PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:1019.0 nTPM
FANTOM5:2183.5 Scaled Tags Per Million
Pig:1581.0 nTPM
Mouse:1872.8 nTPM
Allen mouse:18.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1019.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 734.8
1984 Male, age 76, both hemispheres 918.1
2188 Female, age 91, both hemispheres 719.3
2090 Male, age 80, both hemispheres 653.1
2301 Female, age 85, both hemispheres 648.6
Area postrema
nTPM: 631.9
2799 Male, age 61, both hemispheres 719.6
2306 Male, age 80, both hemispheres 588.4
2054 Male, age 76, both hemispheres 587.7
Dorsal cochlear nucleus
nTPM: 674.2
2187 Female, age 91, both hemispheres 798.9
2802 Male, age 74, right hemisphere 761.4
2378 Male, age 80, both hemispheres 632.5
2370 Male, age 61, both hemispheres 624.9
2058 Male, age 76, both hemispheres 553.1
Dorsal medullary reticular nucleus
nTPM: 685.0
2040 Female, age 85, both hemispheres 1036.9
2373 Male, age 61, both hemispheres 526.0
2088 Male, age 76, both hemispheres 492.1
Dorsal motor vagal complex
nTPM: 646.9
2000 Male, age 74, unknown 865.8
2133 Female, age 91, both hemispheres 843.1
2813 Female, age 72, unknown 792.1
2844 Male, age 55, unknown 779.2
2643 Male, age 74, both hemispheres 523.7
2797 Male, age 61, both hemispheres 470.0
2185 Male, age 76, both hemispheres 469.7
2807 Female, age 85, both hemispheres 431.5
Dorsal tegmental nucleus
nTPM: 757.8
2358 Male, age 61, both hemispheres 894.0
2083 Male, age 80, both hemispheres 774.5
2326 Male, age 74, both hemispheres 763.0
1936 Male, age 76, left hemisphere 599.9
Dorsolateral tegmental area
nTPM: 739.8
2654 Male, age 80, both hemispheres 791.5
2751 Female, age 85, both hemispheres 790.1
2360 Male, age 74, both hemispheres 783.7
2337 Male, age 61, both hemispheres 732.2
2141 Male, age 76, both hemispheres 601.4
Gigantocellular reticular nuclei, medullary
nTPM: 738.9
2462 Male, age 74, both hemispheres 824.4
1876 Female, age 85, both hemispheres 813.1
2314 Male, age 61, both hemispheres 743.3
2022 Male, age 76, right hemisphere 717.0
2387 Female, age 91, both hemispheres 714.1
2310 Male, age 80, both hemispheres 621.8
Gigantocellular reticular nuclei, pars
nTPM: 684.5
2084 Female, age 85, both hemispheres 830.1
2168 Male, age 76, both hemispheres 790.6
2336 Male, age 61, both hemispheres 680.8
2706 Male, age 80, both hemispheres 576.4
2330 Male, age 80, both hemispheres 544.5
Inferior olive
nTPM: 748.7
2563 Male, age 74, both hemispheres 942.4
2085 Female, age 85, both hemispheres 737.2
2628 Female, age 91, both hemispheres 719.5
2178 Male, age 61, both hemispheres 703.5
2379 Male, age 80, both hemispheres 641.1
Kolliker-Fuse nucleus
nTPM: 734.7
2163 Male, age 80, both hemispheres 902.5
2793 Female, age 91, left hemisphere 711.0
2315 Male, age 76, right hemisphere 590.6
Lateral lemniscal nuclei
nTPM: 757.7
2036 Male, age 80, both hemispheres 925.8
2169 Male, age 76, both hemispheres 862.7
2746 Female, age 85, left hemisphere 749.7
2453 Male, age 74, right hemisphere 659.6
2320 Female, age 91, left hemisphere 590.9
Lateral medullary reticular nucleus
nTPM: 789.0
2305 Male, age 74, both hemispheres 979.1
2044 Male, age 76, both hemispheres 857.1
2374 Male, age 61, both hemispheres 753.3
2804 Female, age 91, both hemispheres 747.1
2190 Female, age 85, both hemispheres 702.0
2852 Male, age 80, both hemispheres 695.7
Lateral parabrachial nucleus
nTPM: 707.4
2139 Female, age 85, right hemisphere 943.0
2013 Male, age 80, both hemispheres 742.4
2790 Male, age 61, both hemispheres 603.5
2792 Male, age 76, both hemispheres 540.9
Lateral vestibular nucleus
nTPM: 770.1
2184 Male, age 76, both hemispheres 803.3
2311 Male, age 80, both hemispheres 737.0
Locus coeruleus
nTPM: 1019.0
2014 Male, age 55, unknown 1301.7
2123 Female, age 91, both hemispheres 1274.9
2788 Male, age 74, unknown 1094.7
2720 Male, age 74, both hemispheres 984.3
2317 Female, age 72, unknown 861.6
1980 Male, age 76, both hemispheres 824.6
2162 Male, age 80, both hemispheres 791.0
Medial olivary nucleus
nTPM: 698.8
1943 Male, age 61, both hemispheres 818.3
2138 Female, age 91, both hemispheres 773.3
2851 Male, age 80, both hemispheres 681.1
1962 Male, age 76, both hemispheres 522.6
Medial parabrachial nucleus
nTPM: 763.7
2170 Female, age 91, both hemispheres 930.9
2854 Male, age 80, both hemispheres 879.0
2463 Female, age 85, right hemisphere 750.7
2156 Male, age 61, both hemispheres 657.2
2786 Male, age 76, both hemispheres 600.7
Medial periolivary nuclei
nTPM: 809.6
2171 Female, age 85, both hemispheres 1107.9
2063 Male, age 76, both hemispheres 899.6
2791 Male, age 74, right hemisphere 875.3
2081 Male, age 80, both hemispheres 608.6
2458 Female, age 91, both hemispheres 556.6
Medial vestibular nucleus
nTPM: 889.3
2801 Male, age 74, both hemispheres 1047.8
2743 Female, age 85, both hemispheres 932.8
2803 Female, age 91, both hemispheres 874.8
2134 Male, age 76, both hemispheres 860.2
2624 Male, age 61, both hemispheres 813.6
2093 Male, age 80, both hemispheres 806.9
Motor facial nucleus
nTPM: 749.8
2062 Male, age 76, both hemispheres 919.8
2365 Male, age 74, right hemisphere 917.4
2697 Female, age 85, both hemispheres 764.8
2795 Female, age 91, both hemispheres 662.8
2126 Male, age 61, both hemispheres 646.1
2327 Male, age 80, both hemispheres 588.2
Motor hypoglossal nucleus
nTPM: 750.2
2132 Female, age 85, both hemispheres 891.3
2125 Female, age 91, both hemispheres 877.6
2461 Male, age 61, both hemispheres 786.1
2182 Male, age 80, both hemispheres 683.5
2277 Male, age 76, both hemispheres 512.5
Motor trigeminal nucleus
nTPM: 634.7
2079 Male, age 80, both hemispheres 714.8
2560 Male, age 74, both hemispheres 660.5
2335 Male, age 61, both hemispheres 641.6
2309 Male, age 76, both hemispheres 581.1
2321 Female, age 91, both hemispheres 575.7
Nuclei of the trapezoid body
nTPM: 786.7
2735 Female, age 85, both hemispheres 1008.7
1983 Male, age 76, both hemispheres 888.6
2159 Male, age 61, both hemispheres 816.3
2166 Male, age 80, both hemispheres 672.7
2368 Female, age 91, both hemispheres 547.4
Nucleus ambiguus
nTPM: 629.9
2096 Female, age 85, both hemispheres 684.7
2071 Male, age 76, both hemispheres 575.1
Nucleus cuneatus
nTPM: 586.3
2131 Male, age 76, both hemispheres 723.0
2564 Male, age 74, both hemispheres 704.4
2376 Male, age 61, both hemispheres 686.2
2380 Male, age 80, both hemispheres 618.2
2100 Male, age 76, both hemispheres 583.5
2381 Male, age 80, both hemispheres 528.8
2562 Male, age 61, both hemispheres 525.1
2805 Female, age 91, both hemispheres 458.9
2808 Female, age 85, both hemispheres 449.0
Nucleus gracilis
nTPM: 603.6
2627 Male, age 74, both hemispheres 850.9
2382 Male, age 80, both hemispheres 548.7
2299 Female, age 85, both hemispheres 411.3
Nucleus raphe magnus
nTPM: 793.4
2172 Female, age 85, both hemispheres 1054.7
2455 Male, age 74, both hemispheres 942.9
2160 Male, age 61, both hemispheres 845.0
2051 Male, age 76, both hemispheres 672.3
2328 Male, age 80, both hemispheres 666.9
2459 Female, age 91, both hemispheres 578.8
Nucleus raphe obscurus
nTPM: 673.7
2800 Male, age 61, midline 810.0
2845 Female, age 85, midline 790.1
2142 Male, age 76, midline 421.0
Nucleus raphe pallidus
nTPM: 752.8
2183 Male, age 80, midline 914.9
1924 Male, age 61, midline 873.7
2145 Male, age 76, midline 469.7
Nucleus tractus solitarii
nTPM: 708.0
2144 Female, age 91, right hemisphere 1159.4
2191 Female, age 85, both hemispheres 627.1
2656 Male, age 76, both hemispheres 575.7
2307 Male, age 80, both hemispheres 469.8
Paramedian reticular nucleus
nTPM: 813.3
2050 Female, age 85, both hemispheres 1058.5
2057 Male, age 80, both hemispheres 810.8
2313 Male, age 61, both hemispheres 707.6
2052 Male, age 76, both hemispheres 676.3
Parvicellular reticular nuclei
nTPM: 687.1
2119 Male, age 80, both hemispheres 806.5
2095 Male, age 76, both hemispheres 674.4
2558 Male, age 74, both hemispheres 580.5
Parvicellular reticular nuclei, medullary
nTPM: 816.8
2091 Female, age 85, both hemispheres 897.0
2189 Female, age 91, both hemispheres 889.2
2181 Male, age 80, left hemisphere 664.1
Pedunculopontine tegmental nucleus
nTPM: 762.2
2334 Male, age 80, both hemispheres 783.3
2338 Male, age 61, both hemispheres 778.8
1921 Female, age 85, both hemispheres 724.4
Peritrigeminal nucleus
nTPM: 807.7
2067 Female, age 85, both hemispheres 907.3
2179 Male, age 61, both hemispheres 768.1
2136 Male, age 76, both hemispheres 747.6
Pontine nuclei
nTPM: 883.7
1863 Male, age 55, unknown 1264.8
2787 Female, age 85, both hemispheres 1130.5
2109 Female, age 72, unknown 1007.1
2727 Male, age 61, right hemisphere 850.0
2454 Male, age 74, left hemisphere 821.1
1968 Male, age 76, left hemisphere 726.5
2319 Female, age 91, both hemispheres 654.9
2115 Male, age 80, left hemisphere 614.9
Pontine raphe nucleus
nTPM: 834.5
2122 Female, age 85, midline 953.6
2853 Male, age 76, midline 715.4
Posteroventral cochlear nucleus
nTPM: 716.1
2752 Female, age 85, both hemispheres 881.9
2341 Male, age 80, both hemispheres 721.1
2371 Male, age 61, both hemispheres 706.8
2135 Female, age 91, both hemispheres 653.8
2070 Male, age 76, both hemispheres 616.7
Prepositus hypoglossal nucleus
nTPM: 841.7
2855 Female, age 85, right hemisphere 953.9
2086 Male, age 80, both hemispheres 729.5
Principal sensory trigeminal nucleus
nTPM: 727.3
2008 Male, age 80, left hemisphere 790.1
2158 Male, age 61, both hemispheres 771.9
2324 Male, age 76, both hemispheres 712.1
2367 Female, age 91, left hemisphere 635.0
Reticular pontine nucleus, caudal
nTPM: 676.5
2092 Male, age 76, both hemispheres 725.0
2559 Male, age 74, both hemispheres 711.9
2332 Male, age 80, right hemisphere 641.0
2457 Female, age 91, both hemispheres 628.1
Reticular pontine nucleus, oral
nTPM: 785.4
2361 Male, age 74, both hemispheres 942.6
2012 Female, age 85, both hemispheres 861.2
1939 Male, age 80, both hemispheres 839.9
2167 Male, age 76, both hemispheres 669.0
2366 Female, age 91, both hemispheres 614.4
Reticulotegmental nucleus
nTPM: 680.5
2322 Female, age 91, both hemispheres 714.6
2325 Male, age 76, both hemispheres 706.8
2333 Male, age 80, both hemispheres 657.3
2452 Male, age 74, both hemispheres 643.3
Spinal trigeminal nucleus, caudal
nTPM: 692.1
2390 Female, age 91, both hemispheres 970.4
2447 Male, age 76, both hemispheres 663.9
2312 Male, age 61, both hemispheres 637.5
2308 Male, age 80, both hemispheres 594.9
2642 Male, age 74, both hemispheres 594.0
Spinal trigeminal nucleus, interpolar
nTPM: 866.1
2066 Male, age 76, right hemisphere 1057.1
2625 Male, age 61, both hemispheres 982.7
2033 Male, age 80, both hemispheres 794.9
2386 Female, age 85, both hemispheres 762.0
2389 Female, age 91, both hemispheres 733.6
Spinal trigeminal nucleus, oral
nTPM: 708.3
2737 Female, age 85, both hemispheres 852.4
2164 Male, age 80, both hemispheres 736.5
1978 Male, age 76, both hemispheres 536.2
Spinal vestibular nucleus
nTPM: 733.8
2806 Female, age 85, both hemispheres 827.8
2186 Female, age 91, both hemispheres 812.6
2780 Male, age 80, both hemispheres 812.3
2796 Male, age 61, both hemispheres 652.8
2384 Male, age 74, both hemispheres 650.8
2748 Male, age 76, both hemispheres 646.7
Subcoeruleus area
nTPM: 699.9
1958 Male, age 80, both hemispheres 825.9
2323 Female, age 91, left hemisphere 790.4
2369 Female, age 85, left hemisphere 691.8
2451 Male, age 74, both hemispheres 614.6
2089 Male, age 76, left hemisphere 576.8
Superior olive
nTPM: 766.2
2364 Male, age 74, right hemisphere 974.1
1875 Female, age 85, both hemispheres 973.8
2020 Male, age 76, both hemispheres 667.6
2329 Male, age 80, right hemisphere 632.6
2561 Female, age 91, both hemispheres 582.7
Superior vestibular nucleus
nTPM: 820.8
2383 Male, age 74, both hemispheres 991.0
2015 Male, age 80, both hemispheres 841.7
2061 Male, age 76, both hemispheres 629.8
Ventral medullary reticular nucleus
nTPM: 632.4
2372 Male, age 61, both hemispheres 693.3
2060 Male, age 76, both hemispheres 571.4
Ventral periolivary nuclei
nTPM: 775.5
2130 Female, age 85, both hemispheres 1046.3
2165 Male, age 80, both hemispheres 813.6
2023 Male, age 76, both hemispheres 681.8
2794 Female, age 91, left hemisphere 560.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 759.6
2741 Female, age 85, both hemispheres 909.0
1986 Male, age 76, both hemispheres 812.0
2180 Male, age 61, both hemispheres 740.7
2302 Female, age 91, both hemispheres 682.5
2118 Male, age 80, both hemispheres 653.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 730.5
2840 Female, age 85, both hemispheres 895.1
2449 Male, age 74, both hemispheres 812.4
2359 Male, age 61, both hemispheres 754.9
1959 Male, age 76, both hemispheres 678.6
2161 Male, age 80, both hemispheres 672.7
2456 Female, age 91, both hemispheres 569.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 2183.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1523.3
FF:10165-103B3 76 years, female 1702.4
FF:10182-103D2 60 years, female 1344.2
Medulla oblongata
Scaled Tags Per Million: 1167.1
FF:10155-103A2 76 years, female 1572.8
FF:10038-101F2 18-64 years, mixed 1101.0
FF:10174-103C3 60 years, female 827.6
Pons
Scaled Tags Per Million: 2183.5
FF:10033-101E6 18-54 years, mixed 2183.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 1581.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 1267.1
Samples: 4

Max nTPM: 1312.5
Min nTPM: 1211.3
Sample A Female 1312.5
Sample B Female 1269.7
Sample C Male 1211.3
Sample D Male 1275.0
Pons
nTPM: 1581.1
Samples: 4

Max nTPM: 1739.1
Min nTPM: 1345.6
Sample A Female 1739.1
Sample B Female 1345.6
Sample C Male 1600.0
Sample D Male 1639.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 1872.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1872.8
Samples: 4

Max nTPM: 1970.1
Min nTPM: 1732.4
Sample A Male 1732.4
Sample B Male 1919.9
Sample C Female 1868.7
Sample D Female 1970.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 18.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 18.2
75694450 Antisense, RP_060518_03_G08, Mouse strain C57BL/6J (56 days, male) 18.2
Pons
Expression energy: 17.0
75694450 Antisense, RP_060518_03_G08, Mouse strain C57BL/6J (56 days, male) 17.0

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