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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:196.7 nTPM
GTEx:196.7 nTPM
FANTOM5:1755.5 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006773Antibody HPA016965Antibody CAB005163
Squamous epithelial cells LowNot detectedNot detected





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

196.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 196.7
Samples: 156

Max nTPM: 386.8
Min nTPM: 74.1
Std nTPM: 61.0
Median nTPM: 186.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 386.8
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 337.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 332.7
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 328.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 319.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 315.1
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 312.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 311.3
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 307.4
GTEX-14PKU-1326-SM-6871B 40-49 years, female 305.2
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 303.0
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 302.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 300.8
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 298.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 295.8
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 292.2
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 289.0
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 288.4
GTEX-11I78-2026-SM-5987C 50-59 years, female 283.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 280.7
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 275.2
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 273.1
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 269.6
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 268.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 265.8
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 265.3
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 254.1
GTEX-S341-1226-SM-4AD5S 40-49 years, female 251.5
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 249.9
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 248.3
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 247.8
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 246.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 244.3
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 244.2
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 243.9
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 243.1
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 240.8
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 239.7
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 238.2
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 236.5
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 231.0
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 230.8
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 230.7
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 230.2
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 229.9
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 229.7
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 228.7
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 227.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 220.3
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 219.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 219.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 218.7
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 218.5
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 217.7
GTEX-1C475-0526-SM-793AC 40-49 years, female 215.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 214.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 214.3
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 208.9
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 208.0
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 207.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 206.2
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 206.1
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 204.2
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 203.4
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 201.9
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 201.8
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 201.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 197.2
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 197.1
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 196.1
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 194.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 194.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 193.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 192.6
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 191.7
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 190.6
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 187.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 186.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 185.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 185.2
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 184.8
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 184.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 182.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 179.4
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 177.9
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 177.3
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 176.4
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 175.9
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 174.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 173.2
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 173.0
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 171.6
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 170.3
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 169.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 169.5
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 167.2
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 166.2
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 165.3
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 165.2
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 164.6
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 164.5
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 164.1
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 163.5
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 162.5
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 162.2
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 162.1
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 160.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 158.7
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 158.6
GTEX-16NPV-2526-SM-6M483 50-59 years, female 157.7
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 157.6
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 157.4
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 157.0
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 155.4
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 152.3
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 151.0
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 149.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 146.9
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 146.5
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 146.3
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 144.1
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 143.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 143.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 143.0
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 140.3
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 140.3
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 139.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 139.7
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 139.3
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 138.1
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 135.5
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 135.2
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 133.4
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 132.9
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 130.7
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 130.3
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 128.4
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 128.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 128.3
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 127.8
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 124.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 124.3
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 122.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 121.5
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 121.4
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 121.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 120.4
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 117.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 116.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 110.5
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 109.0
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 104.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 103.9
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 103.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 89.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 74.1
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1755.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 1755.5
FF:10204-103F6 68 years, female 1755.5

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