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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
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VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:392.3 nTPM
GTEx:392.3 nTPM
FANTOM5:83.8 Scaled Tags Per Million

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

392.3
GTEx sample id Sample description nTPM
Retina
Average nTPM: 392.3
Samples: 105

Max nTPM: 591.1
Min nTPM: 148.7
Std nTPM: 101.7
Median nTPM:
177_1 74 years, male 591.1
319_1 81 years, male 582.1
163_1 78 years, male 574.1
172_1 72 years, female 569.6
377_1 82 years, female 568.6
425_1 59 years, female 565.9
375_1 74 years, female 565.2
379_1 60 years, male 543.1
386_1 76 years, male 539.8
352_1 62 years, male 528.5
292_1 71 years, male 526.4
243_1 75 years, male 518.9
394_1 75 years, female 517.8
173_1 67 years, male 506.6
335_1 73 years, female 504.9
237_1 82 years, male 504.3
229_1 69 years, female 499.5
246_1 77 years, male 497.6
356_1 87 years, female 495.0
264_1 73 years, female 487.7
286_1 68 years, female 486.8
376_1 75 years, female 486.3
153_1 70 years, female 485.9
115_1 83 years, male 478.7
254_1 77 years, female 477.2
17_1 71 years, male 470.2
35_1 74 years, female 465.3
9_1 66 years, female 461.7
265_1 87 years, male 460.3
126_1 63 years, male 454.4
406_1 79 years, male 454.4
316_1 62 years, male 454.3
349_1 83 years, male 448.8
6_1 73 years, female 446.0
218_1 71 years, female 441.1
350_1 84 years, female 438.8
503_1 68 years, male 438.3
318_1 68 years, male 434.1
404_1 82 years, female 431.7
189_1 76 years, male 426.8
347_1 72 years, male 426.2
351_1 91 years, male 425.5
452_1 88 years, female 424.4
320_1 89 years, female 420.5
321_1 62 years, female 413.9
384_1 83 years, male 413.5
414_1 84 years, female 403.8
295_1 61 years, female 402.5
405_1 91 years, male 395.3
468_1 89 years, male 394.7
355_1 70 years, female 394.3
142_1 61 years, female 394.1
447_1 81 years, male 392.8
324_1 76 years, male 391.6
4_1 88 years, female 390.2
389_1 86 years, female 383.4
480_1 63 years, male 382.8
526_1 61 years, male 381.0
517_1 88 years, male 380.1
266_1 85 years, male 379.6
354_1 81 years, female 377.1
499_1 55 years, female 374.0
109_1 81 years, female 370.5
137_1 83 years, male 365.0
18_1 88 years, male 360.4
353_1 82 years, female 356.1
506_1 65 years, male 354.7
99_1 64 years, male 353.2
313_1 79 years, female 351.5
291_1 76 years, male 350.7
145_1 84 years, male 349.4
413_1 59 years, female 348.7
288_1 66 years, female 347.7
2_1 77 years, female 347.3
315_1 62 years, female 344.9
293_1 68 years, female 343.4
217_1 76 years, male 335.8
348_1 84 years, male 334.5
251_1 78 years, male 324.7
314_1 67 years, male 321.2
120_1 70 years, female 316.8
117_1 61 years, male 311.9
81_1 67 years, male 311.4
43_1 64 years, female 301.1
42_1 85 years, male 300.2
317_1 60 years, male 290.6
322_1 76 years, male 288.8
466_1 57 years, female 284.9
415_1 77 years, female 284.5
139_1 64 years, female 271.7
518_1 75 years, female 263.9
32_1 67 years, male 261.5
41_1 94 years, female 259.4
311_1 78 years, male 256.6
501_1 88 years, male 255.0
307_1 66 years, female 246.7
162_1 79 years, female 246.3
490_1 67 years, female 244.2
149_1 88 years, male 234.8
396_1 62 years, male 226.5
89_1 63 years, male 219.4
119_1 70 years, female 212.8
491_1 89 years, female 171.1
308_1 70 years, female 153.3
495_1 57 years, female 148.7
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

83.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 83.8
FF:10030-101E3 24-65 years, mixed 83.8

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