HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:165.9 nTPM
HPA Brain:224.9 nTPM
GTEx:165.9 nTPM
FANTOM5:1488.9 Scaled Tags Per Million
Pig:327.4 nTPM
Mouse:306.4 nTPM
Allen mouse:8.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006773Antibody HPA016965Antibody CAB005163
Glial cells LowNot detectedLow
Neuronal cells HighMediumMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 224.9
Sample id Sample description nTPM
Hippocampus
nTPM: 221.8
1898 Male, age 80, left hemisphere 261.0
2621 Female, age 67, right hemisphere 225.6
2529 Female, age 94, left hemisphere 222.9
1855 Male, age 76, left hemisphere 218.4
2148 Female, age 91, left hemisphere 207.4
1911 Female, age 85, right hemisphere 195.7
Dentate gyrus
nTPM: 205.4
2010 Male, age 76, both hemispheres 237.6
2530 Female, age 94, left hemisphere 227.5
1927 Female, age 91, both hemispheres 217.0
2528 Male, age 74, both hemispheres 198.8
2246 Female, age 85, both hemispheres 192.6
2531 Female, age 67, both hemispheres 159.0
Entorhinal gyrus
nTPM: 202.4
2117 Female, age 91, right hemisphere 227.5
1938 Female, age 85, left hemisphere 212.2
1787 Male, age 76, left hemisphere 206.2
2764 Male, age 80, right hemisphere 206.0
2613 Female, age 94, left hemisphere 185.0
2686 Male, age 75, right hemisphere 177.6
Hippocampus, CA1
nTPM: 220.0
2749 Male, age 80, left hemisphere 309.7
1873 Female, age 85, both hemispheres 241.2
2527 Male, age 74, both hemispheres 205.6
2045 Male, age 76, both hemispheres 172.4
2082 Female, age 91, right hemisphere 170.9
Hippocampus, CA2
nTPM: 223.1
1963 Male, age 80, left hemisphere 265.0
1892 Male, age 76, both hemispheres 264.3
2249 Male, age 74, both hemispheres 216.4
1940 Female, age 85, left hemisphere 204.9
2437 Female, age 94, left hemisphere 204.6
2113 Female, age 91, right hemisphere 183.6
Hippocampus, CA3
nTPM: 224.9
2436 Male, age 74, both hemispheres 288.5
1867 Male, age 76, both hemispheres 244.7
2137 Male, age 80, left hemisphere 243.4
1891 Female, age 85, both hemispheres 213.2
2620 Female, age 94, left hemisphere 189.7
2861 Female, age 67, both hemispheres 169.9
Parahippocampal cortex
nTPM: 203.7
1850 Male, age 80, both hemispheres 240.3
2692 Male, age 74, both hemispheres 217.7
1990 Female, age 91, right hemisphere 211.0
2532 Female, age 72, left hemisphere 210.9
1933 Female, age 85, both hemispheres 208.9
2250 Female, age 67, right hemisphere 208.9
2245 Female, age 91, both hemispheres 206.3
2018 Male, age 76, both hemispheres 191.3
2622 Female, age 67, right hemisphere 176.3
2693 Female, age 94, both hemispheres 165.8
Perirhinal gyrus
nTPM: 211.4
1847 Female, age 91, left hemisphere 228.2
1794 Male, age 80, right hemisphere 225.9
1841 Female, age 85, right hemisphere 224.0
2521 Female, age 94, right hemisphere 194.6
2848 Male, age 76, right hemisphere 184.1
Subiculum
nTPM: 212.5
2619 Male, age 74, both hemispheres 231.8
1901 Male, age 80, both hemispheres 225.5
2042 Male, age 76, both hemispheres 214.7
1977 Female, age 85, both hemispheres 212.9
2438 Female, age 94, left hemisphere 197.7
2729 Female, age 91, right hemisphere 192.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 165.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 165.9
Samples: 197

Max nTPM: 263.4
Min nTPM: 98.4
Std nTPM: 27.8
Median nTPM: 160.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 263.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 251.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 248.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 236.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 228.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 226.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 225.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 223.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 222.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 219.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 218.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1488.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1488.9
FF:10169-103B7 60 years, female 1950.4
FF:10153-102I9 76 years, female 1027.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 327.4
Pig sample Sample description nTPM
Subiculum
nTPM: 320.3
Samples: 4

Max nTPM: 395.6
Min nTPM: 283.9
Sample A Female 395.6
Sample B Female 286.2
Sample C Male 283.9
Sample D Male 315.3
Dorsal hippocampus
nTPM: 327.4
Samples: 4

Max nTPM: 402.1
Min nTPM: 259.2
Sample A Female 402.1
Sample B Female 297.4
Sample C Male 351.0
Sample D Male 259.2
Entorhinal cortex
nTPM: 324.6
Samples: 4

Max nTPM: 348.3
Min nTPM: 287.8
Sample A Female 336.4
Sample B Female 348.3
Sample C Male 325.9
Sample D Male 287.8
Ventral hippocampus
nTPM: 292.8
Samples: 4

Max nTPM: 329.6
Min nTPM: 242.2
Sample A Female 329.6
Sample B Female 242.2
Sample C Male 303.9
Sample D Male 295.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 306.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 292.0
Samples: 4

Max nTPM: 300.6
Min nTPM: 285.2
Sample A Male 285.2
Sample B Male 289.7
Sample C Female 292.4
Sample D Female 300.6
Hippocampal formation
nTPM: 306.4
Samples: 4

Max nTPM: 322.0
Min nTPM: 293.1
Sample A Male 301.7
Sample B Male 308.8
Sample C Female 322.0
Sample D Female 293.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.7
69671965 Antisense, RP_050428_02_G01, Mouse strain C57BL/6J (56 days, male) 17.4
70795766 Antisense, RP_050712_01_H11, Mouse strain C57BL/6J (56 days, male) 0.1

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