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SLC9A3R1
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  • SLC9A3R1
TISSUE PRIMARY DATA CEREBELLUM Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Cerebellum
Tissue proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Not detected
Cells in molecular layer: Not detected
Purkinje cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:92.2 nTPM
HPA Brain:95.7 nTPM
GTEx:92.2 nTPM
FANTOM5:53.7 Scaled Tags Per Million
Pig:26.6 nTPM
Mouse:45.5 nTPM
Allen mouse:10.5 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA009672Antibody HPA027247Antibody CAB001962
Purkinje cells Not detectedNot detectedHigh
Cells in granular layer Not detectedNot detectedLow
Cells in molecular layer Not detectedNot detectedHigh







CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.7
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 95.7
1788 Male, age 55, unknown 111.7
1768 Female, age 72, unknown 105.1
1774 Male, age 80, left hemisphere 100.5
1769 Male, age 76, right hemisphere 97.5
2006 Male, age 61, right hemisphere 92.2
2055 Female, age 91, right hemisphere 89.8
2003 Female, age 85, right hemisphere 85.5
2101 Male, age 74, right hemisphere 83.0
Cerebellar nuclei
nTPM: 86.6
2783 Female, age 72, unknown 111.6
1871 Male, age 74, unknown 93.0
2005 Male, age 80, left hemisphere 92.3
1966 Female, age 91, left hemisphere 91.3
2882 Male, age 76, left hemisphere 90.0
2175 Male, age 61, right hemisphere 79.7
2318 Male, age 74, left hemisphere 76.6
1879 Male, age 55, unknown 74.9
2177 Female, age 85, both hemispheres 69.8
Flocculonodular lobe
nTPM: 93.6
1765 Male, age 55, unknown 116.4
1771 Male, age 80, left hemisphere 103.9
1792 Male, age 74, unknown 98.8
2176 Female, age 91, right hemisphere 96.5
1767 Male, age 76, left hemisphere 86.5
2004 Male, age 61, right hemisphere 86.2
1835 Female, age 85, right hemisphere 67.0
Vermis
nTPM: 94.1
2460 Male, age 61, both hemispheres 118.4
1766 Male, age 55, unknown 115.6
1928 Female, age 72, unknown 101.9
1778 Female, age 91, left hemisphere 91.7
1770 Male, age 76, left hemisphere 90.9
1825 Male, age 74, unknown 89.3
1988 Female, age 85, left hemisphere 83.7
2834 Male, age 80, left hemisphere 79.6
1751 Male, age 74, right hemisphere 76.4

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.2
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 82.6
Samples: 215

Max nTPM: 148.9
Min nTPM: 37.8
Std nTPM: 18.2
Median nTPM: 80.9
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 148.9
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 140.5
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 136.7
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 136.5
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 130.8
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 130.2
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 128.6
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 124.2
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 121.3
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 121.1
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 120.4
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 117.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 115.4
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 114.2
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 113.5
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 110.5
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 110.3
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 108.3
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 107.6
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 106.0
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 103.8
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 103.8
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 102.5
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 102.3
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 102.1
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 101.9
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 101.4
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 101.2
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 100.9
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 99.0
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 98.6
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 98.2
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 98.2
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 97.9
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 97.8
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 97.3
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 97.3
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 97.0
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 96.5
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 95.4
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 95.3
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 94.9
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 94.7
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 94.6
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 94.5
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 93.3
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 93.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 93.0
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 92.9
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 92.8
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 92.7
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 92.6
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 91.5
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 91.4
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 91.2
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 91.2
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 91.2
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 90.7
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 90.5
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 90.5
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 90.3
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 90.1
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 89.8
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 89.8
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 89.5
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 89.4
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 89.2
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 88.7
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 88.1
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 87.7
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 87.7
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 87.7
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 87.7
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 87.4
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 87.2
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 87.1
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 86.9
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 86.8
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 86.6
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 86.1
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 86.0
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 85.6
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 85.5
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 85.4
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 85.4
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 85.3
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 85.2
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 85.1
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 84.9
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 84.3
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 84.1
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 84.1
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 83.9
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 83.4
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 83.4
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 83.1
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 82.9
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 82.8
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 82.7
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 82.6
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 82.3
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 82.1
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 81.8
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 81.8
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 81.5
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 81.4
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 81.2
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 80.9
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 80.5
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 80.3
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 80.2
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 80.0
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 80.0
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 79.7
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 79.6
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 79.4
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 79.1
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 78.8
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 78.7
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 78.3
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 78.2
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 78.2
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 77.9
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 77.8
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 77.8
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 77.6
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 77.5
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 77.4
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 77.2
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 77.1
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 77.1
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 76.8
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 76.8
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 76.2
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 76.1
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 76.0
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 75.7
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 75.7
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 75.6
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 75.3
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 75.3
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 75.2
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 75.0
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 74.9
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 74.8
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 74.5
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 74.2
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 74.0
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 73.6
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 73.6
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 73.2
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 73.2
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 72.8
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 72.6
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 72.2
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 72.1
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 72.0
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 72.0
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 71.6
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 71.0
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 70.9
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 70.8
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 70.6
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 70.4
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 70.2
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 70.2
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 70.1
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 70.0
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 69.5
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 69.5
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 69.2
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 69.1
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 68.9
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 67.8
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 67.4
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 67.2
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 66.3
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 66.0
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 65.8
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 65.5
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 65.4
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 64.0
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 63.8
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 63.4
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 63.3
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 63.1
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 62.6
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 62.0
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 61.3
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 61.0
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 61.0
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 60.9
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 60.9
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 60.8
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 60.7
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 60.6
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 60.4
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 59.5
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 59.4
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 59.3
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 59.2
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 59.2
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 58.9
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 58.2
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 57.6
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 57.5
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 56.7
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 56.1
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 55.9
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 54.3
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 54.2
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 49.8
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 44.8
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 39.9
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 37.8
Show allShow less
Brain - Cerebellum
Average nTPM: 92.2
Samples: 241

Max nTPM: 140.7
Min nTPM: 52.6
Std nTPM: 15.5
Median nTPM: 90.8
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 140.7
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 140.4
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 138.7
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 137.0
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 134.4
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 130.7
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 129.0
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 126.8
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 125.3
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 123.0
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 122.8
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 122.4
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 121.0
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 120.5
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 119.1
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 118.6
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 117.7
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 115.4
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 114.7
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 113.5
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 112.8
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 111.9
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 111.1
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 111.0
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 110.6
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 110.5
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 110.5
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 109.4
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 108.6
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 108.6
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 108.5
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 108.1
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 108.0
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 107.9
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 107.7
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 107.2
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 107.0
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 106.9
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 106.9
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 106.2
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 106.1
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 106.0
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 105.8
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 105.7
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 105.4
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 105.2
GTEX-11EI6-2926-SM-5985U 60-69 years, male 104.7
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 103.8
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 103.7
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 103.2
GTEX-14E6D-2926-SM-664OP 50-59 years, male 103.0
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 102.6
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 102.4
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 102.0
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 102.0
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 101.9
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 100.9
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 100.9
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 100.5
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 100.0
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 99.8
GTEX-11ONC-3026-SM-5985W 60-69 years, male 99.6
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 99.5
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 99.3
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 99.3
GTEX-144GL-2926-SM-5O99F 50-59 years, male 99.1
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 99.1
GTEX-12126-0926-SM-5FQTW 20-29 years, male 99.0
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 99.0
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 98.8
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 98.7
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 98.7
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 98.5
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 98.1
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 97.8
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 97.5
GTEX-13112-2926-SM-5DUWT 50-59 years, male 97.3
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 97.2
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 97.1
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 96.4
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 96.3
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 96.2
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 96.2
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 96.0
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 95.9
GTEX-X261-3126-SM-4PQZC 50-59 years, male 95.6
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 95.6
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 95.5
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 95.3
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 95.1
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 95.0
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 94.9
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 94.9
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 94.9
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 94.7
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 94.6
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 94.6
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 94.4
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 94.4
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 94.2
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 94.2
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 93.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 93.8
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 93.7
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 93.6
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 93.5
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 93.5
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 93.4
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 93.3
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 93.3
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 93.1
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 93.1
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 92.9
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 92.5
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 91.8
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 91.4
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 91.4
GTEX-14PN4-3026-SM-664O4 50-59 years, male 91.4
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 91.0
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 90.9
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 90.8
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 90.7
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 90.7
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 90.6
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 90.6
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 90.4
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 90.3
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 90.2
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 90.1
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 90.1
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 90.0
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 90.0
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 89.6
GTEX-14ABY-3026-SM-664NE 50-59 years, male 89.1
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 89.1
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 89.0
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 88.9
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 88.9
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 88.8
GTEX-17HII-2926-SM-79OMK 50-59 years, male 88.6
GTEX-11DYG-2926-SM-5H132 60-69 years, male 88.3
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 88.1
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 87.8
GTEX-11NUK-3026-SM-5986K 50-59 years, male 87.3
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 87.3
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 87.2
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 87.1
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 86.8
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 86.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 86.7
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 86.7
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 86.6
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 86.5
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 86.5
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 86.4
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 86.4
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 86.3
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 86.3
GTEX-15G19-2826-SM-6M48K 60-69 years, male 86.0
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 85.9
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 85.8
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 85.6
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 85.6
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 85.4
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 85.0
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 84.9
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 84.9
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 84.9
GTEX-18465-2926-SM-7KFSE 50-59 years, male 84.6
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 84.0
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 83.9
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 83.8
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 83.5
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 83.4
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 82.9
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 82.7
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 82.7
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 82.6
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 82.5
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 82.4
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 82.2
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 82.2
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 81.9
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 81.6
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 81.6
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 81.4
GTEX-1192X-3226-SM-5987D 50-59 years, male 81.3
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 81.3
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 81.0
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 81.0
GTEX-17EVP-2926-SM-793BU 40-49 years, male 80.8
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 80.3
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 80.0
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 79.7
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 79.7
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 79.4
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 79.1
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 79.0
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 78.8
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 78.7
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 78.3
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 78.2
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 78.2
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 78.1
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 77.2
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 76.0
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 75.9
GTEX-1B933-3026-SM-731DB 50-59 years, female 75.9
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 75.1
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 75.0
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 74.7
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 74.7
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 74.3
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 74.1
GTEX-RU72-2926-SM-2TF66 50-59 years, female 73.8
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 73.8
GTEX-WL46-2826-SM-3LK81 50-59 years, male 73.3
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 72.7
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 72.7
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 72.2
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 72.2
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 72.1
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 72.1
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 71.9
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 71.4
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 70.6
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 68.8
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 68.7
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 68.7
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 68.4
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 68.2
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 66.4
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 66.3
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 65.6
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 65.2
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 64.5
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 63.5
GTEX-145LS-3026-SM-5O99S 60-69 years, female 60.5
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 58.5
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 57.9
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 52.6
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

53.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 53.7
FF:10083-102B2 22-68 years, mixed 62.0
FF:10166-103B4 76 years, female 45.4

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.6
Pig sample Sample description nTPM
Cerebellum
nTPM: 26.6
Samples: 4

Max nTPM: 38.6
Min nTPM: 17.3
Sample A Female 38.6
Sample B Female 23.3
Sample C Male 17.3
Sample D Male 27.3

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.5
Mouse sample Sample description nTPM
Cerebellum
nTPM: 45.5
Samples: 4

Max nTPM: 51.6
Min nTPM: 40.8
Sample A Male 51.6
Sample B Male 44.8
Sample C Female 40.8
Sample D Female 44.6

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.5
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 10.5
69874066 Antisense, RP_050512_02_F01, Mouse strain C57BL/6J (56 days, male) 10.5

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The Human Protein Atlas

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


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