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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:53.2 nTPM
HPA Brain:88.0 nTPM
GTEx:53.2 nTPM
FANTOM5:274.8 Scaled Tags Per Million
Pig:322.3 nTPM
Mouse:410.5 nTPM

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 76.4
1857 Female, age 85, left hemisphere 97.7
2290 Female, age 72, unknown 91.7
2846 Female, age 79, unknown 86.4
1854 Male, age 80, left hemisphere 85.9
1781 Male, age 74, unknown 74.0
2289 Male, age 61, right hemisphere 69.7
2288 Male, age 75, left hemisphere 56.3
2481 Female, age 94, left hemisphere 49.7
Globus pallidus, externus
nTPM: 21.8
2772 Female, age 79, unknown 28.6
2395 Male, age 75, both hemispheres 25.3
1996 Male, age 80, right hemisphere 21.0
2646 Male, age 61, right hemisphere 18.5
2567 Female, age 72, unknown 15.6
Globus pallidus, internus
nTPM: 21.9
2483 Female, age 94, right hemisphere 36.7
1818 Male, age 74, unknown 30.9
2287 Male, age 75, right hemisphere 23.7
2037 Male, age 80, right hemisphere 22.6
2566 Female, age 72, unknown 18.2
2778 Female, age 91, both hemispheres 11.6
2111 Female, age 85, right hemisphere 9.5
Nucleus accumbens
nTPM: 88.0
1856 Female, age 91, right hemisphere 161.0
2824 Male, age 61, right hemisphere 123.5
1783 Male, age 74, unknown 97.3
1806 Female, age 85, left hemisphere 92.2
2698 Female, age 72, unknown 82.7
2286 Male, age 75, left hemisphere 61.5
2732 Male, age 80, right hemisphere 44.4
2391 Female, age 94, left hemisphere 41.6
Nucleus basalis of Meynert
nTPM: 51.7
2484 Female, age 94, left hemisphere 75.2
2393 Male, age 80, right hemisphere 69.1
2821 Male, age 75, both hemispheres 42.1
2569 Male, age 61, both hemispheres 20.2
Nucleus of the diagonal band
nTPM: 66.6
2195 Female, age 85, both hemispheres 79.2
1812 Female, age 91, both hemispheres 78.5
2775 Male, age 80, right hemisphere 75.9
2029 Male, age 61, right hemisphere 59.2
1979 Male, age 74, unknown 40.1
Putamen
nTPM: 75.3
1838 Male, age 80, right hemisphere 117.1
1937 Female, age 91, right hemisphere 112.3
2466 Female, age 79, unknown 88.2
1829 Male, age 74, unknown 82.5
2482 Female, age 94, left hemisphere 50.9
2489 Female, age 72, unknown 45.7
2647 Male, age 75, left hemisphere 30.4
Septal nuclei
nTPM: 59.7
1960 Male, age 74, unknown 88.8
2031 Female, age 72, unknown 80.4
2629 Female, age 94, right hemisphere 69.9
2009 Female, age 91, both hemispheres 68.4
2059 Female, age 85, both hemispheres 49.3
2394 Male, age 61, left hemisphere 33.7
2199 Male, age 80, right hemisphere 27.6
Stria terminalis, bed nucleus
nTPM: 67.0
2486 Female, age 94, both hemispheres 84.0
1974 Female, age 91, both hemispheres 70.6
2201 Male, age 74, unknown 46.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 36.2
Samples: 246

Max nTPM: 183.1
Min nTPM: 4.4
Std nTPM: 25.6
Median nTPM: 30.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 183.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 113.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 107.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 106.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 99.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 97.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 92.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 90.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 89.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 88.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 83.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 83.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 82.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 80.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 78.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 77.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 77.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 76.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 76.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 75.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 75.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 74.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 74.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 72.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 72.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 70.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 70.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 70.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 70.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 69.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 68.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 67.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 64.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 63.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 63.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 62.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 60.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 60.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 59.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 59.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 58.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 58.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 58.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 57.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 57.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 57.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 56.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 56.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 56.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 55.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 55.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 55.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 54.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 53.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 53.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 53.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 53.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 53.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 53.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 52.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 52.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 52.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 51.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 50.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 50.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 49.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 49.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 48.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 47.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 47.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 47.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 46.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 46.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 46.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 45.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 45.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 45.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 45.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 44.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 43.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 43.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 43.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 42.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 42.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 42.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 42.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 42.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 41.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 40.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 40.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 40.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 40.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 40.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 39.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 39.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 39.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 39.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 39.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 38.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 38.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 38.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 38.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 37.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 37.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 37.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 37.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 36.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 36.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 35.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 34.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 34.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 34.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 33.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 33.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 32.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 32.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 32.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 31.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 31.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 31.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 31.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 31.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 30.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 30.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 30.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 29.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 29.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 29.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 28.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 28.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 28.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 28.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 28.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 27.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 27.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 27.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 27.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 26.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 25.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 25.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 25.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 25.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 24.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 24.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 24.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 24.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 24.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 24.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 24.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 24.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 24.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 23.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 23.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 23.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 23.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 22.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 22.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 21.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 21.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 21.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 21.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 21.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 20.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 20.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 20.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 19.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 19.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 18.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 18.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 18.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 18.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 18.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 17.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 17.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 17.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 17.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 16.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 16.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 16.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 15.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 15.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 15.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 15.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 15.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 15.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 15.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 15.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 14.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 14.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 14.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 13.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 13.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 13.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 13.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 13.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 13.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 12.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 12.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 12.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 12.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 12.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 12.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 12.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 11.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 11.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 11.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 11.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 11.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 11.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 10.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 10.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 10.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 10.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 10.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 10.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 10.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 9.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 9.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 9.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 9.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 9.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 9.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 9.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 9.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 9.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 9.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 8.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 8.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 8.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 8.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 8.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 8.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 7.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 7.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 7.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 7.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 7.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 6.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 6.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 6.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 5.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 5.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 5.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 4.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 4.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 53.2
Samples: 246

Max nTPM: 140.8
Min nTPM: 2.5
Std nTPM: 31.4
Median nTPM: 53.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 140.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 138.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 128.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 121.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 117.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 115.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 114.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 113.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 112.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 112.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 111.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 110.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 109.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 108.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 107.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 104.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 103.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 101.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 100.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 99.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 97.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 97.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 97.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 96.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 96.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 96.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 94.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 93.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 93.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 93.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 93.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 92.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 92.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 91.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 91.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 91.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 91.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 89.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 89.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 89.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 88.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 87.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 87.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 85.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 84.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 83.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 83.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 82.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 81.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 80.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 79.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 79.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 78.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 78.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 77.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 77.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 76.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 75.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 74.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 74.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 73.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 73.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 73.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 72.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 72.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 72.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 71.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 70.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 70.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 70.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 69.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 69.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 69.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 68.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 68.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 68.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 68.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 68.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 67.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 67.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 67.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 67.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 66.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 66.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 66.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 65.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 65.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 64.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 64.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 64.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 64.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 64.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 63.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 63.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 63.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 62.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 62.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 61.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 61.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 60.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 60.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 60.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 59.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 59.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 59.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 59.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 58.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 58.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 58.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 57.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 57.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 57.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 57.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 56.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 56.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 56.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 55.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 55.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 55.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 54.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 54.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 53.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 53.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 53.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 52.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 52.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 51.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 50.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 49.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 49.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 48.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 48.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 48.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 48.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 48.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 48.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 47.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 47.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 47.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 47.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 47.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 47.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 47.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 47.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 46.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 46.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 45.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 44.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 43.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 43.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 42.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 42.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 41.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 40.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 40.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 40.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 39.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 38.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 38.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 38.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 37.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 37.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 36.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 36.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 34.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 34.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 34.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 34.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 32.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 32.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 31.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 31.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 30.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 29.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 29.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 29.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 28.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 27.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 27.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 27.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 26.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 24.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 23.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 23.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 23.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 23.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 22.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 22.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 21.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 21.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 21.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 21.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 21.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 20.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 20.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 20.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 19.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 18.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 18.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 18.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 18.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 18.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 17.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 17.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 17.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 17.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 16.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 15.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 15.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 15.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 15.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 14.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 14.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 13.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 13.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 13.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 13.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 12.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 12.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 12.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 12.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 12.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 12.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 12.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 12.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 12.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 11.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 11.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 11.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 10.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 10.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 10.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 10.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 9.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 9.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 9.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 8.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 8.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 7.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 6.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 6.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 6.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 5.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 5.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 3.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 2.5
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 32.7
Samples: 205

Max nTPM: 114.9
Min nTPM: 2.8
Std nTPM: 23.3
Median nTPM: 26.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 114.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 91.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 88.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 85.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 85.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 85.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 85.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 85.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 83.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 82.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 81.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 80.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 79.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 76.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 75.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 75.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 73.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 71.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 69.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 68.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 67.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 66.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 66.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 64.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 64.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 64.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 64.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 64.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 63.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 63.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 61.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 59.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 57.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 57.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 56.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 56.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 56.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 56.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 55.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 55.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 54.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 53.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 53.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 52.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 50.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 49.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 48.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 48.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 47.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 47.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 47.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 46.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 45.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 45.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 45.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 44.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 43.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 42.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 42.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 42.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 42.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 41.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 41.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 41.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 39.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 39.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 39.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 38.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 38.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 37.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 37.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 37.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 36.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 36.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 36.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 36.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 35.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 35.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 35.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 35.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 34.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 34.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 33.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 33.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 32.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 32.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 31.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 31.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 30.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 30.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 30.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 29.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 29.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 29.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 29.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 28.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 28.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 28.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 28.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 27.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 27.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 27.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 26.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 26.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 26.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 26.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 26.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 26.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 26.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 25.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 25.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 24.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 23.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 23.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 23.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 23.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 23.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 22.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 21.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 21.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 21.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 21.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 21.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 20.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 20.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 20.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 20.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 20.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 19.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 19.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 19.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 18.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 18.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 18.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 18.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 16.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 16.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 16.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 16.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 16.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 15.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 15.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 15.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 15.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 15.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 14.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 14.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 14.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 14.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 14.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 14.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 13.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 13.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 13.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 12.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 12.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 12.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 12.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 12.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 12.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 11.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 11.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 11.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 11.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 11.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 10.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 10.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 10.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 10.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 10.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 10.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 10.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 10.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 9.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 9.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 9.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 9.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 9.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 9.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 9.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 8.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 8.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 8.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 8.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 8.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 7.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 7.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 7.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 6.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 6.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 6.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 6.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 6.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 6.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 6.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 6.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 5.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 5.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 5.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 5.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 5.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 3.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 2.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 2.8
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

274.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 185.0
FF:10164-103B2 76 years, female 185.0
Nucleus accumbens
Scaled Tags Per Million: 198.5
FF:10037-101F1 23-56 years, mixed 198.5
Putamen
Scaled Tags Per Million: 274.8
FF:10176-103C5 60 years, female 274.8
Globus pallidus
Scaled Tags Per Million: 80.4
FF:10175-103C4 60 years, female 138.9
FF:10161-103A8 76 years, female 22.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

322.3
Pig sample Sample description nTPM
Caudate
nTPM: 311.9
Samples: 4

Max nTPM: 361.9
Min nTPM: 264.7
Sample A Female 264.7
Sample B Female 298.7
Sample C Male 361.9
Sample D Male 322.3
Putamen
nTPM: 322.3
Samples: 4

Max nTPM: 526.7
Min nTPM: 122.3
Sample A Female 122.3
Sample B Female 308.7
Sample C Male 526.7
Sample D Male 331.6
Septum
nTPM: 150.7
Samples: 4

Max nTPM: 237.1
Min nTPM: 68.0
Sample A Female 237.1
Sample B Female 188.3
Sample C Male 109.4
Sample D Male 68.0
Ventral pallidum
nTPM: 208.6
Samples: 4

Max nTPM: 286.5
Min nTPM: 131.0
Sample A Female 286.5
Sample B Female 190.3
Sample C Male 131.0
Sample D Male 226.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

410.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 410.5
Samples: 4

Max nTPM: 445.1
Min nTPM: 356.1
Sample A Male 445.1
Sample B Male 441.6
Sample C Female 356.1
Sample D Female 399.2
Septum
nTPM: 166.7
Samples: 4

Max nTPM: 177.2
Min nTPM: 154.2
Sample A Male 175.7
Sample B Male 177.2
Sample C Female 154.2
Sample D Female 159.5
Ventral forebrain
nTPM: 268.3
Samples: 4

Max nTPM: 285.4
Min nTPM: 257.9
Sample A Male 265.6
Sample B Male 264.3
Sample C Female 285.4
Sample D Female 257.9

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