2115 Male, age 80, left hemisphere 416.4
2109 Female, age 72, unknown 345.9
2727 Male, age 61, right hemisphere 280.6
Pontine raphe nucleus
nTPM: 353.3
2122 Female, age 85, midline 358.9
2853 Male, age 76, midline 347.7
Posteroventral cochlear nucleus
nTPM: 426.7
2341 Male, age 80, both hemispheres 467.6
2135 Female, age 91, both hemispheres 456.3
2371 Male, age 61, both hemispheres 446.9
2070 Male, age 76, both hemispheres 402.9
2752 Female, age 85, both hemispheres 359.7
Prepositus hypoglossal nucleus
nTPM: 399.8
2086 Male, age 80, both hemispheres 416.0
2855 Female, age 85, right hemisphere 383.7
Principal sensory trigeminal nucleus
nTPM: 382.5
2367 Female, age 91, left hemisphere 456.5
2324 Male, age 76, both hemispheres 435.4
2158 Male, age 61, both hemispheres 338.7
2008 Male, age 80, left hemisphere 299.2
Reticular pontine nucleus, caudal
nTPM: 414.7
2457 Female, age 91, both hemispheres 457.6
2092 Male, age 76, both hemispheres 440.1
2559 Male, age 74, both hemispheres 437.5
2332 Male, age 80, right hemisphere 323.5
Reticular pontine nucleus, oral
nTPM: 447.4
2366 Female, age 91, both hemispheres 564.9
2167 Male, age 76, both hemispheres 489.5
1939 Male, age 80, both hemispheres 432.6
2012 Female, age 85, both hemispheres 378.8
2361 Male, age 74, both hemispheres 371.4
Reticulotegmental nucleus
nTPM: 430.9
2452 Male, age 74, both hemispheres 510.1
2322 Female, age 91, both hemispheres 420.6
2333 Male, age 80, both hemispheres 419.4
2325 Male, age 76, both hemispheres 373.4
Spinal trigeminal nucleus, caudal
nTPM: 466.2
2312 Male, age 61, both hemispheres 517.1
2308 Male, age 80, both hemispheres 502.3
2642 Male, age 74, both hemispheres 501.5
2390 Female, age 91, both hemispheres 428.8
2447 Male, age 76, both hemispheres 381.2
Spinal trigeminal nucleus, interpolar
nTPM: 446.3
2389 Female, age 91, both hemispheres 487.2
2033 Male, age 80, both hemispheres 474.5
2625 Male, age 61, both hemispheres 463.6
2386 Female, age 85, both hemispheres 405.2
2066 Male, age 76, right hemisphere 400.9
Spinal trigeminal nucleus, oral
nTPM: 396.2
2164 Male, age 80, both hemispheres 458.2
1978 Male, age 76, both hemispheres 411.5
2737 Female, age 85, both hemispheres 319.0
Spinal vestibular nucleus
nTPM: 452.1
2780 Male, age 80, both hemispheres 471.0
2748 Male, age 76, both hemispheres 468.8
2796 Male, age 61, both hemispheres 464.4
2384 Male, age 74, both hemispheres 462.6
2186 Female, age 91, both hemispheres 427.9
2806 Female, age 85, both hemispheres 417.8
Subcoeruleus area
nTPM: 415.3
2451 Male, age 74, both hemispheres 501.3
2323 Female, age 91, left hemisphere 420.7
1958 Male, age 80, both hemispheres 419.5
2369 Female, age 85, left hemisphere 391.5
2089 Male, age 76, left hemisphere 343.7
Superior olive
nTPM: 396.4
2561 Female, age 91, both hemispheres 466.8
2020 Male, age 76, both hemispheres 434.1
2329 Male, age 80, right hemisphere 386.6
2364 Male, age 74, right hemisphere 372.2
1875 Female, age 85, both hemispheres 322.2
Superior vestibular nucleus
nTPM: 431.6
2383 Male, age 74, both hemispheres 459.7
2015 Male, age 80, both hemispheres 448.9
2061 Male, age 76, both hemispheres 386.2
Ventral medullary reticular nucleus
nTPM: 413.6
2372 Male, age 61, both hemispheres 447.9
2060 Male, age 76, both hemispheres 379.4
Ventral periolivary nuclei
nTPM: 413.5
2130 Female, age 85, both hemispheres 435.5
2023 Male, age 76, both hemispheres 421.7
2165 Male, age 80, both hemispheres 409.1
2794 Female, age 91, left hemisphere 387.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 476.4
2302 Female, age 91, both hemispheres 519.6
2118 Male, age 80, both hemispheres 494.1
1986 Male, age 76, both hemispheres 470.0
2180 Male, age 61, both hemispheres 449.0
2741 Female, age 85, both hemispheres 449.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 435.6
2359 Male, age 61, both hemispheres 489.1
2840 Female, age 85, both hemispheres 475.8
2161 Male, age 80, both hemispheres 471.8
2456 Female, age 91, both hemispheres 407.9
1959 Male, age 76, both hemispheres 404.0
2449 Male, age 74, both hemispheres 365.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 722.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 492.6
FF:10182-103D2 60 years, female 531.3
FF:10165-103B3 76 years, female 454.0
Medulla oblongata
Scaled Tags Per Million: 722.9
FF:10038-101F2 18-64 years, mixed 938.4
FF:10174-103C3 60 years, female 885.8
FF:10155-103A2 76 years, female 344.5
Pons
Scaled Tags Per Million: 648.9
FF:10033-101E6 18-54 years, mixed 648.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 166.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 163.4
Samples: 4

Max nTPM: 190.3
Min nTPM: 131.9
Sample A Female 146.6
Sample B Female 131.9
Sample C Male 184.8
Sample D Male 190.3
Pons
nTPM: 166.1
Samples: 4

Max nTPM: 190.1
Min nTPM: 119.5
Sample A Female 179.1
Sample B Female 119.5
Sample C Male 175.7
Sample D Male 190.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 182.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 182.2
Samples: 4

Max nTPM: 211.4
Min nTPM: 144.4
Sample A Male 211.4
Sample B Male 144.4
Sample C Female 208.1
Sample D Female 164.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 9.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 9.4
69173436 Antisense, RP_050329_01_E12, Mouse strain C57BL/6J (56 days, male) 9.4
Pons
Expression energy: 8.6
69173436 Antisense, RP_050329_01_E12, Mouse strain C57BL/6J (56 days, male) 8.6

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