We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL28
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPL28
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1426.6 nTPM
HPA:750.9 nTPM
GTEx:1426.6 nTPM
FANTOM5:1702.6 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA050459
Glandular cells High


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

750.9
overview
Male, age 65
Small intestine sample 232
nTPM: 940
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 707.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 723.5
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 632.5

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1426.6
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1426.6
Samples: 187

Max nTPM: 3155.1
Min nTPM: 657.3
Std nTPM: 464.3
Median nTPM: 1342.1
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 3155.1
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2923.7
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2670.9
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2639.8
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2592.6
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2583.7
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 2451.2
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2330.7
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2327.5
GTEX-183FY-1626-SM-793D8 20-29 years, male 2277.0
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2220.6
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2179.8
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 2175.8
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2149.0
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2141.0
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 2122.9
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2106.8
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 2075.1
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 2042.5
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2028.2
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 2007.1
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 2003.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1969.5
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1956.1
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1945.6
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1926.8
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1873.0
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1871.0
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1851.9
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1840.8
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1831.9
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1829.3
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1826.8
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1823.5
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1816.1
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1812.0
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1809.5
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1809.4
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1801.7
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1790.9
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1779.5
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1748.1
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1745.9
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1719.3
GTEX-1C475-1426-SM-793CH 40-49 years, female 1705.8
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1704.2
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1694.3
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1691.7
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1682.2
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1675.4
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1660.6
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1653.3
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1650.5
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1649.6
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1644.8
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1642.2
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1635.5
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1614.6
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1612.5
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1607.3
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1601.5
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1597.9
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1594.6
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1583.5
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1580.6
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1577.6
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1575.6
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1574.7
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1568.0
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1563.8
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1562.9
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1561.3
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1549.3
GTEX-1192X-2526-SM-59868 50-59 years, male 1548.6
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1547.7
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1535.1
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1534.5
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1528.7
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1491.0
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1488.8
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1451.6
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1436.5
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1432.7
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1431.9
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1411.0
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1397.6
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1397.3
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1394.7
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1377.4
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1359.5
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1357.8
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1354.5
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1348.7
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1342.1
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1323.2
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1316.8
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1307.0
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1307.0
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1305.4
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1303.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1300.8
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1295.3
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1273.1
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1272.2
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1240.1
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1236.4
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1230.3
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1213.3
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1205.4
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1202.8
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1198.8
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1197.7
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1180.8
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1180.2
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1170.3
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1169.3
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1168.5
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1168.2
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1166.3
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1164.5
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1155.8
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1155.3
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1152.7
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1152.7
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1151.8
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1149.2
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1145.6
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1144.9
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1138.2
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1138.0
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1135.1
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1133.7
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1131.5
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1127.7
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1100.4
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1096.8
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1094.6
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1092.2
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1082.4
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1077.5
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1077.5
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1074.9
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1073.7
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1067.8
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1054.6
GTEX-14PN3-2026-SM-68729 60-69 years, female 1044.0
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1043.6
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1043.2
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1034.9
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1019.9
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1009.6
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1007.9
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1004.8
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1000.6
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 998.3
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 990.3
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 984.8
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 971.6
GTEX-1122O-1326-SM-5H11F 60-69 years, female 967.2
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 961.0
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 958.1
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 950.3
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 949.3
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 945.2
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 937.4
GTEX-111YS-1426-SM-5GID8 60-69 years, male 932.1
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 932.1
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 925.6
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 921.4
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 896.3
GTEX-YFCO-1326-SM-664NV 40-49 years, male 887.1
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 870.7
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 869.4
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 865.7
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 855.2
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 852.4
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 832.8
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 832.6
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 816.6
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 788.5
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 786.0
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 766.5
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 748.7
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 725.4
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 723.5
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 697.0
GTEX-ZTSS-0926-SM-59865 40-49 years, male 657.3
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1702.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 1702.6
FF:10024-101D6 15,40,85 years, mixed 1702.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org