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RPL28
HPA
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  • RPL28
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:860.9 nTPM
FANTOM5:417.4 Scaled Tags Per Million
Pig:126.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA050459
Glial cells Not detected
Neuronal cells High


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

860.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 860.9
Samples: 246

Max nTPM: 2968.0
Min nTPM: 291.0
Std nTPM: 302.1
Median nTPM: 812.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2968.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 2065.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1802.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1709.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1557.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1490.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1480.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1409.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1409.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1361.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1347.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1347.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1339.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1335.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1326.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1322.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1301.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1297.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1282.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1262.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1253.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1238.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1233.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1221.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1209.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1209.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1201.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1199.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1197.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1187.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1181.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1168.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1166.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1164.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1161.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1157.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1157.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1154.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1149.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1140.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1137.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1136.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1133.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1128.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1119.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1118.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1114.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1096.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1091.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1086.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1086.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1084.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1080.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1057.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1050.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 1046.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1046.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1045.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1038.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1034.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1030.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1007.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1002.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1001.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 998.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 992.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 990.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 987.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 973.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 965.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 959.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 958.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 955.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 954.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 950.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 946.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 936.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 926.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 923.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 920.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 920.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 917.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 916.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 915.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 912.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 901.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 893.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 892.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 892.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 889.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 888.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 885.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 884.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 881.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 880.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 878.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 877.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 875.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 870.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 862.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 860.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 858.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 857.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 855.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 851.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 850.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 849.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 847.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 844.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 840.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 839.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 839.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 837.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 836.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 831.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 830.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 827.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 825.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 821.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 817.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 817.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 815.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 813.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 811.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 810.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 807.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 804.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 803.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 798.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 798.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 796.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 792.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 787.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 785.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 783.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 779.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 777.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 776.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 775.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 775.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 772.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 769.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 763.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 761.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 753.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 753.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 752.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 751.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 749.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 745.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 744.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 742.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 738.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 736.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 734.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 730.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 730.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 726.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 725.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 724.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 721.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 721.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 718.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 710.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 705.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 704.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 698.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 695.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 693.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 693.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 692.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 692.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 688.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 685.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 685.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 678.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 675.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 674.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 673.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 671.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 669.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 668.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 667.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 657.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 653.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 653.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 653.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 651.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 649.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 648.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 641.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 640.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 638.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 636.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 633.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 627.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 624.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 623.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 623.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 621.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 621.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 618.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 617.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 615.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 609.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 608.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 605.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 604.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 598.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 597.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 596.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 594.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 587.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 584.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 576.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 575.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 569.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 569.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 567.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 563.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 557.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 553.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 541.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 534.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 522.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 522.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 519.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 515.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 511.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 510.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 509.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 506.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 502.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 501.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 494.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 487.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 478.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 477.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 473.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 461.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 415.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 398.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 387.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 380.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 316.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 291.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

417.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 417.4
FF:10164-103B2 76 years, female 417.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.5
Pig sample Sample description nTPM
Caudate
nTPM: 126.5
Samples: 4

Max nTPM: 146.0
Min nTPM: 102.3
Sample A Female 115.2
Sample B Female 146.0
Sample C Male 142.5
Sample D Male 102.3

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